Protein–RNA interactions for Protein: Q03308

VPS16, Vacuolar protein sorting-associated protein 16, yeastyeast

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS16Q03308 YEL076C-AYEL076C-A 651 nt11.04□□□□□ -0.64
VPS16Q03308 YEL076CYEL076C 651 nt11.04□□□□□ -0.64
VPS16Q03308 YLR464WYLR464W 651 nt11.04□□□□□ -0.64
VPS16Q03308 RPM1RPM1 483 nt11.04□□□□□ -0.64
VPS16Q03308 FTR1YER145C 1215 nt11.03□□□□□ -0.64
VPS16Q03308 DPS1YLL018C 1674 nt11.02□□□□□ -0.64
VPS16Q03308 AAC1YMR056C 930 nt11.02□□□□□ -0.65
VPS16Q03308 TRM5YHR070W 1500 nt11.02□□□□□ -0.65
VPS16Q03308 LPX1YOR084W 1164 nt11.01□□□□□ -0.65
VPS16Q03308 GAL1YBR020W 1587 nt11□□□□□ -0.65
VPS16Q03308 DDR2YOL052C-A 186 nt10.99□□□□□ -0.65
VPS16Q03308 ERV46YAL042W 1248 nt10.98□□□□□ -0.65
VPS16Q03308 YKR040CYKR040C 504 nt10.98□□□□□ -0.65
VPS16Q03308 DIC1YLR348C 897 nt10.96□□□□□ -0.65
VPS16Q03308 NAR1YNL240C 1476 nt10.94□□□□□ -0.66
VPS16Q03308 YDL086C-AYDL086C-A 435 nt10.94□□□□□ -0.66
VPS16Q03308 BMT6YLR063W 1098 nt10.94□□□□□ -0.66
VPS16Q03308 BNA2YJR078W 1362 nt10.93□□□□□ -0.66
VPS16Q03308 YKR005CYKR005C 1578 nt10.92□□□□□ -0.66
VPS16Q03308 YGR139WYGR139W 339 nt10.91□□□□□ -0.66
VPS16Q03308 MET8YBR213W 825 nt10.91□□□□□ -0.66
VPS16Q03308 DUS1YML080W 1272 nt10.89□□□□□ -0.67
VPS16Q03308 ANP1YEL036C 1503 nt10.89□□□□□ -0.67
VPS16Q03308 CLB6YGR109C 1143 nt10.88□□□□□ -0.67
VPS16Q03308 AGP1YCL025C 1902 nt10.88□□□□□ -0.67
VPS16Q03308 BIO5YNR056C 1686 nt10.87□□□□□ -0.67
VPS16Q03308 SNF1YDR477W 1902 nt10.87□□□□□ -0.67
VPS16Q03308 WSC2YNL283C 1512 nt10.86□□□□□ -0.67
VPS16Q03308 Q0010Q0010 387 nt10.84□□□□□ -0.67
VPS16Q03308 MIC12YBR262C 321 nt10.84□□□□□ -0.67
VPS16Q03308 YCL074WYCL074W 927 nt10.83□□□□□ -0.68
VPS16Q03308 YDR524C-BYDR524C-B 201 nt10.81□□□□□ -0.68
VPS16Q03308 YGR259CYGR259C 441 nt10.81□□□□□ -0.68
VPS16Q03308 AQY1YPR192W 918 nt10.81□□□□□ -0.68
VPS16Q03308 STB1YNL309W 1263 nt10.8□□□□□ -0.68
VPS16Q03308 FEN2YCR028C 1539 nt10.79□□□□□ -0.68
VPS16Q03308 HHO1YPL127C 777 nt10.78□□□□□ -0.68
VPS16Q03308 SPC25YER018C 666 nt10.75□□□□□ -0.69
VPS16Q03308 PTH1YHR189W 573 nt10.75□□□□□ -0.69
VPS16Q03308 YJR154WYJR154W 1041 nt10.74□□□□□ -0.69
VPS16Q03308 SPP1YPL138C 1062 nt10.74□□□□□ -0.69
VPS16Q03308 PBP1YGR178C 2169 nt10.74□□□□□ -0.69
VPS16Q03308 IRC24YIR036C 792 nt10.73□□□□□ -0.69
VPS16Q03308 MRPL8YJL063C 717 nt10.73□□□□□ -0.69
VPS16Q03308 GPI16YHR188C 1833 nt10.72□□□□□ -0.69
VPS16Q03308 CYT2YKL087C 675 nt10.71□□□□□ -0.69
VPS16Q03308 YIR016WYIR016W 798 nt10.7□□□□□ -0.7
VPS16Q03308 YLR179CYLR179C 606 nt10.7□□□□□ -0.7
VPS16Q03308 TIM23YNR017W 669 nt10.69□□□□□ -0.7
VPS16Q03308 VPS60YDR486C 690 nt10.68□□□□□ -0.7
VPS16Q03308 RDN18-1RDN18-1 1800 nt10.67□□□□□ -0.7
VPS16Q03308 RDN18-2RDN18-2 1800 nt10.67□□□□□ -0.7
VPS16Q03308 XDJ1YLR090W 1380 nt10.66□□□□□ -0.7
VPS16Q03308 ADO1YJR105W 1023 nt10.64□□□□□ -0.71
VPS16Q03308 YLR235CYLR235C 399 nt10.64□□□□□ -0.71
VPS16Q03308 DUT1YBR252W 444 nt10.64□□□□□ -0.71
VPS16Q03308 CCT4YDL143W 1587 nt10.64□□□□□ -0.71
VPS16Q03308 YGR201CYGR201C 678 nt10.63□□□□□ -0.71
VPS16Q03308 STR3YGL184C 1398 nt10.63□□□□□ -0.71
VPS16Q03308 ALG3YBL082C 1377 nt10.63□□□□□ -0.71
VPS16Q03308 SWC5YBR231C 912 nt10.6□□□□□ -0.71
VPS16Q03308 RTG1YOL067C 534 nt10.59□□□□□ -0.71
VPS16Q03308 AQY2YLL052C 450 nt10.58□□□□□ -0.72
VPS16Q03308 AHT1YHR093W 549 nt10.56□□□□□ -0.72
VPS16Q03308 CMP2YML057W 1815 nt10.54□□□□□ -0.72
VPS16Q03308 AVT6YER119C 1347 nt10.52□□□□□ -0.73
VPS16Q03308 CSM2YIL132C 642 nt10.5□□□□□ -0.73
VPS16Q03308 GOR1YNL274C 1053 nt10.5□□□□□ -0.73
VPS16Q03308 YAT1YAR035W 2064 nt10.49□□□□□ -0.73
VPS16Q03308 YDR510C-AYDR510C-A 117 nt10.49□□□□□ -0.73
VPS16Q03308 HUA1YGR268C 597 nt10.49□□□□□ -0.73
VPS16Q03308 YKL030WYKL030W 606 nt10.48□□□□□ -0.73
VPS16Q03308 RTN2YDL204W 1182 nt10.47□□□□□ -0.73
VPS16Q03308 YPR064WYPR064W 420 nt10.47□□□□□ -0.73
VPS16Q03308 GDH3YAL062W 1374 nt10.47□□□□□ -0.73
VPS16Q03308 TAD3YLR316C 969 nt10.39□□□□□ -0.75
VPS16Q03308 NDI1YML120C 1542 nt10.37□□□□□ -0.75
VPS16Q03308 BSP1YPR171W 1731 nt10.35□□□□□ -0.75
VPS16Q03308 SHM2YLR058C 1410 nt10.33□□□□□ -0.76
VPS16Q03308 PAB1YER165W 1734 nt10.33□□□□□ -0.76
VPS16Q03308 PLB1YMR008C 1995 nt10.3□□□□□ -0.76
VPS16Q03308 BDH1YAL060W 1149 nt10.29□□□□□ -0.76
VPS16Q03308 HSL7YBR133C 2484 nt10.29□□□□□ -0.76
VPS16Q03308 YLR415CYLR415C 339 nt10.28□□□□□ -0.76
VPS16Q03308 HIF1YLL022C 1158 nt10.27□□□□□ -0.77
VPS16Q03308 PRM5YIL117C 957 nt10.26□□□□□ -0.77
VPS16Q03308 SPT20YOL148C 1815 nt10.26□□□□□ -0.77
VPS16Q03308 RSC4YKR008W 1878 nt10.25□□□□□ -0.77
VPS16Q03308 TIM17YJL143W 477 nt10.25□□□□□ -0.77
VPS16Q03308 DAT1YML113W 747 nt10.23□□□□□ -0.77
VPS16Q03308 INA1YLR413W 2028 nt10.23□□□□□ -0.77
VPS16Q03308 ALD4YOR374W 1560 nt10.22□□□□□ -0.77
VPS16Q03308 UBX6YJL048C 1191 nt10.22□□□□□ -0.77
VPS16Q03308 RPC82YPR190C 1965 nt10.22□□□□□ -0.77
VPS16Q03308 YDR094WYDR094W 336 nt10.21□□□□□ -0.77
VPS16Q03308 tL(GAG)GtL(GAG)G 82 nt10.21□□□□□ -0.77
VPS16Q03308 NBP35YGL091C 987 nt10.21□□□□□ -0.77
VPS16Q03308 NIT1YIL164C 600 nt10.2□□□□□ -0.78
VPS16Q03308 ARP6YLR085C 1317 nt10.19□□□□□ -0.78
VPS16Q03308 YCR102CYCR102C 1107 nt10.18□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms