Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 TRM5YHR070W 1500 nt9.22□□□□□ -0.93
VPS28Q02767 DIC1YLR348C 897 nt9.21□□□□□ -0.94
VPS28Q02767 DDR2YOL052C-A 186 nt9.19□□□□□ -0.94
VPS28Q02767 YDL086C-AYDL086C-A 435 nt9.17□□□□□ -0.94
VPS28Q02767 PRP4YPR178W 1398 nt9.16□□□□□ -0.94
VPS28Q02767 ANP1YEL036C 1503 nt9.15□□□□□ -0.95
VPS28Q02767 YEL076C-AYEL076C-A 651 nt9.14□□□□□ -0.95
VPS28Q02767 YEL076CYEL076C 651 nt9.14□□□□□ -0.95
VPS28Q02767 YLR464WYLR464W 651 nt9.14□□□□□ -0.95
VPS28Q02767 AQY1YPR192W 918 nt9.13□□□□□ -0.95
VPS28Q02767 DPS1YLL018C 1674 nt9.1□□□□□ -0.95
VPS28Q02767 AAC1YMR056C 930 nt9.1□□□□□ -0.95
VPS28Q02767 MIC12YBR262C 321 nt9.1□□□□□ -0.95
VPS28Q02767 BNA2YJR078W 1362 nt9.1□□□□□ -0.95
VPS28Q02767 WSC2YNL283C 1512 nt9.06□□□□□ -0.96
VPS28Q02767 SPC25YER018C 666 nt9.06□□□□□ -0.96
VPS28Q02767 STB1YNL309W 1263 nt9.06□□□□□ -0.96
VPS28Q02767 NAR1YNL240C 1476 nt9.06□□□□□ -0.96
VPS28Q02767 AGP1YCL025C 1902 nt9.05□□□□□ -0.96
VPS28Q02767 YDR524C-BYDR524C-B 201 nt9.05□□□□□ -0.96
VPS28Q02767 FEN2YCR028C 1539 nt9.05□□□□□ -0.96
VPS28Q02767 YKR005CYKR005C 1578 nt9.04□□□□□ -0.96
VPS28Q02767 BMT6YLR063W 1098 nt9.03□□□□□ -0.96
VPS28Q02767 TIM23YNR017W 669 nt9.02□□□□□ -0.97
VPS28Q02767 GPI16YHR188C 1833 nt9.01□□□□□ -0.97
VPS28Q02767 YCL074WYCL074W 927 nt9.01□□□□□ -0.97
VPS28Q02767 PTH1YHR189W 573 nt9.01□□□□□ -0.97
VPS28Q02767 YLR235CYLR235C 399 nt9.01□□□□□ -0.97
VPS28Q02767 YLR179CYLR179C 606 nt8.99□□□□□ -0.97
VPS28Q02767 DUS1YML080W 1272 nt8.99□□□□□ -0.97
VPS28Q02767 YIR016WYIR016W 798 nt8.98□□□□□ -0.97
VPS28Q02767 HHO1YPL127C 777 nt8.98□□□□□ -0.97
VPS28Q02767 SNF1YDR477W 1902 nt8.97□□□□□ -0.97
VPS28Q02767 VPS60YDR486C 690 nt8.96□□□□□ -0.98
VPS28Q02767 BIO5YNR056C 1686 nt8.96□□□□□ -0.98
VPS28Q02767 YGR259CYGR259C 441 nt8.95□□□□□ -0.98
VPS28Q02767 CCT4YDL143W 1587 nt8.95□□□□□ -0.98
VPS28Q02767 AHT1YHR093W 549 nt8.94□□□□□ -0.98
VPS28Q02767 SPP1YPL138C 1062 nt8.94□□□□□ -0.98
VPS28Q02767 YGR201CYGR201C 678 nt8.93□□□□□ -0.98
VPS28Q02767 HSL7YBR133C 2484 nt8.93□□□□□ -0.98
VPS28Q02767 XDJ1YLR090W 1380 nt8.92□□□□□ -0.98
VPS28Q02767 IRC24YIR036C 792 nt8.92□□□□□ -0.98
VPS28Q02767 ALG3YBL082C 1377 nt8.91□□□□□ -0.98
VPS28Q02767 PBP1YGR178C 2169 nt8.89□□□□□ -0.99
VPS28Q02767 SWC5YBR231C 912 nt8.88□□□□□ -0.99
VPS28Q02767 RDN18-1RDN18-1 1800 nt8.88□□□□□ -0.99
VPS28Q02767 RDN18-2RDN18-2 1800 nt8.88□□□□□ -0.99
VPS28Q02767 CMP2YML057W 1815 nt8.88□□□□□ -0.99
VPS28Q02767 YKL030WYKL030W 606 nt8.87□□□□□ -0.99
VPS28Q02767 CYT2YKL087C 675 nt8.86□□□□□ -0.99
VPS28Q02767 STR3YGL184C 1398 nt8.86□□□□□ -0.99
VPS28Q02767 Q0182Q0182 405 nt8.85□□□□□ -0.99
VPS28Q02767 RPM1RPM1 483 nt8.85□□□□□ -0.99
VPS28Q02767 YPR064WYPR064W 420 nt8.84□□□□□ -0.99
VPS28Q02767 DUT1YBR252W 444 nt8.83□□□□□ -1
VPS28Q02767 RDN25-1RDN25-1 3396 nt8.8□□□□□ -1
VPS28Q02767 RDN25-2RDN25-2 3396 nt8.8□□□□□ -1
VPS28Q02767 TAD3YLR316C 969 nt8.79□□□□□ -1
VPS28Q02767 AVT6YER119C 1347 nt8.78□□□□□ -1
VPS28Q02767 GOR1YNL274C 1053 nt8.77□□□□□ -1.01
VPS28Q02767 MOT3YMR070W 1473 nt8.77□□□□□ -1.01
VPS28Q02767 AQY2YLL052C 450 nt8.76□□□□□ -1.01
VPS28Q02767 GDH3YAL062W 1374 nt8.75□□□□□ -1.01
VPS28Q02767 RTN2YDL204W 1182 nt8.74□□□□□ -1.01
VPS28Q02767 HEL2YDR266C 1920 nt8.74□□□□□ -1.01
VPS28Q02767 BDH1YAL060W 1149 nt8.71□□□□□ -1.02
VPS28Q02767 SHM2YLR058C 1410 nt8.67□□□□□ -1.02
VPS28Q02767 YLR415CYLR415C 339 nt8.67□□□□□ -1.02
VPS28Q02767 DAT1YML113W 747 nt8.63□□□□□ -1.03
VPS28Q02767 YAT1YAR035W 2064 nt8.62□□□□□ -1.03
VPS28Q02767 TIM17YJL143W 477 nt8.62□□□□□ -1.03
VPS28Q02767 RTG1YOL067C 534 nt8.62□□□□□ -1.03
VPS28Q02767 tL(GAG)GtL(GAG)G 82 nt8.6□□□□□ -1.03
VPS28Q02767 NIT1YIL164C 600 nt8.59□□□□□ -1.03
VPS28Q02767 YSP3YOR003W 1437 nt8.59□□□□□ -1.03
VPS28Q02767 ARP6YLR085C 1317 nt8.58□□□□□ -1.04
VPS28Q02767 NBP35YGL091C 987 nt8.58□□□□□ -1.04
VPS28Q02767 PLB1YMR008C 1995 nt8.58□□□□□ -1.04
VPS28Q02767 NDI1YML120C 1542 nt8.58□□□□□ -1.04
VPS28Q02767 YCR102CYCR102C 1107 nt8.55□□□□□ -1.04
VPS28Q02767 MET2YNL277W 1461 nt8.52□□□□□ -1.05
VPS28Q02767 HIF1YLL022C 1158 nt8.52□□□□□ -1.05
VPS28Q02767 SGT2YOR007C 1041 nt8.52□□□□□ -1.05
VPS28Q02767 PRM5YIL117C 957 nt8.51□□□□□ -1.05
VPS28Q02767 ALD4YOR374W 1560 nt8.51□□□□□ -1.05
VPS28Q02767 SPT20YOL148C 1815 nt8.47□□□□□ -1.05
VPS28Q02767 SFP1YLR403W 2052 nt8.46□□□□□ -1.05
VPS28Q02767 HUA1YGR268C 597 nt8.46□□□□□ -1.06
VPS28Q02767 YNL115CYNL115C 1935 nt8.46□□□□□ -1.06
VPS28Q02767 RPC82YPR190C 1965 nt8.44□□□□□ -1.06
VPS28Q02767 INA1YLR413W 2028 nt8.44□□□□□ -1.06
VPS28Q02767 UTR1YJR049C 1593 nt8.44□□□□□ -1.06
VPS28Q02767 LSC2YGR244C 1284 nt8.42□□□□□ -1.06
VPS28Q02767 PEX25YPL112C 1185 nt8.42□□□□□ -1.06
VPS28Q02767 TIR3YIL011W 810 nt8.41□□□□□ -1.06
VPS28Q02767 MAE1YKL029C 2010 nt8.41□□□□□ -1.06
VPS28Q02767 VPS75YNL246W 795 nt8.4□□□□□ -1.06
VPS28Q02767 GAP1YKR039W 1809 nt8.39□□□□□ -1.07
VPS28Q02767 RIM8YGL045W 1629 nt8.39□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms