Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 TRM5YHR070W 1500 nt9.78□□□□□ -0.84
ATG4P53867 YFL066CYFL066C 1179 nt9.77□□□□□ -0.85
ATG4P53867 PEX25YPL112C 1185 nt9.77□□□□□ -0.85
ATG4P53867 SEC11YIR022W 504 nt9.76□□□□□ -0.85
ATG4P53867 BDH1YAL060W 1149 nt9.76□□□□□ -0.85
ATG4P53867 SBA1YKL117W 651 nt9.75□□□□□ -0.85
ATG4P53867 YSP3YOR003W 1437 nt9.73□□□□□ -0.85
ATG4P53867 SPC25YER018C 666 nt9.73□□□□□ -0.85
ATG4P53867 STB1YNL309W 1263 nt9.73□□□□□ -0.85
ATG4P53867 PCH2YBR186W 1695 nt9.73□□□□□ -0.85
ATG4P53867 ATF2YGR177C 1608 nt9.72□□□□□ -0.85
ATG4P53867 GUT2YIL155C 1950 nt9.71□□□□□ -0.86
ATG4P53867 CCT4YDL143W 1587 nt9.71□□□□□ -0.86
ATG4P53867 UME6YDR207C 2511 nt9.71□□□□□ -0.86
ATG4P53867 YNL115CYNL115C 1935 nt9.7□□□□□ -0.86
ATG4P53867 YDR524C-BYDR524C-B 201 nt9.7□□□□□ -0.86
ATG4P53867 ERF2YLR246W 1080 nt9.7□□□□□ -0.86
ATG4P53867 YLR415CYLR415C 339 nt9.7□□□□□ -0.86
ATG4P53867 DDR2YOL052C-A 186 nt9.7□□□□□ -0.86
ATG4P53867 YFL067WYFL067W 528 nt9.69□□□□□ -0.86
ATG4P53867 GPI16YHR188C 1833 nt9.68□□□□□ -0.86
ATG4P53867 CRR1YLR213C 1269 nt9.66□□□□□ -0.86
ATG4P53867 VPS60YDR486C 690 nt9.65□□□□□ -0.86
ATG4P53867 SWC5YBR231C 912 nt9.65□□□□□ -0.86
ATG4P53867 NCP1YHR042W 2076 nt9.64□□□□□ -0.87
ATG4P53867 YDL086C-AYDL086C-A 435 nt9.64□□□□□ -0.87
ATG4P53867 NAT4YMR069W 858 nt9.64□□□□□ -0.87
ATG4P53867 ALG3YBL082C 1377 nt9.62□□□□□ -0.87
ATG4P53867 PIB2YGL023C 1908 nt9.61□□□□□ -0.87
ATG4P53867 ANP1YEL036C 1503 nt9.61□□□□□ -0.87
ATG4P53867 FEN2YCR028C 1539 nt9.6□□□□□ -0.87
ATG4P53867 GLK1YCL040W 1503 nt9.59□□□□□ -0.87
ATG4P53867 SNG1YGR197C 1644 nt9.58□□□□□ -0.88
ATG4P53867 LYS4YDR234W 2082 nt9.58□□□□□ -0.88
ATG4P53867 HEM12YDR047W 1089 nt9.56□□□□□ -0.88
ATG4P53867 MIR1YJR077C 936 nt9.56□□□□□ -0.88
ATG4P53867 VPS75YNL246W 795 nt9.56□□□□□ -0.88
ATG4P53867 RPM1RPM1 483 nt9.55□□□□□ -0.88
ATG4P53867 MIC10YCL057C-A 294 nt9.55□□□□□ -0.88
ATG4P53867 SPT8YLR055C 1809 nt9.54□□□□□ -0.88
ATG4P53867 NME1NME1 340 nt9.54□□□□□ -0.88
ATG4P53867 MSF1YPR047W 1410 nt9.54□□□□□ -0.88
ATG4P53867 THI74YDR438W 1113 nt9.53□□□□□ -0.88
ATG4P53867 BOP3YNL042W 1191 nt9.52□□□□□ -0.89
ATG4P53867 YIR016WYIR016W 798 nt9.5□□□□□ -0.89
ATG4P53867 RTF1YGL244W 1677 nt9.5□□□□□ -0.89
ATG4P53867 TIM17YJL143W 477 nt9.45□□□□□ -0.9
ATG4P53867 PAU7YAR020C 168 nt9.43□□□□□ -0.9
ATG4P53867 DAT1YML113W 747 nt9.42□□□□□ -0.9
ATG4P53867 SHM2YLR058C 1410 nt9.39□□□□□ -0.91
ATG4P53867 YHR056W-AYHR056W-A 435 nt9.39□□□□□ -0.91
ATG4P53867 XDJ1YLR090W 1380 nt9.37□□□□□ -0.91
ATG4P53867 BNA2YJR078W 1362 nt9.37□□□□□ -0.91
ATG4P53867 UBA4YHR111W 1323 nt9.36□□□□□ -0.91
ATG4P53867 PTK1YKL198C 1989 nt9.35□□□□□ -0.91
ATG4P53867 YGL034CYGL034C 366 nt9.35□□□□□ -0.91
ATG4P53867 SHB17YKR043C 816 nt9.35□□□□□ -0.91
ATG4P53867 MIC12YBR262C 321 nt9.35□□□□□ -0.91
ATG4P53867 YMR244WYMR244W 1068 nt9.34□□□□□ -0.91
ATG4P53867 SGT2YOR007C 1041 nt9.32□□□□□ -0.92
ATG4P53867 NIT1YIL164C 600 nt9.31□□□□□ -0.92
ATG4P53867 YSR3YKR053C 1215 nt9.31□□□□□ -0.92
ATG4P53867 RAX1YOR301W 1308 nt9.31□□□□□ -0.92
ATG4P53867 GLR1YPL091W 1452 nt9.29□□□□□ -0.92
ATG4P53867 GDH3YAL062W 1374 nt9.29□□□□□ -0.92
ATG4P53867 YDR010CYDR010C 333 nt9.29□□□□□ -0.92
ATG4P53867 YGR201CYGR201C 678 nt9.27□□□□□ -0.93
ATG4P53867 XYL2YLR070C 1071 nt9.25□□□□□ -0.93
ATG4P53867 HHO1YPL127C 777 nt9.25□□□□□ -0.93
ATG4P53867 NDI1YML120C 1542 nt9.24□□□□□ -0.93
ATG4P53867 RET2YFR051C 1641 nt9.23□□□□□ -0.93
ATG4P53867 RBG1YAL036C 1110 nt9.22□□□□□ -0.93
ATG4P53867 YFL054CYFL054C 1941 nt9.22□□□□□ -0.93
ATG4P53867 PHO89YBR296C 1725 nt9.21□□□□□ -0.94
ATG4P53867 YCR087WYCR087W 516 nt9.2□□□□□ -0.94
ATG4P53867 AVT6YER119C 1347 nt9.19□□□□□ -0.94
ATG4P53867 YGR139WYGR139W 339 nt9.17□□□□□ -0.94
ATG4P53867 AIM45YPR004C 1035 nt9.17□□□□□ -0.94
ATG4P53867 RBG2YGR173W 1107 nt9.16□□□□□ -0.94
ATG4P53867 BOR1YNL275W 1731 nt9.14□□□□□ -0.95
ATG4P53867 GOR1YNL274C 1053 nt9.13□□□□□ -0.95
ATG4P53867 AGP1YCL025C 1902 nt9.13□□□□□ -0.95
ATG4P53867 CCA1YER168C 1641 nt9.11□□□□□ -0.95
ATG4P53867 MRP20YDR405W 792 nt9.1□□□□□ -0.95
ATG4P53867 DUT1YBR252W 444 nt9.1□□□□□ -0.95
ATG4P53867 YCR102CYCR102C 1107 nt9.09□□□□□ -0.95
ATG4P53867 COQ2YNR041C 1119 nt9.09□□□□□ -0.95
ATG4P53867 SFA1YDL168W 1161 nt9.07□□□□□ -0.96
ATG4P53867 YMR226CYMR226C 804 nt9.04□□□□□ -0.96
ATG4P53867 SWE1YJL187C 2460 nt9.04□□□□□ -0.96
ATG4P53867 MCH5YOR306C 1566 nt9.03□□□□□ -0.96
ATG4P53867 YHL019W-AYHL019W-A 594 nt9.03□□□□□ -0.96
ATG4P53867 RPL4BYDR012W 1089 nt8.98□□□□□ -0.97
ATG4P53867 SHH4YLR164W 507 nt8.98□□□□□ -0.97
ATG4P53867 RPL4AYBR031W 1089 nt8.98□□□□□ -0.97
ATG4P53867 NBP35YGL091C 987 nt8.97□□□□□ -0.97
ATG4P53867 YLR111WYLR111W 333 nt8.96□□□□□ -0.98
ATG4P53867 TIR3YIL011W 810 nt8.95□□□□□ -0.98
ATG4P53867 DUS1YML080W 1272 nt8.95□□□□□ -0.98
ATG4P53867 RPS14BYJL191W 417 nt8.94□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms