Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 YLR415CYLR415C 339 nt15.45■□□□□ 0.06
VMR1P38735 AQY1YPR192W 918 nt15.44■□□□□ 0.06
VMR1P38735 ATF2YGR177C 1608 nt15.43■□□□□ 0.06
VMR1P38735 MSF1YPR047W 1410 nt15.43■□□□□ 0.06
VMR1P38735 YHL050CYHL050C 2094 nt15.42■□□□□ 0.06
VMR1P38735 YDR524C-BYDR524C-B 201 nt15.41■□□□□ 0.06
VMR1P38735 SWC5YBR231C 912 nt15.4■□□□□ 0.06
VMR1P38735 CCT4YDL143W 1587 nt15.35■□□□□ 0.05
VMR1P38735 STB1YNL309W 1263 nt15.35■□□□□ 0.05
VMR1P38735 ALG3YBL082C 1377 nt15.34■□□□□ 0.05
VMR1P38735 VPS60YDR486C 690 nt15.32■□□□□ 0.04
VMR1P38735 THI74YDR438W 1113 nt15.31■□□□□ 0.04
VMR1P38735 SPC25YER018C 666 nt15.31■□□□□ 0.04
VMR1P38735 YMR244WYMR244W 1068 nt15.31■□□□□ 0.04
VMR1P38735 GPI16YHR188C 1833 nt15.28■□□□□ 0.04
VMR1P38735 CRR1YLR213C 1269 nt15.28■□□□□ 0.04
VMR1P38735 VPS75YNL246W 795 nt15.27■□□□□ 0.03
VMR1P38735 DDR2YOL052C-A 186 nt15.24■□□□□ 0.03
VMR1P38735 ERF2YLR246W 1080 nt15.2■□□□□ 0.02
VMR1P38735 YFL067WYFL067W 528 nt15.19■□□□□ 0.02
VMR1P38735 MIC10YCL057C-A 294 nt15.18■□□□□ 0.02
VMR1P38735 SPT8YLR055C 1809 nt15.16■□□□□ 0.02
VMR1P38735 GLR1YPL091W 1452 nt15.15■□□□□ 0.02
VMR1P38735 DAT1YML113W 747 nt15.15■□□□□ 0.02
VMR1P38735 ANP1YEL036C 1503 nt15.12■□□□□ 0.01
VMR1P38735 YDL086C-AYDL086C-A 435 nt15.11■□□□□ 0.01
VMR1P38735 SNG1YGR197C 1644 nt15.07■□□□□ 0
VMR1P38735 SHB17YKR043C 816 nt15.07■□□□□ 0
VMR1P38735 PAU7YAR020C 168 nt15.06■□□□□ 0
VMR1P38735 FEN2YCR028C 1539 nt15.05■□□□□ 0
VMR1P38735 RBG2YGR173W 1107 nt15.05■□□□□ -0
VMR1P38735 UBA4YHR111W 1323 nt15.01□□□□□ -0.01
VMR1P38735 YGL034CYGL034C 366 nt15□□□□□ -0.01
VMR1P38735 TIM17YJL143W 477 nt15□□□□□ -0.01
VMR1P38735 NDI1YML120C 1542 nt14.98□□□□□ -0.01
VMR1P38735 SGT2YOR007C 1041 nt14.97□□□□□ -0.01
VMR1P38735 RBG1YAL036C 1110 nt14.94□□□□□ -0.02
VMR1P38735 HEM12YDR047W 1089 nt14.94□□□□□ -0.02
VMR1P38735 XYL2YLR070C 1071 nt14.93□□□□□ -0.02
VMR1P38735 YDR010CYDR010C 333 nt14.91□□□□□ -0.02
VMR1P38735 SHM2YLR058C 1410 nt14.91□□□□□ -0.02
VMR1P38735 BDF1YLR399C 2061 nt14.89□□□□□ -0.03
VMR1P38735 YIR016WYIR016W 798 nt14.89□□□□□ -0.03
VMR1P38735 SEC11YIR022W 504 nt14.89□□□□□ -0.03
VMR1P38735 LYS4YDR234W 2082 nt14.88□□□□□ -0.03
VMR1P38735 YSR3YKR053C 1215 nt14.87□□□□□ -0.03
VMR1P38735 XDJ1YLR090W 1380 nt14.86□□□□□ -0.03
VMR1P38735 NCP1YHR042W 2076 nt14.82□□□□□ -0.04
VMR1P38735 NIT1YIL164C 600 nt14.81□□□□□ -0.04
VMR1P38735 TAT1YBR069C 1860 nt14.8□□□□□ -0.04
VMR1P38735 PCH2YBR186W 1695 nt14.8□□□□□ -0.04
VMR1P38735 PHO89YBR296C 1725 nt14.76□□□□□ -0.05
VMR1P38735 RET2YFR051C 1641 nt14.74□□□□□ -0.05
VMR1P38735 AIM45YPR004C 1035 nt14.73□□□□□ -0.05
VMR1P38735 RAD51YER095W 1203 nt14.71□□□□□ -0.05
VMR1P38735 GUT2YIL155C 1950 nt14.66□□□□□ -0.06
VMR1P38735 SAM1YLR180W 1149 nt14.64□□□□□ -0.07
VMR1P38735 MIC12YBR262C 321 nt14.64□□□□□ -0.07
VMR1P38735 YHR056W-AYHR056W-A 435 nt14.63□□□□□ -0.07
VMR1P38735 BOP3YNL042W 1191 nt14.6□□□□□ -0.07
VMR1P38735 COQ2YNR041C 1119 nt14.6□□□□□ -0.07
VMR1P38735 BNA2YJR078W 1362 nt14.59□□□□□ -0.07
VMR1P38735 GDH3YAL062W 1374 nt14.59□□□□□ -0.07
VMR1P38735 RTF1YGL244W 1677 nt14.59□□□□□ -0.07
VMR1P38735 YCR087WYCR087W 516 nt14.58□□□□□ -0.08
VMR1P38735 PIB2YGL023C 1908 nt14.54□□□□□ -0.08
VMR1P38735 YGR201CYGR201C 678 nt14.54□□□□□ -0.08
VMR1P38735 RPM1RPM1 483 nt14.52□□□□□ -0.08
VMR1P38735 CAB5YDR196C 726 nt14.51□□□□□ -0.09
VMR1P38735 AVT6YER119C 1347 nt14.51□□□□□ -0.09
VMR1P38735 SDH5YOL071W 489 nt14.51□□□□□ -0.09
VMR1P38735 YMR226CYMR226C 804 nt14.5□□□□□ -0.09
VMR1P38735 SFA1YDL168W 1161 nt14.48□□□□□ -0.09
VMR1P38735 YHL019W-AYHL019W-A 594 nt14.47□□□□□ -0.09
VMR1P38735 YLR111WYLR111W 333 nt14.46□□□□□ -0.09
VMR1P38735 MRP20YDR405W 792 nt14.43□□□□□ -0.1
VMR1P38735 HHO1YPL127C 777 nt14.42□□□□□ -0.1
VMR1P38735 AGP1YCL025C 1902 nt14.41□□□□□ -0.1
VMR1P38735 DUT1YBR252W 444 nt14.39□□□□□ -0.11
VMR1P38735 YNR029CYNR029C 1290 nt14.38□□□□□ -0.11
VMR1P38735 SHH4YLR164W 507 nt14.34□□□□□ -0.11
VMR1P38735 RPS14BYJL191W 417 nt14.34□□□□□ -0.11
VMR1P38735 PTK1YKL198C 1989 nt14.31□□□□□ -0.12
VMR1P38735 RAX1YOR301W 1308 nt14.3□□□□□ -0.12
VMR1P38735 YLR349WYLR349W 507 nt14.3□□□□□ -0.12
VMR1P38735 ADH7YCR105W 1086 nt14.28□□□□□ -0.12
VMR1P38735 CCA1YER168C 1641 nt14.27□□□□□ -0.12
VMR1P38735 STE4YOR212W 1272 nt14.27□□□□□ -0.12
VMR1P38735 YFL054CYFL054C 1941 nt14.26□□□□□ -0.13
VMR1P38735 RPL4BYDR012W 1089 nt14.25□□□□□ -0.13
VMR1P38735 YLR279WYLR279W 390 nt14.25□□□□□ -0.13
VMR1P38735 RPL4AYBR031W 1089 nt14.25□□□□□ -0.13
VMR1P38735 YLR437C-AYLR437C-A 228 nt14.24□□□□□ -0.13
VMR1P38735 GOR1YNL274C 1053 nt14.22□□□□□ -0.13
VMR1P38735 YCR102CYCR102C 1107 nt14.17□□□□□ -0.14
VMR1P38735 PEX2YJL210W 816 nt14.17□□□□□ -0.14
VMR1P38735 YGR012WYGR012W 1182 nt14.17□□□□□ -0.14
VMR1P38735 PAU15YIR041W 375 nt14.17□□□□□ -0.14
VMR1P38735 TOM6YOR045W 186 nt14.14□□□□□ -0.15
VMR1P38735 RAD23YEL037C 1197 nt14.08□□□□□ -0.16
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms