Protein–RNA interactions for Protein: P20424

SRP54, Signal recognition particle subunit SRP54, yeastyeast

Known RBP Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRP54P20424 YFL015W-AYFL015W-A 318 nt12.46□□□□□ -0.41
SRP54P20424 YFR018CYFR018C 1092 nt12.43□□□□□ -0.42
SRP54P20424 AQY1YPR192W 918 nt12.43□□□□□ -0.42
SRP54P20424 PAU16YKL224C 372 nt12.42□□□□□ -0.42
SRP54P20424 STB1YNL309W 1263 nt12.41□□□□□ -0.42
SRP54P20424 ERF2YLR246W 1080 nt12.4□□□□□ -0.42
SRP54P20424 RTF1YGL244W 1677 nt12.39□□□□□ -0.43
SRP54P20424 YFL066CYFL066C 1179 nt12.39□□□□□ -0.43
SRP54P20424 CRR1YLR213C 1269 nt12.39□□□□□ -0.43
SRP54P20424 YDR524C-BYDR524C-B 201 nt12.38□□□□□ -0.43
SRP54P20424 BDH1YAL060W 1149 nt12.38□□□□□ -0.43
SRP54P20424 DDR2YOL052C-A 186 nt12.38□□□□□ -0.43
SRP54P20424 LYS4YDR234W 2082 nt12.37□□□□□ -0.43
SRP54P20424 SPC25YER018C 666 nt12.36□□□□□ -0.43
SRP54P20424 CCT4YDL143W 1587 nt12.35□□□□□ -0.43
SRP54P20424 YFL067WYFL067W 528 nt12.35□□□□□ -0.43
SRP54P20424 BOP3YNL042W 1191 nt12.35□□□□□ -0.43
SRP54P20424 MIC10YCL057C-A 294 nt12.34□□□□□ -0.43
SRP54P20424 YSP3YOR003W 1437 nt12.32□□□□□ -0.44
SRP54P20424 VPS60YDR486C 690 nt12.32□□□□□ -0.44
SRP54P20424 YDL086C-AYDL086C-A 435 nt12.31□□□□□ -0.44
SRP54P20424 SNG1YGR197C 1644 nt12.3□□□□□ -0.44
SRP54P20424 ALG3YBL082C 1377 nt12.3□□□□□ -0.44
SRP54P20424 RRT5YFR032C 870 nt12.29□□□□□ -0.44
SRP54P20424 PEX25YPL112C 1185 nt12.29□□□□□ -0.44
SRP54P20424 GPI16YHR188C 1833 nt12.29□□□□□ -0.44
SRP54P20424 MCH5YOR306C 1566 nt12.29□□□□□ -0.44
SRP54P20424 ANP1YEL036C 1503 nt12.27□□□□□ -0.44
SRP54P20424 YNL115CYNL115C 1935 nt12.27□□□□□ -0.44
SRP54P20424 HEM12YDR047W 1089 nt12.27□□□□□ -0.45
SRP54P20424 YLR415CYLR415C 339 nt12.27□□□□□ -0.45
SRP54P20424 FEN2YCR028C 1539 nt12.27□□□□□ -0.45
SRP54P20424 SWC5YBR231C 912 nt12.26□□□□□ -0.45
SRP54P20424 PTK1YKL198C 1989 nt12.23□□□□□ -0.45
SRP54P20424 YIR016WYIR016W 798 nt12.15□□□□□ -0.46
SRP54P20424 YHR056W-AYHR056W-A 435 nt12.09□□□□□ -0.47
SRP54P20424 SBA1YKL117W 651 nt12.09□□□□□ -0.47
SRP54P20424 SPT8YLR055C 1809 nt12.09□□□□□ -0.47
SRP54P20424 YFL054CYFL054C 1941 nt12.04□□□□□ -0.48
SRP54P20424 VPS75YNL246W 795 nt12.02□□□□□ -0.49
SRP54P20424 ALG12YNR030W 1656 nt12.01□□□□□ -0.49
SRP54P20424 MIR1YJR077C 936 nt12.01□□□□□ -0.49
SRP54P20424 NAT4YMR069W 858 nt12□□□□□ -0.49
SRP54P20424 BNA2YJR078W 1362 nt11.99□□□□□ -0.49
SRP54P20424 GLK1YCL040W 1503 nt11.99□□□□□ -0.49
SRP54P20424 SHM2YLR058C 1410 nt11.97□□□□□ -0.49
SRP54P20424 XDJ1YLR090W 1380 nt11.97□□□□□ -0.49
SRP54P20424 RAX1YOR301W 1308 nt11.97□□□□□ -0.49
SRP54P20424 MIC12YBR262C 321 nt11.97□□□□□ -0.49
SRP54P20424 TIM17YJL143W 477 nt11.95□□□□□ -0.5
SRP54P20424 THI74YDR438W 1113 nt11.94□□□□□ -0.5
SRP54P20424 MSF1YPR047W 1410 nt11.93□□□□□ -0.5
SRP54P20424 HSP60YLR259C 1719 nt11.91□□□□□ -0.5
SRP54P20424 GDH3YAL062W 1374 nt11.89□□□□□ -0.51
SRP54P20424 NIT1YIL164C 600 nt11.88□□□□□ -0.51
SRP54P20424 PAU7YAR020C 168 nt11.88□□□□□ -0.51
SRP54P20424 SGT2YOR007C 1041 nt11.87□□□□□ -0.51
SRP54P20424 HHO1YPL127C 777 nt11.87□□□□□ -0.51
SRP54P20424 DAT1YML113W 747 nt11.86□□□□□ -0.51
SRP54P20424 SHB17YKR043C 816 nt11.84□□□□□ -0.51
SRP54P20424 CCA1YER168C 1641 nt11.82□□□□□ -0.52
SRP54P20424 DUT1YBR252W 444 nt11.81□□□□□ -0.52
SRP54P20424 AGP1YCL025C 1902 nt11.81□□□□□ -0.52
SRP54P20424 UBA4YHR111W 1323 nt11.8□□□□□ -0.52
SRP54P20424 YGR201CYGR201C 678 nt11.79□□□□□ -0.52
SRP54P20424 SWE1YJL187C 2460 nt11.79□□□□□ -0.52
SRP54P20424 YDR010CYDR010C 333 nt11.78□□□□□ -0.52
SRP54P20424 Q0182Q0182 405 nt11.78□□□□□ -0.52
SRP54P20424 AVT6YER119C 1347 nt11.78□□□□□ -0.52
SRP54P20424 YGL034CYGL034C 366 nt11.74□□□□□ -0.53
SRP54P20424 YSR3YKR053C 1215 nt11.72□□□□□ -0.53
SRP54P20424 XYL2YLR070C 1071 nt11.71□□□□□ -0.53
SRP54P20424 NAR1YNL240C 1476 nt11.7□□□□□ -0.54
SRP54P20424 GOR1YNL274C 1053 nt11.68□□□□□ -0.54
SRP54P20424 PHO89YBR296C 1725 nt11.66□□□□□ -0.54
SRP54P20424 RET2YFR051C 1641 nt11.64□□□□□ -0.55
SRP54P20424 RBG1YAL036C 1110 nt11.61□□□□□ -0.55
SRP54P20424 YMR244WYMR244W 1068 nt11.6□□□□□ -0.55
SRP54P20424 NDI1YML120C 1542 nt11.58□□□□□ -0.56
SRP54P20424 DUS1YML080W 1272 nt11.57□□□□□ -0.56
SRP54P20424 YCR102CYCR102C 1107 nt11.56□□□□□ -0.56
SRP54P20424 SFA1YDL168W 1161 nt11.56□□□□□ -0.56
SRP54P20424 GLR1YPL091W 1452 nt11.54□□□□□ -0.56
SRP54P20424 COQ2YNR041C 1119 nt11.53□□□□□ -0.56
SRP54P20424 SHH4YLR164W 507 nt11.52□□□□□ -0.57
SRP54P20424 AIM45YPR004C 1035 nt11.51□□□□□ -0.57
SRP54P20424 RDN18-1RDN18-1 1800 nt11.51□□□□□ -0.57
SRP54P20424 RDN18-2RDN18-2 1800 nt11.51□□□□□ -0.57
SRP54P20424 YHL019W-AYHL019W-A 594 nt11.5□□□□□ -0.57
SRP54P20424 YCR087WYCR087W 516 nt11.49□□□□□ -0.57
SRP54P20424 NBP35YGL091C 987 nt11.49□□□□□ -0.57
SRP54P20424 STR3YGL184C 1398 nt11.49□□□□□ -0.57
SRP54P20424 AQY2YLL052C 450 nt11.48□□□□□ -0.57
SRP54P20424 MRP20YDR405W 792 nt11.46□□□□□ -0.57
SRP54P20424 CMP2YML057W 1815 nt11.45□□□□□ -0.58
SRP54P20424 YCL074WYCL074W 927 nt11.41□□□□□ -0.58
SRP54P20424 AAC1YMR056C 930 nt11.41□□□□□ -0.58
SRP54P20424 TOM6YOR045W 186 nt11.39□□□□□ -0.59
SRP54P20424 FUR4YBR021W 1902 nt11.39□□□□□ -0.59
SRP54P20424 TIR3YIL011W 810 nt11.38□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms