Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 MNP1YGL068W 585 nt9.16□□□□□ -0.94
TY1A-LR2P0CX72 RKM5YLR137W 1104 nt9.16□□□□□ -0.94
TY1A-LR2P0CX72 YNL067W-AYNL067W-A 147 nt9.16□□□□□ -0.94
TY1A-LR2P0CX72 BMT6YLR063W 1098 nt9.14□□□□□ -0.95
TY1A-LR2P0CX72 YAL037C-BYAL037C-B 975 nt9.13□□□□□ -0.95
TY1A-LR2P0CX72 YLR154C-GYLR154C-G 150 nt9.12□□□□□ -0.95
TY1A-LR2P0CX72 CRR1YLR213C 1269 nt9.12□□□□□ -0.95
TY1A-LR2P0CX72 YHM2YMR241W 945 nt9.12□□□□□ -0.95
TY1A-LR2P0CX72 HMT1YBR034C 1047 nt9.11□□□□□ -0.95
TY1A-LR2P0CX72 MIC10YCL057C-A 294 nt9.11□□□□□ -0.95
TY1A-LR2P0CX72 HEL2YDR266C 1920 nt9.1□□□□□ -0.95
TY1A-LR2P0CX72 FMP52YER004W 696 nt9.1□□□□□ -0.95
TY1A-LR2P0CX72 FMT1YBL013W 1206 nt9.09□□□□□ -0.95
TY1A-LR2P0CX72 RPM1RPM1 483 nt9.09□□□□□ -0.95
TY1A-LR2P0CX72 RAX1YOR301W 1308 nt9.08□□□□□ -0.96
TY1A-LR2P0CX72 IRC24YIR036C 792 nt9.07□□□□□ -0.96
TY1A-LR2P0CX72 ERF2YLR246W 1080 nt9.07□□□□□ -0.96
TY1A-LR2P0CX72 YDR510C-AYDR510C-A 117 nt9.06□□□□□ -0.96
TY1A-LR2P0CX72 WSC2YNL283C 1512 nt9.05□□□□□ -0.96
TY1A-LR2P0CX72 ADH2YMR303C 1047 nt9.05□□□□□ -0.96
TY1A-LR2P0CX72 YGR259CYGR259C 441 nt9.04□□□□□ -0.96
TY1A-LR2P0CX72 YTH1YPR107C 627 nt9.04□□□□□ -0.96
TY1A-LR2P0CX72 RSC4YKR008W 1878 nt9.02□□□□□ -0.96
TY1A-LR2P0CX72 NDI1YML120C 1542 nt9□□□□□ -0.97
TY1A-LR2P0CX72 HEM12YDR047W 1089 nt9□□□□□ -0.97
TY1A-LR2P0CX72 SNF6YHL025W 999 nt8.99□□□□□ -0.97
TY1A-LR2P0CX72 AGP1YCL025C 1902 nt8.99□□□□□ -0.97
TY1A-LR2P0CX72 ATF2YGR177C 1608 nt8.98□□□□□ -0.97
TY1A-LR2P0CX72 SNG1YGR197C 1644 nt8.98□□□□□ -0.97
TY1A-LR2P0CX72 SHU1YHL006C 453 nt8.98□□□□□ -0.97
TY1A-LR2P0CX72 FAF1YIL019W 1041 nt8.97□□□□□ -0.97
TY1A-LR2P0CX72 CWP1YKL096W 720 nt8.97□□□□□ -0.97
TY1A-LR2P0CX72 BNS1YGR230W 414 nt8.94□□□□□ -0.98
TY1A-LR2P0CX72 STB1YNL309W 1263 nt8.94□□□□□ -0.98
TY1A-LR2P0CX72 YPL071CYPL071C 471 nt8.94□□□□□ -0.98
TY1A-LR2P0CX72 YCL074WYCL074W 927 nt8.93□□□□□ -0.98
TY1A-LR2P0CX72 SPT20YOL148C 1815 nt8.92□□□□□ -0.98
TY1A-LR2P0CX72 REC114YMR133W 1287 nt8.92□□□□□ -0.98
TY1A-LR2P0CX72 UTP6YDR449C 1323 nt8.91□□□□□ -0.98
TY1A-LR2P0CX72 YLL053CYLL053C 459 nt8.91□□□□□ -0.98
TY1A-LR2P0CX72 PUS5YLR165C 765 nt8.91□□□□□ -0.98
TY1A-LR2P0CX72 NAS6YGR232W 687 nt8.9□□□□□ -0.98
TY1A-LR2P0CX72 YLR281CYLR281C 468 nt8.9□□□□□ -0.98
TY1A-LR2P0CX72 YIH1YCR059C 777 nt8.89□□□□□ -0.99
TY1A-LR2P0CX72 ARP10YDR106W 855 nt8.89□□□□□ -0.99
TY1A-LR2P0CX72 FHN1YGR131W 525 nt8.89□□□□□ -0.99
TY1A-LR2P0CX72 RPC82YPR190C 1965 nt8.88□□□□□ -0.99
TY1A-LR2P0CX72 RIM8YGL045W 1629 nt8.87□□□□□ -0.99
TY1A-LR2P0CX72 IMP2'YIL154C 1041 nt8.85□□□□□ -0.99
TY1A-LR2P0CX72 DUS1YML080W 1272 nt8.85□□□□□ -0.99
TY1A-LR2P0CX72 GBP2YCL011C 1284 nt8.85□□□□□ -0.99
TY1A-LR2P0CX72 RDN18-1RDN18-1 1800 nt8.84□□□□□ -0.99
TY1A-LR2P0CX72 RDN18-2RDN18-2 1800 nt8.84□□□□□ -0.99
TY1A-LR2P0CX72 TCD2YKL027W 1344 nt8.84□□□□□ -0.99
TY1A-LR2P0CX72 XDJ1YLR090W 1380 nt8.84□□□□□ -0.99
TY1A-LR2P0CX72 SEM1YDR363W-A 270 nt8.82□□□□□ -1
TY1A-LR2P0CX72 YFL067WYFL067W 528 nt8.82□□□□□ -1
TY1A-LR2P0CX72 ATG17YLR423C 1254 nt8.8□□□□□ -1
TY1A-LR2P0CX72 MIC12YBR262C 321 nt8.8□□□□□ -1
TY1A-LR2P0CX72 RNQ1YCL028W 1218 nt8.8□□□□□ -1
TY1A-LR2P0CX72 YGL114WYGL114W 2178 nt8.8□□□□□ -1
TY1A-LR2P0CX72 TRM5YHR070W 1500 nt8.77□□□□□ -1.01
TY1A-LR2P0CX72 FTR1YER145C 1215 nt8.77□□□□□ -1.01
TY1A-LR2P0CX72 MUP1YGR055W 1725 nt8.77□□□□□ -1.01
TY1A-LR2P0CX72 MAE1YKL029C 2010 nt8.76□□□□□ -1.01
TY1A-LR2P0CX72 STR3YGL184C 1398 nt8.75□□□□□ -1.01
TY1A-LR2P0CX72 SOR2YDL246C 1074 nt8.75□□□□□ -1.01
TY1A-LR2P0CX72 SOR1YJR159W 1074 nt8.75□□□□□ -1.01
TY1A-LR2P0CX72 SFP1YLR403W 2052 nt8.75□□□□□ -1.01
TY1A-LR2P0CX72 GAL1YBR020W 1587 nt8.74□□□□□ -1.01
TY1A-LR2P0CX72 YDL086C-AYDL086C-A 435 nt8.74□□□□□ -1.01
TY1A-LR2P0CX72 IDH1YNL037C 1083 nt8.74□□□□□ -1.01
TY1A-LR2P0CX72 ANP1YEL036C 1503 nt8.74□□□□□ -1.01
TY1A-LR2P0CX72 INA1YLR413W 2028 nt8.73□□□□□ -1.01
TY1A-LR2P0CX72 BNA2YJR078W 1362 nt8.73□□□□□ -1.01
TY1A-LR2P0CX72 GPI16YHR188C 1833 nt8.71□□□□□ -1.01
TY1A-LR2P0CX72 DDR2YOL052C-A 186 nt8.71□□□□□ -1.02
TY1A-LR2P0CX72 LPX1YOR084W 1164 nt8.71□□□□□ -1.02
TY1A-LR2P0CX72 DUT1YBR252W 444 nt8.7□□□□□ -1.02
TY1A-LR2P0CX72 SKG1YKR100C 1068 nt8.69□□□□□ -1.02
TY1A-LR2P0CX72 KDX1YKL161C 1302 nt8.68□□□□□ -1.02
TY1A-LR2P0CX72 HHO1YPL127C 777 nt8.67□□□□□ -1.02
TY1A-LR2P0CX72 GDH3YAL062W 1374 nt8.66□□□□□ -1.02
TY1A-LR2P0CX72 HOL1YNR055C 1761 nt8.66□□□□□ -1.02
TY1A-LR2P0CX72 MET2YNL277W 1461 nt8.65□□□□□ -1.02
TY1A-LR2P0CX72 MAS1YLR163C 1389 nt8.65□□□□□ -1.02
TY1A-LR2P0CX72 YJL107CYJL107C 1164 nt8.65□□□□□ -1.02
TY1A-LR2P0CX72 BSP1YPR171W 1731 nt8.65□□□□□ -1.03
TY1A-LR2P0CX72 AST1YBL069W 1290 nt8.64□□□□□ -1.03
TY1A-LR2P0CX72 MXR2YCL033C 507 nt8.64□□□□□ -1.03
TY1A-LR2P0CX72 WHI5YOR083W 888 nt8.63□□□□□ -1.03
TY1A-LR2P0CX72 RSM23YGL129C 1353 nt8.62□□□□□ -1.03
TY1A-LR2P0CX72 SWP1YMR149W 861 nt8.62□□□□□ -1.03
TY1A-LR2P0CX72 HMG2YLR450W 3138 nt8.62□□□□□ -1.03
TY1A-LR2P0CX72 ACO2YJL200C 2370 nt8.62□□□□□ -1.03
TY1A-LR2P0CX72 RMA1YKL132C 1293 nt8.61□□□□□ -1.03
TY1A-LR2P0CX72 HIF1YLL022C 1158 nt8.61□□□□□ -1.03
TY1A-LR2P0CX72 YCL042WYCL042W 360 nt8.61□□□□□ -1.03
TY1A-LR2P0CX72 NPP1YCR026C 2229 nt8.58□□□□□ -1.04
TY1A-LR2P0CX72 HOS2YGL194C 1359 nt8.58□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 43.6 ms