Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 RPT2YDL007W 1314 nt6.15□□□□□ -1.43
MSH3P25336 RAD57YDR004W 1383 nt6.15□□□□□ -1.43
MSH3P25336 UBP8YMR223W 1416 nt6.15□□□□□ -1.43
MSH3P25336 SIR1YKR101W 1965 nt6.15□□□□□ -1.43
MSH3P25336 EUG1YDR518W 1554 nt6.14□□□□□ -1.43
MSH3P25336 YMR155WYMR155W 1644 nt6.14□□□□□ -1.43
MSH3P25336 DFM1YDR411C 1026 nt6.14□□□□□ -1.43
MSH3P25336 RFA3YJL173C 369 nt6.14□□□□□ -1.43
MSH3P25336 SFC1YJR095W 969 nt6.14□□□□□ -1.43
MSH3P25336 RCN1YKL159C 636 nt6.14□□□□□ -1.43
MSH3P25336 TIS11YLR136C 858 nt6.14□□□□□ -1.43
MSH3P25336 CDC73YLR418C 1182 nt6.14□□□□□ -1.43
MSH3P25336 NBP1YLR457C 960 nt6.14□□□□□ -1.43
MSH3P25336 YNL108CYNL108C 813 nt6.14□□□□□ -1.43
MSH3P25336 EAF7YNL136W 1278 nt6.14□□□□□ -1.43
MSH3P25336 FDH1YOR388C 1131 nt6.14□□□□□ -1.43
MSH3P25336 BSD2YBR290W 966 nt6.14□□□□□ -1.43
MSH3P25336 VHS2YIL135C 1311 nt6.14□□□□□ -1.43
MSH3P25336 SEC12YNR026C 1416 nt6.14□□□□□ -1.43
MSH3P25336 SIA1YOR137C 1869 nt6.13□□□□□ -1.43
MSH3P25336 SOG2YOR353C 2376 nt6.13□□□□□ -1.43
MSH3P25336 ATP16YDL004W 483 nt6.13□□□□□ -1.43
MSH3P25336 SIT4YDL047W 936 nt6.13□□□□□ -1.43
MSH3P25336 YDL119CYDL119C 924 nt6.13□□□□□ -1.43
MSH3P25336 ERJ5YFR041C 888 nt6.13□□□□□ -1.43
MSH3P25336 SPO7YAL009W 780 nt6.13□□□□□ -1.43
MSH3P25336 PRS1YKL181W 1284 nt6.13□□□□□ -1.43
MSH3P25336 YKR070WYKR070W 1059 nt6.13□□□□□ -1.43
MSH3P25336 PML39YML107C 1005 nt6.13□□□□□ -1.43
MSH3P25336 YOL106WYOL106W 354 nt6.13□□□□□ -1.43
MSH3P25336 YCL001W-AYCL001W-A 462 nt6.13□□□□□ -1.43
MSH3P25336 HST1YOL068C 1512 nt6.13□□□□□ -1.43
MSH3P25336 RAV2YDR202C 1056 nt6.12□□□□□ -1.43
MSH3P25336 MHR1YDR296W 681 nt6.12□□□□□ -1.43
MSH3P25336 CAD1YDR423C 1230 nt6.12□□□□□ -1.43
MSH3P25336 CAB1YDR531W 1104 nt6.12□□□□□ -1.43
MSH3P25336 PRM2YIL037C 1971 nt6.12□□□□□ -1.43
MSH3P25336 YIL060WYIL060W 435 nt6.12□□□□□ -1.43
MSH3P25336 YJR071WYJR071W 369 nt6.12□□□□□ -1.43
MSH3P25336 YKR051WYKR051W 1257 nt6.12□□□□□ -1.43
MSH3P25336 YLL037WYLL037W 381 nt6.12□□□□□ -1.43
MSH3P25336 YMR084WYMR084W 789 nt6.12□□□□□ -1.43
MSH3P25336 YNL162W-AYNL162W-A 219 nt6.12□□□□□ -1.43
MSH3P25336 CUS2YNL286W 858 nt6.12□□□□□ -1.43
MSH3P25336 RPS15YOL040C 429 nt6.12□□□□□ -1.43
MSH3P25336 NTH2YBR001C 2343 nt6.12□□□□□ -1.43
MSH3P25336 DBP5YOR046C 1449 nt6.12□□□□□ -1.43
MSH3P25336 COX11YPL132W 903 nt6.12□□□□□ -1.43
MSH3P25336 YPR098CYPR098C 486 nt6.12□□□□□ -1.43
MSH3P25336 ACC1YNR016C 6702 nt6.12□□□□□ -1.43
MSH3P25336 BAP2YBR068C 1830 nt6.11□□□□□ -1.43
MSH3P25336 AVO1YOL078W 3531 nt6.11□□□□□ -1.43
MSH3P25336 DPH2YKL191W 1605 nt6.11□□□□□ -1.43
MSH3P25336 MTQ2YDR140W 666 nt6.11□□□□□ -1.43
MSH3P25336 YDR445CYDR445C 408 nt6.11□□□□□ -1.43
MSH3P25336 YGR176WYGR176W 348 nt6.11□□□□□ -1.43
MSH3P25336 SCEIQ0160 708 nt6.11□□□□□ -1.43
MSH3P25336 YJL068CYJL068C 900 nt6.11□□□□□ -1.43
MSH3P25336 GSP2YOR185C 663 nt6.11□□□□□ -1.43
MSH3P25336 SAS5YOR213C 747 nt6.11□□□□□ -1.43
MSH3P25336 ECM33YBR078W 1290 nt6.11□□□□□ -1.43
MSH3P25336 ADY3YDL239C 2373 nt6.1□□□□□ -1.43
MSH3P25336 YHR182WYHR182W 2358 nt6.1□□□□□ -1.43
MSH3P25336 ACF2YLR144C 2340 nt6.1□□□□□ -1.43
MSH3P25336 YDL162CYDL162C 357 nt6.1□□□□□ -1.43
MSH3P25336 NBP2YDR162C 711 nt6.1□□□□□ -1.43
MSH3P25336 ASP1YDR321W 1146 nt6.1□□□□□ -1.43
MSH3P25336 RPB7YDR404C 516 nt6.1□□□□□ -1.43
MSH3P25336 YFH7YFR007W 1062 nt6.1□□□□□ -1.43
MSH3P25336 YLR126CYLR126C 756 nt6.1□□□□□ -1.43
MSH3P25336 FYV6YNL133C 522 nt6.1□□□□□ -1.43
MSH3P25336 YOR152CYOR152C 771 nt6.1□□□□□ -1.43
MSH3P25336 MUM2YBR057C 1101 nt6.1□□□□□ -1.43
MSH3P25336 JID1YPR061C 906 nt6.1□□□□□ -1.43
MSH3P25336 CNS1YBR155W 1158 nt6.1□□□□□ -1.43
MSH3P25336 UBP9YER098W 2265 nt6.1□□□□□ -1.43
MSH3P25336 CNA1YLR433C 1662 nt6.1□□□□□ -1.43
MSH3P25336 NOB1YOR056C 1380 nt6.09□□□□□ -1.43
MSH3P25336 NRD1YNL251C 1728 nt6.09□□□□□ -1.43
MSH3P25336 DET1YDR051C 1005 nt6.09□□□□□ -1.43
MSH3P25336 YDR396WYDR396W 501 nt6.09□□□□□ -1.43
MSH3P25336 YFR032C-BYFR032C-B 264 nt6.09□□□□□ -1.43
MSH3P25336 DBP8YHR169W 1296 nt6.09□□□□□ -1.43
MSH3P25336 YKL123WYKL123W 381 nt6.09□□□□□ -1.43
MSH3P25336 CCS1YMR038C 750 nt6.09□□□□□ -1.43
MSH3P25336 YBL094CYBL094C 333 nt6.09□□□□□ -1.43
MSH3P25336 PNO1YOR145C 825 nt6.09□□□□□ -1.43
MSH3P25336 YPR177CYPR177C 372 nt6.09□□□□□ -1.43
MSH3P25336 PUF3YLL013C 2640 nt6.09□□□□□ -1.44
MSH3P25336 SMP1YBR182C 1359 nt6.08□□□□□ -1.44
MSH3P25336 MRPL7YDR237W 879 nt6.08□□□□□ -1.44
MSH3P25336 VMA7YGR020C 357 nt6.08□□□□□ -1.44
MSH3P25336 SPS19YNL202W 879 nt6.08□□□□□ -1.44
MSH3P25336 MDJ2YNL328C 441 nt6.08□□□□□ -1.44
MSH3P25336 TPT1YOL102C 693 nt6.08□□□□□ -1.44
MSH3P25336 UFE1YOR075W 1041 nt6.08□□□□□ -1.44
MSH3P25336 HUA2YOR284W 732 nt6.08□□□□□ -1.44
MSH3P25336 UIP4YPL186C 915 nt6.08□□□□□ -1.44
MSH3P25336 PDB1YBR221C 1101 nt6.08□□□□□ -1.44
MSH3P25336 TRK2YKR050W 2670 nt6.08□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 123.6 ms