Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RETREG2Q8NC44 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.78■■□□□ 1.72
RETREG2Q8NC44 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RETREG2Q8NC44 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.78■■□□□ 1.72
RETREG2Q8NC44 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.78■■□□□ 1.72
RETREG2Q8NC44 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RETREG2Q8NC44 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.78■■□□□ 1.72
RETREG2Q8NC44 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RETREG2Q8NC44 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
RETREG2Q8NC44 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RETREG2Q8NC44 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RETREG2Q8NC44 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.77■■□□□ 1.72
RETREG2Q8NC44 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
RETREG2Q8NC44 SRD5A1P1-201ENST00000442297 786 ntBASIC25.77■■□□□ 1.72
RETREG2Q8NC44 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RETREG2Q8NC44 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RETREG2Q8NC44 LINC00543-201ENST00000567234 1845 ntBASIC25.77■■□□□ 1.72
RETREG2Q8NC44 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
RETREG2Q8NC44 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RETREG2Q8NC44 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
RETREG2Q8NC44 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RETREG2Q8NC44 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
RETREG2Q8NC44 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.76■■□□□ 1.71
RETREG2Q8NC44 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.76■■□□□ 1.71
RETREG2Q8NC44 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RETREG2Q8NC44 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RETREG2Q8NC44 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RETREG2Q8NC44 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RETREG2Q8NC44 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RETREG2Q8NC44 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RETREG2Q8NC44 RARRES2P6-201ENST00000567333 442 ntBASIC25.75■■□□□ 1.71
RETREG2Q8NC44 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RETREG2Q8NC44 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
RETREG2Q8NC44 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RETREG2Q8NC44 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RETREG2Q8NC44 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RETREG2Q8NC44 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RETREG2Q8NC44 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.74■■□□□ 1.71
RETREG2Q8NC44 AC135279.3-201ENST00000610945 1311 ntBASIC25.74■■□□□ 1.71
RETREG2Q8NC44 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RETREG2Q8NC44 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.74■■□□□ 1.71
RETREG2Q8NC44 AC141586.4-201ENST00000624558 1573 ntBASIC25.73■■□□□ 1.71
RETREG2Q8NC44 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
RETREG2Q8NC44 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 MIR6089-201ENST00000616698 64 ntBASIC25.72■■□□□ 1.71
RETREG2Q8NC44 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RETREG2Q8NC44 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RETREG2Q8NC44 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.71■■□□□ 1.71
RETREG2Q8NC44 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RETREG2Q8NC44 SUDS3P1-201ENST00000505831 966 ntBASIC25.71■■□□□ 1.71
RETREG2Q8NC44 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.71■■□□□ 1.71
RETREG2Q8NC44 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.71■■□□□ 1.71
RETREG2Q8NC44 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
RETREG2Q8NC44 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.7■■□□□ 1.71
RETREG2Q8NC44 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RETREG2Q8NC44 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.7■■□□□ 1.7
RETREG2Q8NC44 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.7■■□□□ 1.7
RETREG2Q8NC44 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.7■■□□□ 1.7
RETREG2Q8NC44 AC092666.2-201ENST00000613287 246 ntBASIC25.7■■□□□ 1.7
RETREG2Q8NC44 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RETREG2Q8NC44 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RETREG2Q8NC44 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
RETREG2Q8NC44 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.7■■□□□ 1.7
RETREG2Q8NC44 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
RETREG2Q8NC44 EDA-201ENST00000338901 1233 ntBASIC25.69■■□□□ 1.7
RETREG2Q8NC44 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RETREG2Q8NC44 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.69■■□□□ 1.7
RETREG2Q8NC44 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.69■■□□□ 1.7
RETREG2Q8NC44 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RETREG2Q8NC44 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RETREG2Q8NC44 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 AL031432.3-201ENST00000607698 485 ntBASIC25.68■■□□□ 1.7
RETREG2Q8NC44 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 AL355001.2-201ENST00000620617 1191 ntBASIC25.68■■□□□ 1.7
RETREG2Q8NC44 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RETREG2Q8NC44 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms