Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-4A0A140T8Q4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-4A0A140T8Q4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-4A0A140T8Q4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-4A0A140T8Q4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-4A0A140T8Q4 Gm4430-201ENSMUST00000192413 1943 ntBASIC12.86□□□□□ -0.35
Igkv3-4A0A140T8Q4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-4A0A140T8Q4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv3-4A0A140T8Q4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-4A0A140T8Q4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-4A0A140T8Q4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-4A0A140T8Q4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-4A0A140T8Q4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-4A0A140T8Q4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-4A0A140T8Q4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-4A0A140T8Q4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv3-4A0A140T8Q4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Gm6311-201ENSMUST00000073790 878 ntBASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv3-4A0A140T8Q4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Igkv3-4A0A140T8Q4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv3-4A0A140T8Q4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Gm7199-201ENSMUST00000118327 1485 ntBASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv3-4A0A140T8Q4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv3-4A0A140T8Q4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Gm34220-201ENSMUST00000223001 2709 ntBASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-4A0A140T8Q4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Igkv3-4A0A140T8Q4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-4A0A140T8Q4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Igkv3-4A0A140T8Q4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Igkv3-4A0A140T8Q4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-4A0A140T8Q4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igkv3-4A0A140T8Q4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-4A0A140T8Q4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Igkv3-4A0A140T8Q4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms