Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.99■■■□□ 2.55
LTN1O94822 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
LTN1O94822 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
LTN1O94822 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
LTN1O94822 SLC6A10P-202ENST00000431994 2058 ntBASIC30.98■■■□□ 2.55
LTN1O94822 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.98■■■□□ 2.55
LTN1O94822 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
LTN1O94822 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.98■■■□□ 2.55
LTN1O94822 MIR4767-201ENST00000582827 78 ntBASIC30.98■■■□□ 2.55
LTN1O94822 AL355001.2-201ENST00000620617 1191 ntBASIC30.98■■■□□ 2.55
LTN1O94822 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
LTN1O94822 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC30.98■■■□□ 2.55
LTN1O94822 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LTN1O94822 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
LTN1O94822 SERBP1P1-201ENST00000396021 1160 ntBASIC30.97■■■□□ 2.55
LTN1O94822 AL136967.2-201ENST00000623968 743 ntBASIC30.97■■■□□ 2.55
LTN1O94822 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
LTN1O94822 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
LTN1O94822 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
LTN1O94822 DUSP8P4-201ENST00000399538 1761 ntBASIC30.97■■■□□ 2.55
LTN1O94822 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
LTN1O94822 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
LTN1O94822 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
LTN1O94822 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.96■■■□□ 2.55
LTN1O94822 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
LTN1O94822 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
LTN1O94822 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
LTN1O94822 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.96■■■□□ 2.55
LTN1O94822 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.96■■■□□ 2.55
LTN1O94822 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
LTN1O94822 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
LTN1O94822 AC011298.3-201ENST00000615796 283 ntBASIC30.95■■■□□ 2.55
LTN1O94822 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
LTN1O94822 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
LTN1O94822 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
LTN1O94822 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
LTN1O94822 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LTN1O94822 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.94■■■□□ 2.54
LTN1O94822 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.94■■■□□ 2.54
LTN1O94822 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC30.94■■■□□ 2.54
LTN1O94822 AC104564.3-201ENST00000582367 638 ntBASIC30.94■■■□□ 2.54
LTN1O94822 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
LTN1O94822 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
LTN1O94822 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
LTN1O94822 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
LTN1O94822 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
LTN1O94822 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.93■■■□□ 2.54
LTN1O94822 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
LTN1O94822 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
LTN1O94822 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC30.93■■■□□ 2.54
LTN1O94822 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
LTN1O94822 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
LTN1O94822 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
LTN1O94822 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.92■■■□□ 2.54
LTN1O94822 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
LTN1O94822 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
LTN1O94822 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.91■■■□□ 2.54
LTN1O94822 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.91■■■□□ 2.54
LTN1O94822 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
LTN1O94822 AC099791.2-201ENST00000605725 427 ntBASIC30.9■■■□□ 2.54
LTN1O94822 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
LTN1O94822 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.9■■■□□ 2.54
LTN1O94822 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.89■■■□□ 2.54
LTN1O94822 SYT6-210ENST00000641643 1587 ntBASIC30.89■■■□□ 2.54
LTN1O94822 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.89■■■□□ 2.54
LTN1O94822 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
LTN1O94822 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
LTN1O94822 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.89■■■□□ 2.53
LTN1O94822 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.88■■■□□ 2.53
LTN1O94822 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
LTN1O94822 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
LTN1O94822 AC027682.1-201ENST00000562846 899 ntBASIC30.88■■■□□ 2.53
LTN1O94822 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.88■■■□□ 2.53
LTN1O94822 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
LTN1O94822 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
LTN1O94822 AC006455.2-201ENST00000429931 906 ntBASIC30.87■■■□□ 2.53
LTN1O94822 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC30.87■■■□□ 2.53
LTN1O94822 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
LTN1O94822 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
LTN1O94822 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
LTN1O94822 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LTN1O94822 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
LTN1O94822 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.86■■■□□ 2.53
LTN1O94822 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
LTN1O94822 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
LTN1O94822 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
LTN1O94822 AC009102.2-201ENST00000606772 1639 ntBASIC30.86■■■□□ 2.53
LTN1O94822 AC091305.1-201ENST00000479476 895 ntBASIC30.85■■■□□ 2.53
LTN1O94822 CA15P2-201ENST00000611168 834 ntBASIC30.85■■■□□ 2.53
LTN1O94822 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
LTN1O94822 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
LTN1O94822 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.85■■■□□ 2.53
LTN1O94822 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.84■■■□□ 2.53
LTN1O94822 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.84■■■□□ 2.53
LTN1O94822 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
LTN1O94822 RASA4CP-201ENST00000424092 1398 ntBASIC30.84■■■□□ 2.53
LTN1O94822 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.84■■■□□ 2.53
LTN1O94822 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
LTN1O94822 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.84■■■□□ 2.53
LTN1O94822 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms