Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 MET12YPL023C 1974 nt7.03□□□□□ -1.28
TY1B-HO13535 HST4YDR191W 1113 nt7.03□□□□□ -1.28
TY1B-HO13535 MET31YPL038W 534 nt7.03□□□□□ -1.28
TY1B-HO13535 YCR023CYCR023C 1836 nt7.03□□□□□ -1.28
TY1B-HO13535 HXT14YNL318C 1623 nt7.03□□□□□ -1.28
TY1B-HO13535 DCD1YHR144C 939 nt7.03□□□□□ -1.28
TY1B-HO13535 YJL215CYJL215C 360 nt7.03□□□□□ -1.28
TY1B-HO13535 SYG1YIL047C 2709 nt7.02□□□□□ -1.28
TY1B-HO13535 MAS1YLR163C 1389 nt7.02□□□□□ -1.29
TY1B-HO13535 YCR061WYCR061W 1896 nt7.02□□□□□ -1.29
TY1B-HO13535 RXT3YDL076C 885 nt7.02□□□□□ -1.29
TY1B-HO13535 MTM1YGR257C 1101 nt7.02□□□□□ -1.29
TY1B-HO13535 YOR379CYOR379C 339 nt7.02□□□□□ -1.29
TY1B-HO13535 BRE2YLR015W 1518 nt7.01□□□□□ -1.29
TY1B-HO13535 NMD3YHR170W 1557 nt7.01□□□□□ -1.29
TY1B-HO13535 LOS1YKL205W 3303 nt7.01□□□□□ -1.29
TY1B-HO13535 tS(AGA)D3tS(AGA)D3 83 nt7.01□□□□□ -1.29
TY1B-HO13535 GMH1YKR030W 822 nt7□□□□□ -1.29
TY1B-HO13535 THS1YIL078W 2205 nt7□□□□□ -1.29
TY1B-HO13535 ARB1YER036C 1833 nt7□□□□□ -1.29
TY1B-HO13535 TRX2YGR209C 315 nt7□□□□□ -1.29
TY1B-HO13535 PDX3YBR035C 687 nt7□□□□□ -1.29
TY1B-HO13535 MAL13YGR288W 1422 nt6.99□□□□□ -1.29
TY1B-HO13535 ARH1YDR376W 1482 nt6.99□□□□□ -1.29
TY1B-HO13535 RIM101YHL027W 1878 nt6.99□□□□□ -1.29
TY1B-HO13535 PUT1YLR142W 1431 nt6.99□□□□□ -1.29
TY1B-HO13535 ASA1YPR085C 1332 nt6.98□□□□□ -1.29
TY1B-HO13535 FAT3YKL187C 2253 nt6.98□□□□□ -1.29
TY1B-HO13535 ARC1YGL105W 1131 nt6.97□□□□□ -1.29
TY1B-HO13535 KAR2YJL034W 2049 nt6.97□□□□□ -1.29
TY1B-HO13535 RCR2YDR003W 633 nt6.97□□□□□ -1.29
TY1B-HO13535 COA3YJL062W-A 258 nt6.97□□□□□ -1.29
TY1B-HO13535 HMS2YJR147W 1077 nt6.97□□□□□ -1.29
TY1B-HO13535 YOL019W-AYOL019W-A 153 nt6.97□□□□□ -1.29
TY1B-HO13535 MPH2YDL247W 1830 nt6.97□□□□□ -1.29
TY1B-HO13535 KGD1YIL125W 3045 nt6.96□□□□□ -1.29
TY1B-HO13535 GTO1YGR154C 1071 nt6.96□□□□□ -1.3
TY1B-HO13535 APM2YHL019C 1818 nt6.96□□□□□ -1.3
TY1B-HO13535 KCC4YCL024W 3114 nt6.96□□□□□ -1.3
TY1B-HO13535 IRC22YEL001C 678 nt6.95□□□□□ -1.3
TY1B-HO13535 TRS33YOR115C 807 nt6.95□□□□□ -1.3
TY1B-HO13535 CSC1YLR241W 2349 nt6.95□□□□□ -1.3
TY1B-HO13535 YMD8YML038C 1329 nt6.94□□□□□ -1.3
TY1B-HO13535 TRP3YKL211C 1455 nt6.94□□□□□ -1.3
TY1B-HO13535 GLC3YEL011W 2115 nt6.93□□□□□ -1.3
TY1B-HO13535 snR10snR10 245 nt6.92□□□□□ -1.3
TY1B-HO13535 TFG1YGR186W 2208 nt6.92□□□□□ -1.3
TY1B-HO13535 SFT2YBL102W 648 nt6.92□□□□□ -1.3
TY1B-HO13535 TOS2YGR221C 1869 nt6.92□□□□□ -1.3
TY1B-HO13535 PUS1YPL212C 1635 nt6.92□□□□□ -1.3
TY1B-HO13535 GCN20YFR009W 2259 nt6.91□□□□□ -1.3
TY1B-HO13535 MCM2YBL023C 2607 nt6.91□□□□□ -1.3
TY1B-HO13535 CPR4YCR069W 957 nt6.91□□□□□ -1.3
TY1B-HO13535 SUL2YLR092W 2682 nt6.91□□□□□ -1.3
TY1B-HO13535 RPS4BYHR203C 786 nt6.9□□□□□ -1.3
TY1B-HO13535 RPS4AYJR145C 786 nt6.9□□□□□ -1.3
TY1B-HO13535 NTA1YJR062C 1374 nt6.9□□□□□ -1.3
TY1B-HO13535 ALD6YPL061W 1503 nt6.9□□□□□ -1.3
TY1B-HO13535 AIM21YIR003W 2040 nt6.9□□□□□ -1.31
TY1B-HO13535 HPM1YIL110W 1134 nt6.9□□□□□ -1.31
TY1B-HO13535 MRS3YJL133W 945 nt6.9□□□□□ -1.31
TY1B-HO13535 UTP11YKL099C 753 nt6.9□□□□□ -1.31
TY1B-HO13535 SNF8YPL002C 702 nt6.9□□□□□ -1.31
TY1B-HO13535 SOL1YNR034W 966 nt6.89□□□□□ -1.31
TY1B-HO13535 UBX7YBR273C 1311 nt6.88□□□□□ -1.31
TY1B-HO13535 RPC53YDL150W 1269 nt6.88□□□□□ -1.31
TY1B-HO13535 CPR1YDR155C 489 nt6.87□□□□□ -1.31
TY1B-HO13535 SPG4YMR107W 348 nt6.87□□□□□ -1.31
TY1B-HO13535 YDL228CYDL228C 642 nt6.87□□□□□ -1.31
TY1B-HO13535 CPS1YJL172W 1731 nt6.86□□□□□ -1.31
TY1B-HO13535 AST1YBL069W 1290 nt6.86□□□□□ -1.31
TY1B-HO13535 YOR131CYOR131C 657 nt6.85□□□□□ -1.31
TY1B-HO13535 TRM11YOL124C 1302 nt6.85□□□□□ -1.31
TY1B-HO13535 SFB3YHR098C 2790 nt6.84□□□□□ -1.31
TY1B-HO13535 MSC2YDR205W 2175 nt6.83□□□□□ -1.32
TY1B-HO13535 CNN1YFR046C 1086 nt6.83□□□□□ -1.32
TY1B-HO13535 CTR3YLR411W 726 nt6.83□□□□□ -1.32
TY1B-HO13535 SGV1YPR161C 1974 nt6.83□□□□□ -1.32
TY1B-HO13535 ASN2YGR124W 1719 nt6.83□□□□□ -1.32
TY1B-HO13535 PCT1YGR202C 1275 nt6.82□□□□□ -1.32
TY1B-HO13535 YNR065CYNR065C 3351 nt6.82□□□□□ -1.32
TY1B-HO13535 YPL162CYPL162C 822 nt6.82□□□□□ -1.32
TY1B-HO13535 PHO87YCR037C 2772 nt6.81□□□□□ -1.32
TY1B-HO13535 CWH43YCR017C 2862 nt6.81□□□□□ -1.32
TY1B-HO13535 RSC2YLR357W 2670 nt6.81□□□□□ -1.32
TY1B-HO13535 ADY3YDL239C 2373 nt6.81□□□□□ -1.32
TY1B-HO13535 AKL1YBR059C 3327 nt6.81□□□□□ -1.32
TY1B-HO13535 SSB2YNL209W 1842 nt6.8□□□□□ -1.32
TY1B-HO13535 FKH2YNL068C 2589 nt6.8□□□□□ -1.32
TY1B-HO13535 IMD3YLR432W 1572 nt6.8□□□□□ -1.32
TY1B-HO13535 BUD25YER014C-A 462 nt6.8□□□□□ -1.32
TY1B-HO13535 OXP1YKL215C 3861 nt6.8□□□□□ -1.32
TY1B-HO13535 BIT2YBR270C 1638 nt6.8□□□□□ -1.32
TY1B-HO13535 MHF2YDL160C-A 243 nt6.8□□□□□ -1.32
TY1B-HO13535 GCV1YDR019C 1203 nt6.8□□□□□ -1.32
TY1B-HO13535 YDR161WYDR161W 1164 nt6.8□□□□□ -1.32
TY1B-HO13535 RPL43BYJR094W-A 279 nt6.8□□□□□ -1.32
TY1B-HO13535 POR1YNL055C 852 nt6.8□□□□□ -1.32
TY1B-HO13535 YIL165CYIL165C 360 nt6.79□□□□□ -1.32
TY1B-HO13535 YKL223WYKL223W 333 nt6.79□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms