Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 PHO90YJL198W 2646 nt5.55□□□□□ -1.52
BRF1P29056 MSC7YHR039C 1935 nt5.55□□□□□ -1.52
BRF1P29056 GIR2YDR152W 798 nt5.55□□□□□ -1.52
BRF1P29056 HST4YDR191W 1113 nt5.55□□□□□ -1.52
BRF1P29056 EAF5YEL018W 840 nt5.55□□□□□ -1.52
BRF1P29056 tX(XXX)DtX(XXX)D 100 nt5.55□□□□□ -1.52
BRF1P29056 MLC2YPR188C 492 nt5.55□□□□□ -1.52
BRF1P29056 SMF2YHR050W 1650 nt5.55□□□□□ -1.52
BRF1P29056 ADE3YGR204W 2841 nt5.55□□□□□ -1.52
BRF1P29056 YEL077CYEL077C 3834 nt5.54□□□□□ -1.52
BRF1P29056 HMLALPHA1YCL066W 528 nt5.54□□□□□ -1.52
BRF1P29056 MATALPHA1YCR040W 528 nt5.54□□□□□ -1.52
BRF1P29056 MED4YOR174W 855 nt5.54□□□□□ -1.52
BRF1P29056 GIP2YER054C 1647 nt5.54□□□□□ -1.52
BRF1P29056 CNL1YDR357C 369 nt5.53□□□□□ -1.52
BRF1P29056 HCR1YLR192C 798 nt5.53□□□□□ -1.52
BRF1P29056 TAF11YML015C 1041 nt5.53□□□□□ -1.52
BRF1P29056 HOR7YMR251W-A 180 nt5.53□□□□□ -1.52
BRF1P29056 GFD1YMR255W 567 nt5.53□□□□□ -1.52
BRF1P29056 GRE1YPL223C 507 nt5.53□□□□□ -1.52
BRF1P29056 YBR230W-AYBR230W-A 201 nt5.53□□□□□ -1.52
BRF1P29056 CBP1YJL209W 1965 nt5.53□□□□□ -1.52
BRF1P29056 PRP43YGL120C 2304 nt5.52□□□□□ -1.53
BRF1P29056 YCR097W-AYCR097W-A 267 nt5.52□□□□□ -1.53
BRF1P29056 HSX1tR(CCU)J 72 nt5.52□□□□□ -1.53
BRF1P29056 DAL82YNL314W 768 nt5.52□□□□□ -1.53
BRF1P29056 PSH1YOL054W 1221 nt5.52□□□□□ -1.53
BRF1P29056 BUB3YOR026W 1026 nt5.52□□□□□ -1.53
BRF1P29056 ELC1YPL046C 300 nt5.52□□□□□ -1.53
BRF1P29056 GYP1YOR070C 1914 nt5.52□□□□□ -1.53
BRF1P29056 SDA1YGR245C 2304 nt5.52□□□□□ -1.53
BRF1P29056 BSC5YNR069C 1470 nt5.51□□□□□ -1.53
BRF1P29056 HEM3YDL205C 984 nt5.51□□□□□ -1.53
BRF1P29056 SCS2YER120W 735 nt5.51□□□□□ -1.53
BRF1P29056 YIL028WYIL028W 399 nt5.51□□□□□ -1.53
BRF1P29056 YIL060WYIL060W 435 nt5.51□□□□□ -1.53
BRF1P29056 MAC1YMR021C 1254 nt5.51□□□□□ -1.53
BRF1P29056 HLJ1YMR161W 675 nt5.51□□□□□ -1.53
BRF1P29056 PIN2YOR104W 849 nt5.51□□□□□ -1.53
BRF1P29056 RMI1YPL024W 726 nt5.51□□□□□ -1.53
BRF1P29056 ALG2YGL065C 1512 nt5.51□□□□□ -1.53
BRF1P29056 TFG1YGR186W 2208 nt5.51□□□□□ -1.53
BRF1P29056 NGR1YBR212W 2019 nt5.5□□□□□ -1.53
BRF1P29056 COX26YDR119W-A 201 nt5.5□□□□□ -1.53
BRF1P29056 SFC1YJR095W 969 nt5.5□□□□□ -1.53
BRF1P29056 PGU1YJR153W 1086 nt5.5□□□□□ -1.53
BRF1P29056 YKR104WYKR104W 921 nt5.5□□□□□ -1.53
BRF1P29056 ERG3YLR056W 1098 nt5.5□□□□□ -1.53
BRF1P29056 YLR194CYLR194C 765 nt5.5□□□□□ -1.53
BRF1P29056 ROT1YMR200W 771 nt5.5□□□□□ -1.53
BRF1P29056 TOM40YMR203W 1164 nt5.5□□□□□ -1.53
BRF1P29056 RBD2YPL246C 789 nt5.5□□□□□ -1.53
BRF1P29056 BAP2YBR068C 1830 nt5.5□□□□□ -1.53
BRF1P29056 GAL4YPL248C 2646 nt5.49□□□□□ -1.53
BRF1P29056 FAA3YIL009W 2085 nt5.49□□□□□ -1.53
BRF1P29056 MRE11YMR224C 2079 nt5.49□□□□□ -1.53
BRF1P29056 ZUO1YGR285C 1302 nt5.48□□□□□ -1.53
BRF1P29056 YBR139WYBR139W 1527 nt5.48□□□□□ -1.53
BRF1P29056 DAL81YIR023W 2913 nt5.48□□□□□ -1.53
BRF1P29056 BUL1YMR275C 2931 nt5.48□□□□□ -1.53
BRF1P29056 GPR1YDL035C 2886 nt5.48□□□□□ -1.53
BRF1P29056 TEA1YOR337W 2280 nt5.48□□□□□ -1.53
BRF1P29056 FRE1YLR214W 2061 nt5.48□□□□□ -1.53
BRF1P29056 MKS1YNL076W 1755 nt5.48□□□□□ -1.53
BRF1P29056 SLD2YKL108W 1362 nt5.48□□□□□ -1.53
BRF1P29056 RTT106YNL206C 1368 nt5.48□□□□□ -1.53
BRF1P29056 RTT103YDR289C 1230 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)CtN(GUU)C 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)FtN(GUU)F 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)GtN(GUU)G 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)KtN(GUU)K 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)LtN(GUU)L 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)N1tN(GUU)N1 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)N2tN(GUU)N2 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)O1tN(GUU)O1 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)O2tN(GUU)O2 74 nt5.48□□□□□ -1.53
BRF1P29056 tN(GUU)PtN(GUU)P 74 nt5.48□□□□□ -1.53
BRF1P29056 MRPL13YKR006C 795 nt5.48□□□□□ -1.53
BRF1P29056 TFS1YLR178C 660 nt5.48□□□□□ -1.53
BRF1P29056 MRPL15YLR312W-A 762 nt5.48□□□□□ -1.53
BRF1P29056 YBR126W-AYBR126W-A 207 nt5.48□□□□□ -1.53
BRF1P29056 PRM7YDL039C 2097 nt5.47□□□□□ -1.53
BRF1P29056 HIR2YOR038C 2628 nt5.47□□□□□ -1.53
BRF1P29056 PMT5YDL093W 2232 nt5.47□□□□□ -1.53
BRF1P29056 STP4YDL048C 1473 nt5.47□□□□□ -1.53
BRF1P29056 YDL034WYDL034W 345 nt5.47□□□□□ -1.53
BRF1P29056 KNH1YDL049C 807 nt5.47□□□□□ -1.53
BRF1P29056 CAD1YDR423C 1230 nt5.47□□□□□ -1.53
BRF1P29056 PGA3YML125C 939 nt5.47□□□□□ -1.53
BRF1P29056 SSO1YPL232W 873 nt5.47□□□□□ -1.53
BRF1P29056 YPR098CYPR098C 486 nt5.47□□□□□ -1.53
BRF1P29056 YCL041CYCL041C 495 nt5.47□□□□□ -1.53
BRF1P29056 HAP1YLR256W 4509 nt5.46□□□□□ -1.54
BRF1P29056 ZRT1YGL255W 1131 nt5.46□□□□□ -1.54
BRF1P29056 PRM10YJL108C 1152 nt5.46□□□□□ -1.54
BRF1P29056 YJR115WYJR115W 510 nt5.46□□□□□ -1.54
BRF1P29056 YLL059CYLL059C 507 nt5.46□□□□□ -1.54
BRF1P29056 GTR1YML121W 933 nt5.46□□□□□ -1.54
BRF1P29056 LEU1YGL009C 2340 nt5.46□□□□□ -1.54
BRF1P29056 SHE10YGL228W 1734 nt5.45□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms