Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
PCDH18Q9HCL0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH18Q9HCL0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH18Q9HCL0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDH18Q9HCL0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH18Q9HCL0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH18Q9HCL0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH18Q9HCL0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH18Q9HCL0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.08■■□□□ 1.44
PCDH18Q9HCL0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH18Q9HCL0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 AC011551.1-201ENST00000614101 683 ntBASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 AC004812.2-201ENST00000611079 2094 ntBASIC24.06■■□□□ 1.44
PCDH18Q9HCL0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDH18Q9HCL0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH18Q9HCL0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.05■■□□□ 1.44
PCDH18Q9HCL0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDH18Q9HCL0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.05■■□□□ 1.44
PCDH18Q9HCL0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH18Q9HCL0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH18Q9HCL0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH18Q9HCL0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH18Q9HCL0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH18Q9HCL0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH18Q9HCL0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PCDH18Q9HCL0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDH18Q9HCL0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH18Q9HCL0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH18Q9HCL0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDH18Q9HCL0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH18Q9HCL0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH18Q9HCL0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDH18Q9HCL0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDH18Q9HCL0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH18Q9HCL0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDH18Q9HCL0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH18Q9HCL0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH18Q9HCL0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH18Q9HCL0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDH18Q9HCL0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH18Q9HCL0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH18Q9HCL0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH18Q9HCL0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
PCDH18Q9HCL0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24■■□□□ 1.43
PCDH18Q9HCL0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24■■□□□ 1.43
PCDH18Q9HCL0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
PCDH18Q9HCL0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH18Q9HCL0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH18Q9HCL0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24■■□□□ 1.43
PCDH18Q9HCL0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24■■□□□ 1.43
PCDH18Q9HCL0 AC120024.1-201ENST00000562672 995 ntBASIC24■■□□□ 1.43
PCDH18Q9HCL0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
PCDH18Q9HCL0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24■■□□□ 1.43
PCDH18Q9HCL0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24■■□□□ 1.43
PCDH18Q9HCL0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH18Q9HCL0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH18Q9HCL0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH18Q9HCL0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH18Q9HCL0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH18Q9HCL0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDH18Q9HCL0 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDH18Q9HCL0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
PCDH18Q9HCL0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PCDH18Q9HCL0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH18Q9HCL0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PCDH18Q9HCL0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH18Q9HCL0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.98■■□□□ 1.43
PCDH18Q9HCL0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.98■■□□□ 1.43
PCDH18Q9HCL0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms