Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 ISN1YOR155C 1353 nt6.97□□□□□ -1.29
MSH4P40965 GIT1YCR098C 1557 nt6.97□□□□□ -1.29
MSH4P40965 GET3YDL100C 1065 nt6.97□□□□□ -1.29
MSH4P40965 YBL029C-AYBL029C-A 285 nt6.97□□□□□ -1.29
MSH4P40965 DOM34YNL001W 1161 nt6.97□□□□□ -1.29
MSH4P40965 YDR514CYDR514C 1452 nt6.97□□□□□ -1.29
MSH4P40965 LPL1YOR059C 1353 nt6.96□□□□□ -1.29
MSH4P40965 COX9YDL067C 180 nt6.96□□□□□ -1.3
MSH4P40965 YGL072CYGL072C 360 nt6.96□□□□□ -1.3
MSH4P40965 YML012C-AYML012C-A 378 nt6.96□□□□□ -1.3
MSH4P40965 CTL1YMR180C 963 nt6.96□□□□□ -1.3
MSH4P40965 SSU72YNL222W 621 nt6.96□□□□□ -1.3
MSH4P40965 YNL226WYNL226W 411 nt6.96□□□□□ -1.3
MSH4P40965 BSC4YNL269W 396 nt6.96□□□□□ -1.3
MSH4P40965 MRPS12YNR036C 462 nt6.96□□□□□ -1.3
MSH4P40965 MCT1YOR221C 1083 nt6.96□□□□□ -1.3
MSH4P40965 YML133CYML133C 4125 nt6.96□□□□□ -1.3
MSH4P40965 FET3YMR058W 1911 nt6.95□□□□□ -1.3
MSH4P40965 PRI2YKL045W 1587 nt6.95□□□□□ -1.3
MSH4P40965 YDR278CYDR278C 318 nt6.95□□□□□ -1.3
MSH4P40965 YEA4YEL004W 1029 nt6.95□□□□□ -1.3
MSH4P40965 YHR070C-AYHR070C-A 411 nt6.95□□□□□ -1.3
MSH4P40965 HAP3YBL021C 435 nt6.95□□□□□ -1.3
MSH4P40965 YOL050CYOL050C 321 nt6.95□□□□□ -1.3
MSH4P40965 IRC14YOR135C 342 nt6.95□□□□□ -1.3
MSH4P40965 YBR124WYBR124W 360 nt6.95□□□□□ -1.3
MSH4P40965 MRPS5YBR251W 924 nt6.95□□□□□ -1.3
MSH4P40965 STE13YOR219C 2796 nt6.94□□□□□ -1.3
MSH4P40965 GPB2YAL056W 2643 nt6.94□□□□□ -1.3
MSH4P40965 MDM31YHR194W 1740 nt6.94□□□□□ -1.3
MSH4P40965 RPC53YDL150W 1269 nt6.94□□□□□ -1.3
MSH4P40965 YIR042CYIR042C 711 nt6.94□□□□□ -1.3
MSH4P40965 TSA1YML028W 591 nt6.94□□□□□ -1.3
MSH4P40965 YMR155WYMR155W 1644 nt6.94□□□□□ -1.3
MSH4P40965 WHI2YOR043W 1461 nt6.93□□□□□ -1.3
MSH4P40965 CDC19YAL038W 1503 nt6.93□□□□□ -1.3
MSH4P40965 PHM8YER037W 966 nt6.93□□□□□ -1.3
MSH4P40965 YGR168CYGR168C 1131 nt6.93□□□□□ -1.3
MSH4P40965 PML1YLR016C 615 nt6.93□□□□□ -1.3
MSH4P40965 RPL10YLR075W 666 nt6.93□□□□□ -1.3
MSH4P40965 MFA2YNL145W 117 nt6.93□□□□□ -1.3
MSH4P40965 STB5YHR178W 2232 nt6.93□□□□□ -1.3
MSH4P40965 PYK2YOR347C 1521 nt6.92□□□□□ -1.3
MSH4P40965 YDR222WYDR222W 1248 nt6.92□□□□□ -1.3
MSH4P40965 KRE28YDR532C 1158 nt6.92□□□□□ -1.3
MSH4P40965 YEL068CYEL068C 333 nt6.92□□□□□ -1.3
MSH4P40965 AAD6YFL056C 639 nt6.92□□□□□ -1.3
MSH4P40965 SOH1YGL127C 384 nt6.92□□□□□ -1.3
MSH4P40965 ELA1YNL230C 1140 nt6.92□□□□□ -1.3
MSH4P40965 CSG2YBR036C 1233 nt6.92□□□□□ -1.3
MSH4P40965 YBR292CYBR292C 372 nt6.92□□□□□ -1.3
MSH4P40965 DDC1YPL194W 1839 nt6.92□□□□□ -1.3
MSH4P40965 VMS1YDR049W 1899 nt6.92□□□□□ -1.3
MSH4P40965 SRV2YNL138W 1581 nt6.91□□□□□ -1.3
MSH4P40965 MKC7YDR144C 1791 nt6.91□□□□□ -1.3
MSH4P40965 IMG2YCR071C 441 nt6.91□□□□□ -1.3
MSH4P40965 UBC5YDR059C 447 nt6.91□□□□□ -1.3
MSH4P40965 COX20YDR231C 618 nt6.91□□□□□ -1.3
MSH4P40965 ARI1YGL157W 1044 nt6.91□□□□□ -1.3
MSH4P40965 LEU5YHR002W 1074 nt6.91□□□□□ -1.3
MSH4P40965 DAL2YIR029W 1032 nt6.91□□□□□ -1.3
MSH4P40965 CTK2YJL006C 972 nt6.91□□□□□ -1.3
MSH4P40965 RPF2YKR081C 1035 nt6.91□□□□□ -1.3
MSH4P40965 PCD1YLR151C 1023 nt6.91□□□□□ -1.3
MSH4P40965 YAP7YOL028C 738 nt6.91□□□□□ -1.3
MSH4P40965 SUB2YDL084W 1341 nt6.91□□□□□ -1.3
MSH4P40965 XBP1YIL101C 1944 nt6.91□□□□□ -1.3
MSH4P40965 COR1YBL045C 1374 nt6.91□□□□□ -1.3
MSH4P40965 MDM10YAL010C 1482 nt6.91□□□□□ -1.3
MSH4P40965 EMW1YNL313C 2715 nt6.9□□□□□ -1.3
MSH4P40965 ICT1YLR099C 1185 nt6.9□□□□□ -1.3
MSH4P40965 HCR1YLR192C 798 nt6.9□□□□□ -1.3
MSH4P40965 YML083CYML083C 1257 nt6.9□□□□□ -1.3
MSH4P40965 YMR119W-AYMR119W-A 375 nt6.9□□□□□ -1.3
MSH4P40965 YDC1YPL087W 954 nt6.9□□□□□ -1.3
MSH4P40965 MRP51YPL118W 1035 nt6.9□□□□□ -1.3
MSH4P40965 ATG29YPL166W 642 nt6.9□□□□□ -1.3
MSH4P40965 YGL101WYGL101W 648 nt6.89□□□□□ -1.31
MSH4P40965 EFM3YJR129C 1020 nt6.89□□□□□ -1.31
MSH4P40965 RHO4YKR055W 876 nt6.89□□□□□ -1.31
MSH4P40965 YOL035CYOL035C 303 nt6.89□□□□□ -1.31
MSH4P40965 HRT1YOL133W 366 nt6.89□□□□□ -1.31
MSH4P40965 AAD15YOL165C 432 nt6.89□□□□□ -1.31
MSH4P40965 IDI1YPL117C 867 nt6.89□□□□□ -1.31
MSH4P40965 DAP1YPL170W 459 nt6.89□□□□□ -1.31
MSH4P40965 PRP24YMR268C 1335 nt6.89□□□□□ -1.31
MSH4P40965 GUD1YDL238C 1470 nt6.89□□□□□ -1.31
MSH4P40965 MRK1YDL079C 1506 nt6.88□□□□□ -1.31
MSH4P40965 YCR016WYCR016W 873 nt6.88□□□□□ -1.31
MSH4P40965 YDL022C-AYDL022C-A 249 nt6.88□□□□□ -1.31
MSH4P40965 MRPL1YDR116C 858 nt6.88□□□□□ -1.31
MSH4P40965 DUO1YGL061C 744 nt6.88□□□□□ -1.31
MSH4P40965 SAY1YGR263C 1275 nt6.88□□□□□ -1.31
MSH4P40965 WSS1YHR134W 810 nt6.88□□□□□ -1.31
MSH4P40965 VPS20YMR077C 666 nt6.88□□□□□ -1.31
MSH4P40965 GPI2YPL076W 843 nt6.88□□□□□ -1.31
MSH4P40965 YPR114WYPR114W 948 nt6.88□□□□□ -1.31
MSH4P40965 YOL036WYOL036W 2286 nt6.88□□□□□ -1.31
MSH4P40965 URA7YBL039C 1740 nt6.87□□□□□ -1.31
MSH4P40965 YHL017WYHL017W 1599 nt6.87□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 11.1 ms