Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 IRC15YPL017C 1500 nt11.25□□□□□ -0.61
YLR040CQ07988 SCC4YER147C 1875 nt11.25□□□□□ -0.61
YLR040CQ07988 ART5YGR068C 1761 nt11.22□□□□□ -0.61
YLR040CQ07988 GFD2YCL036W 1701 nt11.21□□□□□ -0.62
YLR040CQ07988 MNP1YGL068W 585 nt11.2□□□□□ -0.62
YLR040CQ07988 GIS3YLR094C 1509 nt11.19□□□□□ -0.62
YLR040CQ07988 RKM5YLR137W 1104 nt11.15□□□□□ -0.62
YLR040CQ07988 PET9YBL030C 957 nt11.15□□□□□ -0.62
YLR040CQ07988 RTS2YOR077W 699 nt11.12□□□□□ -0.63
YLR040CQ07988 YCH1YGR203W 447 nt11.11□□□□□ -0.63
YLR040CQ07988 Q0182Q0182 405 nt11.11□□□□□ -0.63
YLR040CQ07988 SEC11YIR022W 504 nt11.11□□□□□ -0.63
YLR040CQ07988 NPL3YDR432W 1245 nt11.09□□□□□ -0.63
YLR040CQ07988 PCH2YBR186W 1695 nt11.08□□□□□ -0.64
YLR040CQ07988 YOR139CYOR139C 393 nt11.08□□□□□ -0.64
YLR040CQ07988 TIR4YOR009W 1464 nt11.06□□□□□ -0.64
YLR040CQ07988 CUE1YMR264W 612 nt11.03□□□□□ -0.64
YLR040CQ07988 GUT2YIL155C 1950 nt11.02□□□□□ -0.65
YLR040CQ07988 YSC84YHR016C 1407 nt11.01□□□□□ -0.65
YLR040CQ07988 YMR057CYMR057C 372 nt10.99□□□□□ -0.65
YLR040CQ07988 YHL050CYHL050C 2094 nt10.93□□□□□ -0.66
YLR040CQ07988 YIL100WYIL100W 354 nt10.92□□□□□ -0.66
YLR040CQ07988 YNL195CYNL195C 786 nt10.91□□□□□ -0.66
YLR040CQ07988 YOL037CYOL037C 354 nt10.91□□□□□ -0.66
YLR040CQ07988 YJL152WYJL152W 360 nt10.9□□□□□ -0.66
YLR040CQ07988 FPS1YLL043W 2010 nt10.89□□□□□ -0.67
YLR040CQ07988 RRT12YCR045C 1476 nt10.89□□□□□ -0.67
YLR040CQ07988 MOT3YMR070W 1473 nt10.89□□□□□ -0.67
YLR040CQ07988 YLR154C-GYLR154C-G 150 nt10.89□□□□□ -0.67
YLR040CQ07988 YLR236CYLR236C 324 nt10.87□□□□□ -0.67
YLR040CQ07988 PAC11YDR488C 1602 nt10.83□□□□□ -0.68
YLR040CQ07988 PIB2YGL023C 1908 nt10.82□□□□□ -0.68
YLR040CQ07988 YCL048W-AYCL048W-A 240 nt10.82□□□□□ -0.68
YLR040CQ07988 RTF1YGL244W 1677 nt10.8□□□□□ -0.68
YLR040CQ07988 BOP3YNL042W 1191 nt10.75□□□□□ -0.69
YLR040CQ07988 WHI5YOR083W 888 nt10.69□□□□□ -0.7
YLR040CQ07988 tM(CAU)CtM(CAU)C 72 nt10.67□□□□□ -0.7
YLR040CQ07988 IMT4tM(CAU)E 72 nt10.67□□□□□ -0.7
YLR040CQ07988 IMT3tM(CAU)J3 72 nt10.67□□□□□ -0.7
YLR040CQ07988 IMT1tM(CAU)O1 72 nt10.67□□□□□ -0.7
YLR040CQ07988 IMT2tM(CAU)P 72 nt10.67□□□□□ -0.7
YLR040CQ07988 YLR281CYLR281C 468 nt10.66□□□□□ -0.7
YLR040CQ07988 PTK1YKL198C 1989 nt10.63□□□□□ -0.71
YLR040CQ07988 IDH1YNL037C 1083 nt10.6□□□□□ -0.71
YLR040CQ07988 NCP1YHR042W 2076 nt10.6□□□□□ -0.71
YLR040CQ07988 PUS2YGL063W 1113 nt10.55□□□□□ -0.72
YLR040CQ07988 GBP2YCL011C 1284 nt10.55□□□□□ -0.72
YLR040CQ07988 RRD1YIL153W 1182 nt10.54□□□□□ -0.72
YLR040CQ07988 LCB1YMR296C 1677 nt10.5□□□□□ -0.73
YLR040CQ07988 FMP52YER004W 696 nt10.5□□□□□ -0.73
YLR040CQ07988 TCD2YKL027W 1344 nt10.5□□□□□ -0.73
YLR040CQ07988 YJL225CYJL225C 5277 nt10.49□□□□□ -0.73
YLR040CQ07988 IMP2'YIL154C 1041 nt10.48□□□□□ -0.73
YLR040CQ07988 DED1YOR204W 1815 nt10.46□□□□□ -0.74
YLR040CQ07988 NVJ2YPR091C 2313 nt10.45□□□□□ -0.74
YLR040CQ07988 YFL054CYFL054C 1941 nt10.45□□□□□ -0.74
YLR040CQ07988 DSK2YMR276W 1122 nt10.43□□□□□ -0.74
YLR040CQ07988 PCM1YEL058W 1674 nt10.43□□□□□ -0.74
YLR040CQ07988 SIM1YIL123W 1431 nt10.41□□□□□ -0.74
YLR040CQ07988 FMT1YBL013W 1206 nt10.39□□□□□ -0.75
YLR040CQ07988 YDR433WYDR433W 441 nt10.38□□□□□ -0.75
YLR040CQ07988 SPT8YLR055C 1809 nt10.35□□□□□ -0.75
YLR040CQ07988 CWP1YKL096W 720 nt10.35□□□□□ -0.75
YLR040CQ07988 SNF6YHL025W 999 nt10.34□□□□□ -0.75
YLR040CQ07988 ADH2YMR303C 1047 nt10.34□□□□□ -0.75
YLR040CQ07988 MXR2YCL033C 507 nt10.32□□□□□ -0.76
YLR040CQ07988 FMP45YDL222C 930 nt10.31□□□□□ -0.76
YLR040CQ07988 BIO4YNR057C 714 nt10.3□□□□□ -0.76
YLR040CQ07988 YPR011CYPR011C 981 nt10.3□□□□□ -0.76
YLR040CQ07988 YCL042WYCL042W 360 nt10.29□□□□□ -0.76
YLR040CQ07988 LYS4YDR234W 2082 nt10.29□□□□□ -0.76
YLR040CQ07988 SOR2YDL246C 1074 nt10.28□□□□□ -0.76
YLR040CQ07988 SOR1YJR159W 1074 nt10.28□□□□□ -0.76
YLR040CQ07988 ERV46YAL042W 1248 nt10.24□□□□□ -0.77
YLR040CQ07988 YKR040CYKR040C 504 nt10.22□□□□□ -0.77
YLR040CQ07988 LPX1YOR084W 1164 nt10.22□□□□□ -0.77
YLR040CQ07988 ERF2YLR246W 1080 nt10.2□□□□□ -0.78
YLR040CQ07988 YIH1YCR059C 777 nt10.18□□□□□ -0.78
YLR040CQ07988 SWE1YJL187C 2460 nt10.18□□□□□ -0.78
YLR040CQ07988 FRD1YEL047C 1413 nt10.17□□□□□ -0.78
YLR040CQ07988 MRPL8YJL063C 717 nt10.16□□□□□ -0.78
YLR040CQ07988 CRR1YLR213C 1269 nt10.15□□□□□ -0.78
YLR040CQ07988 RNQ1YCL028W 1218 nt10.15□□□□□ -0.78
YLR040CQ07988 YLL053CYLL053C 459 nt10.14□□□□□ -0.79
YLR040CQ07988 BOR1YNL275W 1731 nt10.13□□□□□ -0.79
YLR040CQ07988 HEM12YDR047W 1089 nt10.08□□□□□ -0.8
YLR040CQ07988 YHR056W-AYHR056W-A 435 nt10.06□□□□□ -0.8
YLR040CQ07988 ADO1YJR105W 1023 nt10.06□□□□□ -0.8
YLR040CQ07988 ATF2YGR177C 1608 nt10.06□□□□□ -0.8
YLR040CQ07988 FTR1YER145C 1215 nt10.05□□□□□ -0.8
YLR040CQ07988 YFL067WYFL067W 528 nt10.05□□□□□ -0.8
YLR040CQ07988 DIC1YLR348C 897 nt10.04□□□□□ -0.8
YLR040CQ07988 RDN37-1RDN37-1 5354 nt10.04□□□□□ -0.8
YLR040CQ07988 RDN37-2RDN37-2 5354 nt10.04□□□□□ -0.8
YLR040CQ07988 MIC10YCL057C-A 294 nt10.03□□□□□ -0.8
YLR040CQ07988 GAL1YBR020W 1587 nt10.01□□□□□ -0.81
YLR040CQ07988 SNG1YGR197C 1644 nt10□□□□□ -0.81
YLR040CQ07988 DDR2YOL052C-A 186 nt10□□□□□ -0.81
YLR040CQ07988 TRM5YHR070W 1500 nt10□□□□□ -0.81
YLR040CQ07988 RAX1YOR301W 1308 nt10□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms