Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 UBX6YJL048C 1191 nt12.42□□□□□ -0.42
CAF120P53836 YPS1YLR120C 1710 nt12.39□□□□□ -0.43
CAF120P53836 MEP2YNL142W 1500 nt12.37□□□□□ -0.43
CAF120P53836 SSA4YER103W 1929 nt12.36□□□□□ -0.43
CAF120P53836 YLR236CYLR236C 324 nt12.34□□□□□ -0.43
CAF120P53836 FUN26YAL022C 1554 nt12.31□□□□□ -0.44
CAF120P53836 YEL076C-AYEL076C-A 651 nt12.31□□□□□ -0.44
CAF120P53836 YEL076CYEL076C 651 nt12.31□□□□□ -0.44
CAF120P53836 YLR464WYLR464W 651 nt12.31□□□□□ -0.44
CAF120P53836 TRM9YML014W 840 nt12.29□□□□□ -0.44
CAF120P53836 YDR095CYDR095C 411 nt12.28□□□□□ -0.44
CAF120P53836 YHR165W-AYHR165W-A 312 nt12.26□□□□□ -0.45
CAF120P53836 YLR154C-GYLR154C-G 150 nt12.23□□□□□ -0.45
CAF120P53836 SIS1YNL007C 1059 nt12.18□□□□□ -0.46
CAF120P53836 ALF1YNL148C 765 nt12.17□□□□□ -0.46
CAF120P53836 DCW1YKL046C 1350 nt12.17□□□□□ -0.46
CAF120P53836 CCT6YDR188W 1641 nt12.16□□□□□ -0.46
CAF120P53836 RTG1YOL067C 534 nt12.16□□□□□ -0.46
CAF120P53836 SPP1YPL138C 1062 nt12.14□□□□□ -0.47
CAF120P53836 LPX1YOR084W 1164 nt12.12□□□□□ -0.47
CAF120P53836 ERV46YAL042W 1248 nt12.1□□□□□ -0.47
CAF120P53836 SUF2tP(AGG)C 72 nt12.08□□□□□ -0.48
CAF120P53836 SUF10tP(AGG)N 72 nt12.08□□□□□ -0.48
CAF120P53836 RPP2AYOL039W 321 nt12.05□□□□□ -0.48
CAF120P53836 PTP1YDL230W 1008 nt12.03□□□□□ -0.48
CAF120P53836 YDR094WYDR094W 336 nt12.03□□□□□ -0.48
CAF120P53836 EMI2YDR516C 1503 nt12.01□□□□□ -0.49
CAF120P53836 YFL015W-AYFL015W-A 318 nt11.99□□□□□ -0.49
CAF120P53836 HUA1YGR268C 597 nt11.99□□□□□ -0.49
CAF120P53836 YJL152WYJL152W 360 nt11.99□□□□□ -0.49
CAF120P53836 IDH1YNL037C 1083 nt11.98□□□□□ -0.49
CAF120P53836 YKR040CYKR040C 504 nt11.97□□□□□ -0.49
CAF120P53836 CAC2YML102W 1407 nt11.96□□□□□ -0.49
CAF120P53836 YDR433WYDR433W 441 nt11.96□□□□□ -0.49
CAF120P53836 YMR090WYMR090W 684 nt11.95□□□□□ -0.5
CAF120P53836 YDL221WYDL221W 552 nt11.92□□□□□ -0.5
CAF120P53836 BDF1YLR399C 2061 nt11.9□□□□□ -0.5
CAF120P53836 YBR220CYBR220C 1683 nt11.87□□□□□ -0.51
CAF120P53836 SDH1YKL148C 1923 nt11.81□□□□□ -0.52
CAF120P53836 ART5YGR068C 1761 nt11.81□□□□□ -0.52
CAF120P53836 VAR1Q0140 1197 nt11.8□□□□□ -0.52
CAF120P53836 NME1NME1 340 nt11.8□□□□□ -0.52
CAF120P53836 GBP2YCL011C 1284 nt11.79□□□□□ -0.52
CAF120P53836 GFD2YCL036W 1701 nt11.79□□□□□ -0.52
CAF120P53836 IRC15YPL017C 1500 nt11.78□□□□□ -0.52
CAF120P53836 TAT1YBR069C 1860 nt11.75□□□□□ -0.53
CAF120P53836 PET9YBL030C 957 nt11.75□□□□□ -0.53
CAF120P53836 MXR2YCL033C 507 nt11.75□□□□□ -0.53
CAF120P53836 TIR4YOR009W 1464 nt11.75□□□□□ -0.53
CAF120P53836 PAC11YDR488C 1602 nt11.72□□□□□ -0.53
CAF120P53836 NVJ2YPR091C 2313 nt11.72□□□□□ -0.53
CAF120P53836 GIS3YLR094C 1509 nt11.7□□□□□ -0.54
CAF120P53836 SCC4YER147C 1875 nt11.7□□□□□ -0.54
CAF120P53836 SBA1YKL117W 651 nt11.7□□□□□ -0.54
CAF120P53836 RTS2YOR077W 699 nt11.66□□□□□ -0.54
CAF120P53836 YMR057CYMR057C 372 nt11.62□□□□□ -0.55
CAF120P53836 CUE1YMR264W 612 nt11.58□□□□□ -0.56
CAF120P53836 CSM2YIL132C 642 nt11.57□□□□□ -0.56
CAF120P53836 TCD2YKL027W 1344 nt11.57□□□□□ -0.56
CAF120P53836 YKL030WYKL030W 606 nt11.54□□□□□ -0.56
CAF120P53836 FPS1YLL043W 2010 nt11.53□□□□□ -0.56
CAF120P53836 YCL048W-AYCL048W-A 240 nt11.53□□□□□ -0.56
CAF120P53836 FRD1YEL047C 1413 nt11.5□□□□□ -0.57
CAF120P53836 PAU16YKL224C 372 nt11.49□□□□□ -0.57
CAF120P53836 PTH1YHR189W 573 nt11.48□□□□□ -0.57
CAF120P53836 SEC11YIR022W 504 nt11.48□□□□□ -0.57
CAF120P53836 YLR235CYLR235C 399 nt11.47□□□□□ -0.57
CAF120P53836 RRT5YFR032C 870 nt11.44□□□□□ -0.58
CAF120P53836 PAU21YOR394W 495 nt11.44□□□□□ -0.58
CAF120P53836 PAU22YPL282C 495 nt11.44□□□□□ -0.58
CAF120P53836 YSC84YHR016C 1407 nt11.43□□□□□ -0.58
CAF120P53836 PCH2YBR186W 1695 nt11.43□□□□□ -0.58
CAF120P53836 YIL100WYIL100W 354 nt11.43□□□□□ -0.58
CAF120P53836 YFR018CYFR018C 1092 nt11.4□□□□□ -0.58
CAF120P53836 LCB1YMR296C 1677 nt11.39□□□□□ -0.59
CAF120P53836 YHL050CYHL050C 2094 nt11.39□□□□□ -0.59
CAF120P53836 GUT2YIL155C 1950 nt11.38□□□□□ -0.59
CAF120P53836 YDR509WYDR509W 348 nt11.38□□□□□ -0.59
CAF120P53836 YCL042WYCL042W 360 nt11.38□□□□□ -0.59
CAF120P53836 DED1YOR204W 1815 nt11.37□□□□□ -0.59
CAF120P53836 RRT12YCR045C 1476 nt11.37□□□□□ -0.59
CAF120P53836 YNL195CYNL195C 786 nt11.35□□□□□ -0.59
CAF120P53836 PAM17YKR065C 594 nt11.33□□□□□ -0.6
CAF120P53836 ARO7YPR060C 771 nt11.33□□□□□ -0.6
CAF120P53836 tL(GAG)GtL(GAG)G 82 nt11.29□□□□□ -0.6
CAF120P53836 RRD1YIL153W 1182 nt11.29□□□□□ -0.6
CAF120P53836 PRE6YOL038W 765 nt11.27□□□□□ -0.61
CAF120P53836 SNF6YHL025W 999 nt11.26□□□□□ -0.61
CAF120P53836 SOR2YDL246C 1074 nt11.25□□□□□ -0.61
CAF120P53836 SOR1YJR159W 1074 nt11.25□□□□□ -0.61
CAF120P53836 PIB2YGL023C 1908 nt11.21□□□□□ -0.61
CAF120P53836 FMT1YBL013W 1206 nt11.21□□□□□ -0.61
CAF120P53836 RTF1YGL244W 1677 nt11.17□□□□□ -0.62
CAF120P53836 FMP52YER004W 696 nt11.16□□□□□ -0.62
CAF120P53836 DIC1YLR348C 897 nt11.16□□□□□ -0.62
CAF120P53836 TIM23YNR017W 669 nt11.15□□□□□ -0.62
CAF120P53836 NAT4YMR069W 858 nt11.13□□□□□ -0.63
CAF120P53836 BOP3YNL042W 1191 nt11.12□□□□□ -0.63
CAF120P53836 REG2YBR050C 1017 nt11.11□□□□□ -0.63
CAF120P53836 YPR064WYPR064W 420 nt11.1□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms