Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 ALF1YNL148C 765 nt14.66□□□□□ -0.06
RPT4P53549 SUF2tP(AGG)C 72 nt14.65□□□□□ -0.06
RPT4P53549 SUF10tP(AGG)N 72 nt14.65□□□□□ -0.06
RPT4P53549 YPS1YLR120C 1710 nt14.58□□□□□ -0.07
RPT4P53549 YDR095CYDR095C 411 nt14.58□□□□□ -0.08
RPT4P53549 YJL152WYJL152W 360 nt14.58□□□□□ -0.08
RPT4P53549 MRPL8YJL063C 717 nt14.57□□□□□ -0.08
RPT4P53549 LPX1YOR084W 1164 nt14.57□□□□□ -0.08
RPT4P53549 ERV46YAL042W 1248 nt14.51□□□□□ -0.09
RPT4P53549 SPP1YPL138C 1062 nt14.5□□□□□ -0.09
RPT4P53549 SIS1YNL007C 1059 nt14.49□□□□□ -0.09
RPT4P53549 IDH1YNL037C 1083 nt14.44□□□□□ -0.1
RPT4P53549 TIR4YOR009W 1464 nt14.43□□□□□ -0.1
RPT4P53549 YDR433WYDR433W 441 nt14.38□□□□□ -0.11
RPT4P53549 YHR165W-AYHR165W-A 312 nt14.37□□□□□ -0.11
RPT4P53549 RTG1YOL067C 534 nt14.36□□□□□ -0.11
RPT4P53549 YEL076C-AYEL076C-A 651 nt14.35□□□□□ -0.11
RPT4P53549 YEL076CYEL076C 651 nt14.35□□□□□ -0.11
RPT4P53549 YLR464WYLR464W 651 nt14.35□□□□□ -0.11
RPT4P53549 ADO1YJR105W 1023 nt14.34□□□□□ -0.11
RPT4P53549 YKR040CYKR040C 504 nt14.33□□□□□ -0.12
RPT4P53549 GBP2YCL011C 1284 nt14.3□□□□□ -0.12
RPT4P53549 RPP2AYOL039W 321 nt14.29□□□□□ -0.12
RPT4P53549 MXR2YCL033C 507 nt14.29□□□□□ -0.12
RPT4P53549 UBX6YJL048C 1191 nt14.26□□□□□ -0.13
RPT4P53549 PTP1YDL230W 1008 nt14.24□□□□□ -0.13
RPT4P53549 ART5YGR068C 1761 nt14.23□□□□□ -0.13
RPT4P53549 CAC2YML102W 1407 nt14.2□□□□□ -0.14
RPT4P53549 YMR057CYMR057C 372 nt14.19□□□□□ -0.14
RPT4P53549 PET9YBL030C 957 nt14.16□□□□□ -0.14
RPT4P53549 MEP2YNL142W 1500 nt14.15□□□□□ -0.14
RPT4P53549 GFD2YCL036W 1701 nt14.14□□□□□ -0.15
RPT4P53549 SPT5YML010W 3192 nt14.12□□□□□ -0.15
RPT4P53549 YCL048W-AYCL048W-A 240 nt14.11□□□□□ -0.15
RPT4P53549 TCD2YKL027W 1344 nt14.05□□□□□ -0.16
RPT4P53549 DED1YOR204W 1815 nt14.01□□□□□ -0.17
RPT4P53549 FRD1YEL047C 1413 nt13.99□□□□□ -0.17
RPT4P53549 HUA1YGR268C 597 nt13.99□□□□□ -0.17
RPT4P53549 DCW1YKL046C 1350 nt13.98□□□□□ -0.17
RPT4P53549 RRD1YIL153W 1182 nt13.97□□□□□ -0.17
RPT4P53549 FPS1YLL043W 2010 nt13.95□□□□□ -0.18
RPT4P53549 YDR094WYDR094W 336 nt13.91□□□□□ -0.18
RPT4P53549 RTS2YOR077W 699 nt13.91□□□□□ -0.18
RPT4P53549 PTH1YHR189W 573 nt13.86□□□□□ -0.19
RPT4P53549 FMT1YBL013W 1206 nt13.86□□□□□ -0.19
RPT4P53549 IRC15YPL017C 1500 nt13.82□□□□□ -0.2
RPT4P53549 SOR2YDL246C 1074 nt13.8□□□□□ -0.2
RPT4P53549 YFL015W-AYFL015W-A 318 nt13.8□□□□□ -0.2
RPT4P53549 SOR1YJR159W 1074 nt13.8□□□□□ -0.2
RPT4P53549 EMI2YDR516C 1503 nt13.8□□□□□ -0.2
RPT4P53549 YCL042WYCL042W 360 nt13.78□□□□□ -0.2
RPT4P53549 YKL030WYKL030W 606 nt13.77□□□□□ -0.21
RPT4P53549 CUE1YMR264W 612 nt13.76□□□□□ -0.21
RPT4P53549 YLR235CYLR235C 399 nt13.74□□□□□ -0.21
RPT4P53549 YDL221WYDL221W 552 nt13.73□□□□□ -0.21
RPT4P53549 LCB1YMR296C 1677 nt13.7□□□□□ -0.22
RPT4P53549 GIS3YLR094C 1509 nt13.68□□□□□ -0.22
RPT4P53549 FMP52YER004W 696 nt13.63□□□□□ -0.23
RPT4P53549 CWP1YKL096W 720 nt13.62□□□□□ -0.23
RPT4P53549 ADH2YMR303C 1047 nt13.6□□□□□ -0.23
RPT4P53549 YMR090WYMR090W 684 nt13.57□□□□□ -0.24
RPT4P53549 YIL100WYIL100W 354 nt13.54□□□□□ -0.24
RPT4P53549 TIM23YNR017W 669 nt13.5□□□□□ -0.25
RPT4P53549 PAU16YKL224C 372 nt13.48□□□□□ -0.25
RPT4P53549 DIC1YLR348C 897 nt13.48□□□□□ -0.25
RPT4P53549 SDH1YKL148C 1923 nt13.47□□□□□ -0.25
RPT4P53549 SCC4YER147C 1875 nt13.46□□□□□ -0.25
RPT4P53549 YFR018CYFR018C 1092 nt13.45□□□□□ -0.26
RPT4P53549 tL(GAG)GtL(GAG)G 82 nt13.44□□□□□ -0.26
RPT4P53549 PCM1YEL058W 1674 nt13.44□□□□□ -0.26
RPT4P53549 PRE6YOL038W 765 nt13.43□□□□□ -0.26
RPT4P53549 SNF6YHL025W 999 nt13.4□□□□□ -0.26
RPT4P53549 SBA1YKL117W 651 nt13.39□□□□□ -0.27
RPT4P53549 YLR179CYLR179C 606 nt13.39□□□□□ -0.27
RPT4P53549 YBR220CYBR220C 1683 nt13.37□□□□□ -0.27
RPT4P53549 YIH1YCR059C 777 nt13.34□□□□□ -0.27
RPT4P53549 RNQ1YCL028W 1218 nt13.34□□□□□ -0.27
RPT4P53549 SSA4YER103W 1929 nt13.33□□□□□ -0.28
RPT4P53549 RRT5YFR032C 870 nt13.33□□□□□ -0.28
RPT4P53549 WSC2YNL283C 1512 nt13.33□□□□□ -0.28
RPT4P53549 YPR064WYPR064W 420 nt13.32□□□□□ -0.28
RPT4P53549 TAD3YLR316C 969 nt13.29□□□□□ -0.28
RPT4P53549 AHT1YHR093W 549 nt13.28□□□□□ -0.28
RPT4P53549 YFL066CYFL066C 1179 nt13.2□□□□□ -0.3
RPT4P53549 RRT12YCR045C 1476 nt13.18□□□□□ -0.3
RPT4P53549 YLL053CYLL053C 459 nt13.18□□□□□ -0.3
RPT4P53549 YNL195CYNL195C 786 nt13.18□□□□□ -0.3
RPT4P53549 BIO4YNR057C 714 nt13.14□□□□□ -0.31
RPT4P53549 PEX25YPL112C 1185 nt13.14□□□□□ -0.31
RPT4P53549 FTR1YER145C 1215 nt13.11□□□□□ -0.31
RPT4P53549 YSC84YHR016C 1407 nt13.11□□□□□ -0.31
RPT4P53549 BDH1YAL060W 1149 nt13.1□□□□□ -0.31
RPT4P53549 YSP3YOR003W 1437 nt13.09□□□□□ -0.31
RPT4P53549 GAL1YBR020W 1587 nt13.08□□□□□ -0.32
RPT4P53549 AQY1YPR192W 918 nt13.08□□□□□ -0.32
RPT4P53549 SIM1YIL123W 1431 nt13.06□□□□□ -0.32
RPT4P53549 YHL050CYHL050C 2094 nt13.05□□□□□ -0.32
RPT4P53549 YNL115CYNL115C 1935 nt13.04□□□□□ -0.32
RPT4P53549 TRM5YHR070W 1500 nt13.03□□□□□ -0.32
RPT4P53549 YLR415CYLR415C 339 nt12.99□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 104.5 ms