Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 YDR095CYDR095C 411 nt11.52□□□□□ -0.57
TRM9P49957 YPR011CYPR011C 981 nt11.48□□□□□ -0.57
TRM9P49957 YLR236CYLR236C 324 nt11.45□□□□□ -0.58
TRM9P49957 FMP45YDL222C 930 nt11.43□□□□□ -0.58
TRM9P49957 SIS1YNL007C 1059 nt11.43□□□□□ -0.58
TRM9P49957 YCH1YGR203W 447 nt11.38□□□□□ -0.59
TRM9P49957 YHR165W-AYHR165W-A 312 nt11.35□□□□□ -0.59
TRM9P49957 YJL152WYJL152W 360 nt11.33□□□□□ -0.6
TRM9P49957 SPT5YML010W 3192 nt11.31□□□□□ -0.6
TRM9P49957 ERV46YAL042W 1248 nt11.3□□□□□ -0.6
TRM9P49957 RPP2AYOL039W 321 nt11.29□□□□□ -0.6
TRM9P49957 MRPL8YJL063C 717 nt11.28□□□□□ -0.6
TRM9P49957 IDH1YNL037C 1083 nt11.28□□□□□ -0.6
TRM9P49957 TIR4YOR009W 1464 nt11.26□□□□□ -0.61
TRM9P49957 LPX1YOR084W 1164 nt11.24□□□□□ -0.61
TRM9P49957 MEP2YNL142W 1500 nt11.24□□□□□ -0.61
TRM9P49957 PTP1YDL230W 1008 nt11.22□□□□□ -0.61
TRM9P49957 PET9YBL030C 957 nt11.18□□□□□ -0.62
TRM9P49957 ART5YGR068C 1761 nt11.16□□□□□ -0.62
TRM9P49957 YKR040CYKR040C 504 nt11.16□□□□□ -0.62
TRM9P49957 CAC2YML102W 1407 nt11.15□□□□□ -0.62
TRM9P49957 YDR433WYDR433W 441 nt11.13□□□□□ -0.63
TRM9P49957 GBP2YCL011C 1284 nt11.13□□□□□ -0.63
TRM9P49957 GFD2YCL036W 1701 nt11.11□□□□□ -0.63
TRM9P49957 ADO1YJR105W 1023 nt11.1□□□□□ -0.63
TRM9P49957 SPP1YPL138C 1062 nt11.09□□□□□ -0.63
TRM9P49957 YMR057CYMR057C 372 nt11.08□□□□□ -0.64
TRM9P49957 YEL076C-AYEL076C-A 651 nt11.06□□□□□ -0.64
TRM9P49957 YEL076CYEL076C 651 nt11.06□□□□□ -0.64
TRM9P49957 YLR464WYLR464W 651 nt11.06□□□□□ -0.64
TRM9P49957 RTG1YOL067C 534 nt11.06□□□□□ -0.64
TRM9P49957 YCL048W-AYCL048W-A 240 nt11.06□□□□□ -0.64
TRM9P49957 MXR2YCL033C 507 nt11.02□□□□□ -0.65
TRM9P49957 DCW1YKL046C 1350 nt11.02□□□□□ -0.65
TRM9P49957 TCD2YKL027W 1344 nt10.99□□□□□ -0.65
TRM9P49957 SSA4YER103W 1929 nt10.97□□□□□ -0.65
TRM9P49957 PAC11YDR488C 1602 nt10.97□□□□□ -0.65
TRM9P49957 FPS1YLL043W 2010 nt10.95□□□□□ -0.66
TRM9P49957 EMI2YDR516C 1503 nt10.93□□□□□ -0.66
TRM9P49957 DED1YOR204W 1815 nt10.93□□□□□ -0.66
TRM9P49957 RRD1YIL153W 1182 nt10.9□□□□□ -0.66
TRM9P49957 IRC15YPL017C 1500 nt10.89□□□□□ -0.67
TRM9P49957 FRD1YEL047C 1413 nt10.89□□□□□ -0.67
TRM9P49957 YDL221WYDL221W 552 nt10.88□□□□□ -0.67
TRM9P49957 CUE1YMR264W 612 nt10.86□□□□□ -0.67
TRM9P49957 RTS2YOR077W 699 nt10.86□□□□□ -0.67
TRM9P49957 NVJ2YPR091C 2313 nt10.86□□□□□ -0.67
TRM9P49957 YMR090WYMR090W 684 nt10.85□□□□□ -0.67
TRM9P49957 SOR2YDL246C 1074 nt10.83□□□□□ -0.68
TRM9P49957 HUA1YGR268C 597 nt10.83□□□□□ -0.68
TRM9P49957 SOR1YJR159W 1074 nt10.83□□□□□ -0.68
TRM9P49957 UBX6YJL048C 1191 nt10.81□□□□□ -0.68
TRM9P49957 FMT1YBL013W 1206 nt10.79□□□□□ -0.68
TRM9P49957 GIS3YLR094C 1509 nt10.78□□□□□ -0.68
TRM9P49957 FMP52YER004W 696 nt10.77□□□□□ -0.69
TRM9P49957 YCL042WYCL042W 360 nt10.77□□□□□ -0.69
TRM9P49957 YLR235CYLR235C 399 nt10.74□□□□□ -0.69
TRM9P49957 YDR094WYDR094W 336 nt10.71□□□□□ -0.69
TRM9P49957 SDH1YKL148C 1923 nt10.7□□□□□ -0.7
TRM9P49957 YKL030WYKL030W 606 nt10.7□□□□□ -0.7
TRM9P49957 YIL100WYIL100W 354 nt10.69□□□□□ -0.7
TRM9P49957 BDF1YLR399C 2061 nt10.69□□□□□ -0.7
TRM9P49957 SCC4YER147C 1875 nt10.68□□□□□ -0.7
TRM9P49957 PTH1YHR189W 573 nt10.67□□□□□ -0.7
TRM9P49957 YBR220CYBR220C 1683 nt10.64□□□□□ -0.71
TRM9P49957 LCB1YMR296C 1677 nt10.61□□□□□ -0.71
TRM9P49957 CWP1YKL096W 720 nt10.61□□□□□ -0.71
TRM9P49957 ADH2YMR303C 1047 nt10.6□□□□□ -0.71
TRM9P49957 TAT1YBR069C 1860 nt10.55□□□□□ -0.72
TRM9P49957 PCM1YEL058W 1674 nt10.54□□□□□ -0.72
TRM9P49957 YFL015W-AYFL015W-A 318 nt10.53□□□□□ -0.72
TRM9P49957 DIC1YLR348C 897 nt10.52□□□□□ -0.73
TRM9P49957 TIM23YNR017W 669 nt10.52□□□□□ -0.73
TRM9P49957 SNF6YHL025W 999 nt10.51□□□□□ -0.73
TRM9P49957 YIH1YCR059C 777 nt10.48□□□□□ -0.73
TRM9P49957 RNQ1YCL028W 1218 nt10.48□□□□□ -0.73
TRM9P49957 tL(GAG)GtL(GAG)G 82 nt10.47□□□□□ -0.73
TRM9P49957 YNL195CYNL195C 786 nt10.45□□□□□ -0.74
TRM9P49957 YFR018CYFR018C 1092 nt10.44□□□□□ -0.74
TRM9P49957 YLR179CYLR179C 606 nt10.43□□□□□ -0.74
TRM9P49957 YPR064WYPR064W 420 nt10.41□□□□□ -0.74
TRM9P49957 AHT1YHR093W 549 nt10.39□□□□□ -0.75
TRM9P49957 WSC2YNL283C 1512 nt10.38□□□□□ -0.75
TRM9P49957 RDN37-1RDN37-1 5354 nt10.37□□□□□ -0.75
TRM9P49957 RDN37-2RDN37-2 5354 nt10.37□□□□□ -0.75
TRM9P49957 TAD3YLR316C 969 nt10.37□□□□□ -0.75
TRM9P49957 RRT12YCR045C 1476 nt10.36□□□□□ -0.75
TRM9P49957 YJL225CYJL225C 5277 nt10.35□□□□□ -0.75
TRM9P49957 YSC84YHR016C 1407 nt10.34□□□□□ -0.75
TRM9P49957 AQY1YPR192W 918 nt10.34□□□□□ -0.75
TRM9P49957 YHL050CYHL050C 2094 nt10.34□□□□□ -0.75
TRM9P49957 PAU16YKL224C 372 nt10.32□□□□□ -0.76
TRM9P49957 RRT5YFR032C 870 nt10.31□□□□□ -0.76
TRM9P49957 YLL053CYLL053C 459 nt10.31□□□□□ -0.76
TRM9P49957 BIO4YNR057C 714 nt10.31□□□□□ -0.76
TRM9P49957 FTR1YER145C 1215 nt10.29□□□□□ -0.76
TRM9P49957 PRE6YOL038W 765 nt10.27□□□□□ -0.77
TRM9P49957 SEC11YIR022W 504 nt10.26□□□□□ -0.77
TRM9P49957 SIM1YIL123W 1431 nt10.25□□□□□ -0.77
TRM9P49957 GAL1YBR020W 1587 nt10.25□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms