Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YEL076C-AYEL076C-A 651 nt19.55■□□□□ 0.72
TY1B-JR1P47098 YEL076CYEL076C 651 nt19.55■□□□□ 0.72
TY1B-JR1P47098 YLR464WYLR464W 651 nt19.55■□□□□ 0.72
TY1B-JR1P47098 DAL1YIR027C 1383 nt19.49■□□□□ 0.71
TY1B-JR1P47098 TRM9YML014W 840 nt19.48■□□□□ 0.71
TY1B-JR1P47098 ADO1YJR105W 1023 nt19.47■□□□□ 0.71
TY1B-JR1P47098 FUN26YAL022C 1554 nt19.46■□□□□ 0.71
TY1B-JR1P47098 INM2YDR287W 879 nt19.44■□□□□ 0.7
TY1B-JR1P47098 ERV46YAL042W 1248 nt19.44■□□□□ 0.7
TY1B-JR1P47098 YJL152WYJL152W 360 nt19.39■□□□□ 0.7
TY1B-JR1P47098 CCT6YDR188W 1641 nt19.33■□□□□ 0.69
TY1B-JR1P47098 MXR2YCL033C 507 nt19.27■□□□□ 0.67
TY1B-JR1P47098 SIS1YNL007C 1059 nt19.19■□□□□ 0.66
TY1B-JR1P47098 IDH1YNL037C 1083 nt19.18■□□□□ 0.66
TY1B-JR1P47098 YDR094WYDR094W 336 nt19.14■□□□□ 0.65
TY1B-JR1P47098 YDR433WYDR433W 441 nt19.12■□□□□ 0.65
TY1B-JR1P47098 YFL015W-AYFL015W-A 318 nt19.06■□□□□ 0.64
TY1B-JR1P47098 ALF1YNL148C 765 nt19.06■□□□□ 0.64
TY1B-JR1P47098 SUF2tP(AGG)C 72 nt19.05■□□□□ 0.64
TY1B-JR1P47098 SUF10tP(AGG)N 72 nt19.05■□□□□ 0.64
TY1B-JR1P47098 TIR4YOR009W 1464 nt19.04■□□□□ 0.64
TY1B-JR1P47098 GBP2YCL011C 1284 nt18.98■□□□□ 0.63
TY1B-JR1P47098 YKR040CYKR040C 504 nt18.95■□□□□ 0.62
TY1B-JR1P47098 YPS1YLR120C 1710 nt18.94■□□□□ 0.62
TY1B-JR1P47098 YDR095CYDR095C 411 nt18.91■□□□□ 0.62
TY1B-JR1P47098 PTH1YHR189W 573 nt18.86■□□□□ 0.61
TY1B-JR1P47098 HUA1YGR268C 597 nt18.83■□□□□ 0.6
TY1B-JR1P47098 SBA1YKL117W 651 nt18.7■□□□□ 0.58
TY1B-JR1P47098 YCL048W-AYCL048W-A 240 nt18.65■□□□□ 0.58
TY1B-JR1P47098 FRD1YEL047C 1413 nt18.6■□□□□ 0.57
TY1B-JR1P47098 PAU16YKL224C 372 nt18.6■□□□□ 0.57
TY1B-JR1P47098 TCD2YKL027W 1344 nt18.58■□□□□ 0.56
TY1B-JR1P47098 YHR165W-AYHR165W-A 312 nt18.56■□□□□ 0.56
TY1B-JR1P47098 CAC2YML102W 1407 nt18.54■□□□□ 0.56
TY1B-JR1P47098 ART5YGR068C 1761 nt18.54■□□□□ 0.56
TY1B-JR1P47098 YMR057CYMR057C 372 nt18.53■□□□□ 0.56
TY1B-JR1P47098 GFD2YCL036W 1701 nt18.5■□□□□ 0.55
TY1B-JR1P47098 DED1YOR204W 1815 nt18.48■□□□□ 0.55
TY1B-JR1P47098 PRE6YOL038W 765 nt18.47■□□□□ 0.55
TY1B-JR1P47098 RPP2AYOL039W 321 nt18.37■□□□□ 0.53
TY1B-JR1P47098 RTS2YOR077W 699 nt18.37■□□□□ 0.53
TY1B-JR1P47098 SOR2YDL246C 1074 nt18.37■□□□□ 0.53
TY1B-JR1P47098 SOR1YJR159W 1074 nt18.37■□□□□ 0.53
TY1B-JR1P47098 PTP1YDL230W 1008 nt18.36■□□□□ 0.53
TY1B-JR1P47098 RRD1YIL153W 1182 nt18.35■□□□□ 0.53
TY1B-JR1P47098 LCB1YMR296C 1677 nt18.34■□□□□ 0.53
TY1B-JR1P47098 YLR235CYLR235C 399 nt18.3■□□□□ 0.52
TY1B-JR1P47098 YKL030WYKL030W 606 nt18.28■□□□□ 0.52
TY1B-JR1P47098 YCL042WYCL042W 360 nt18.26■□□□□ 0.51
TY1B-JR1P47098 FMT1YBL013W 1206 nt18.25■□□□□ 0.51
TY1B-JR1P47098 YFR018CYFR018C 1092 nt18.22■□□□□ 0.51
TY1B-JR1P47098 PET9YBL030C 957 nt18.22■□□□□ 0.51
TY1B-JR1P47098 FPS1YLL043W 2010 nt18.14■□□□□ 0.49
TY1B-JR1P47098 TIM23YNR017W 669 nt18.05■□□□□ 0.48
TY1B-JR1P47098 DCW1YKL046C 1350 nt18.02■□□□□ 0.48
TY1B-JR1P47098 tL(GAG)GtL(GAG)G 82 nt18.02■□□□□ 0.48
TY1B-JR1P47098 MEP2YNL142W 1500 nt17.95■□□□□ 0.46
TY1B-JR1P47098 RRT5YFR032C 870 nt17.94■□□□□ 0.46
TY1B-JR1P47098 SNF6YHL025W 999 nt17.93■□□□□ 0.46
TY1B-JR1P47098 CWP1YKL096W 720 nt17.92■□□□□ 0.46
TY1B-JR1P47098 DIC1YLR348C 897 nt17.91■□□□□ 0.46
TY1B-JR1P47098 YLR179CYLR179C 606 nt17.87■□□□□ 0.45
TY1B-JR1P47098 CUE1YMR264W 612 nt17.85■□□□□ 0.45
TY1B-JR1P47098 ADH2YMR303C 1047 nt17.84■□□□□ 0.45
TY1B-JR1P47098 IRC15YPL017C 1500 nt17.82■□□□□ 0.44
TY1B-JR1P47098 FMP52YER004W 696 nt17.76■□□□□ 0.43
TY1B-JR1P47098 YFL066CYFL066C 1179 nt17.75■□□□□ 0.43
TY1B-JR1P47098 PEX25YPL112C 1185 nt17.69■□□□□ 0.42
TY1B-JR1P47098 YPR064WYPR064W 420 nt17.69■□□□□ 0.42
TY1B-JR1P47098 WSC2YNL283C 1512 nt17.67■□□□□ 0.42
TY1B-JR1P47098 EMI2YDR516C 1503 nt17.66■□□□□ 0.42
TY1B-JR1P47098 TAD3YLR316C 969 nt17.56■□□□□ 0.4
TY1B-JR1P47098 NAT4YMR069W 858 nt17.52■□□□□ 0.4
TY1B-JR1P47098 YIL100WYIL100W 354 nt17.51■□□□□ 0.39
TY1B-JR1P47098 SPT5YML010W 3192 nt17.49■□□□□ 0.39
TY1B-JR1P47098 YDL221WYDL221W 552 nt17.49■□□□□ 0.39
TY1B-JR1P47098 GIS3YLR094C 1509 nt17.47■□□□□ 0.39
TY1B-JR1P47098 YIH1YCR059C 777 nt17.45■□□□□ 0.38
TY1B-JR1P47098 GLK1YCL040W 1503 nt17.45■□□□□ 0.38
TY1B-JR1P47098 YNL115CYNL115C 1935 nt17.42■□□□□ 0.38
TY1B-JR1P47098 MSF1YPR047W 1410 nt17.4■□□□□ 0.38
TY1B-JR1P47098 MIR1YJR077C 936 nt17.4■□□□□ 0.38
TY1B-JR1P47098 PCM1YEL058W 1674 nt17.39■□□□□ 0.37
TY1B-JR1P47098 YSP3YOR003W 1437 nt17.39■□□□□ 0.37
TY1B-JR1P47098 AHT1YHR093W 549 nt17.38■□□□□ 0.37
TY1B-JR1P47098 YSC84YHR016C 1407 nt17.33■□□□□ 0.37
TY1B-JR1P47098 YMR244WYMR244W 1068 nt17.32■□□□□ 0.36
TY1B-JR1P47098 BDH1YAL060W 1149 nt17.3■□□□□ 0.36
TY1B-JR1P47098 YLL053CYLL053C 459 nt17.3■□□□□ 0.36
TY1B-JR1P47098 RNQ1YCL028W 1218 nt17.28■□□□□ 0.36
TY1B-JR1P47098 FTR1YER145C 1215 nt17.24■□□□□ 0.35
TY1B-JR1P47098 YLR415CYLR415C 339 nt17.22■□□□□ 0.35
TY1B-JR1P47098 BIO4YNR057C 714 nt17.2■□□□□ 0.34
TY1B-JR1P47098 THI74YDR438W 1113 nt17.17■□□□□ 0.34
TY1B-JR1P47098 SDH1YKL148C 1923 nt17.17■□□□□ 0.34
TY1B-JR1P47098 SCC4YER147C 1875 nt17.16■□□□□ 0.34
TY1B-JR1P47098 GLR1YPL091W 1452 nt17.15■□□□□ 0.34
TY1B-JR1P47098 TRM5YHR070W 1500 nt17.12■□□□□ 0.33
TY1B-JR1P47098 RBG2YGR173W 1107 nt17.1■□□□□ 0.33
TY1B-JR1P47098 GAL1YBR020W 1587 nt17.09■□□□□ 0.33
Retrieved 100 of 7,029 protein–RNA pairs in 25 ms