Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YLR281CYLR281C 468 nt12.19□□□□□ -0.46
TY4A-JP47023 CCT6YDR188W 1641 nt12.18□□□□□ -0.46
TY4A-JP47023 DCW1YKL046C 1350 nt12.12□□□□□ -0.47
TY4A-JP47023 YPS1YLR120C 1710 nt12.11□□□□□ -0.47
TY4A-JP47023 WHI5YOR083W 888 nt12.1□□□□□ -0.47
TY4A-JP47023 RDN37-1RDN37-1 5354 nt12.09□□□□□ -0.47
TY4A-JP47023 RDN37-2RDN37-2 5354 nt12.09□□□□□ -0.47
TY4A-JP47023 YMR090WYMR090W 684 nt12.07□□□□□ -0.48
TY4A-JP47023 YDR095CYDR095C 411 nt12.06□□□□□ -0.48
TY4A-JP47023 PUS2YGL063W 1113 nt12.06□□□□□ -0.48
TY4A-JP47023 YBR220CYBR220C 1683 nt12.05□□□□□ -0.48
TY4A-JP47023 FRE6YLL051C 2139 nt12.04□□□□□ -0.48
TY4A-JP47023 EMI2YDR516C 1503 nt12□□□□□ -0.49
TY4A-JP47023 YHR165W-AYHR165W-A 312 nt11.98□□□□□ -0.49
TY4A-JP47023 SUF2tP(AGG)C 72 nt11.97□□□□□ -0.49
TY4A-JP47023 SUF10tP(AGG)N 72 nt11.97□□□□□ -0.49
TY4A-JP47023 ALF1YNL148C 765 nt11.97□□□□□ -0.49
TY4A-JP47023 YLR154C-GYLR154C-G 150 nt11.96□□□□□ -0.49
TY4A-JP47023 YPR011CYPR011C 981 nt11.93□□□□□ -0.5
TY4A-JP47023 SIS1YNL007C 1059 nt11.92□□□□□ -0.5
TY4A-JP47023 YLR236CYLR236C 324 nt11.88□□□□□ -0.51
TY4A-JP47023 SDH1YKL148C 1923 nt11.86□□□□□ -0.51
TY4A-JP47023 YDL221WYDL221W 552 nt11.86□□□□□ -0.51
TY4A-JP47023 DSK2YMR276W 1122 nt11.86□□□□□ -0.51
TY4A-JP47023 SEC11YIR022W 504 nt11.83□□□□□ -0.52
TY4A-JP47023 PCH2YBR186W 1695 nt11.82□□□□□ -0.52
TY4A-JP47023 PTP1YDL230W 1008 nt11.82□□□□□ -0.52
TY4A-JP47023 IMP2'YIL154C 1041 nt11.82□□□□□ -0.52
TY4A-JP47023 YCH1YGR203W 447 nt11.81□□□□□ -0.52
TY4A-JP47023 RPP2AYOL039W 321 nt11.79□□□□□ -0.52
TY4A-JP47023 TIR4YOR009W 1464 nt11.78□□□□□ -0.52
TY4A-JP47023 GUT2YIL155C 1950 nt11.78□□□□□ -0.52
TY4A-JP47023 FMP45YDL222C 930 nt11.75□□□□□ -0.53
TY4A-JP47023 YJL152WYJL152W 360 nt11.72□□□□□ -0.53
TY4A-JP47023 ART5YGR068C 1761 nt11.7□□□□□ -0.54
TY4A-JP47023 CAC2YML102W 1407 nt11.68□□□□□ -0.54
TY4A-JP47023 SCC4YER147C 1875 nt11.66□□□□□ -0.54
TY4A-JP47023 GFD2YCL036W 1701 nt11.66□□□□□ -0.54
TY4A-JP47023 ERV46YAL042W 1248 nt11.65□□□□□ -0.54
TY4A-JP47023 PET9YBL030C 957 nt11.64□□□□□ -0.55
TY4A-JP47023 LPX1YOR084W 1164 nt11.63□□□□□ -0.55
TY4A-JP47023 IDH1YNL037C 1083 nt11.62□□□□□ -0.55
TY4A-JP47023 YMR057CYMR057C 372 nt11.58□□□□□ -0.56
TY4A-JP47023 PIB2YGL023C 1908 nt11.55□□□□□ -0.56
TY4A-JP47023 IRC15YPL017C 1500 nt11.53□□□□□ -0.56
TY4A-JP47023 GBP2YCL011C 1284 nt11.52□□□□□ -0.57
TY4A-JP47023 UME6YDR207C 2511 nt11.51□□□□□ -0.57
TY4A-JP47023 YDR433WYDR433W 441 nt11.5□□□□□ -0.57
TY4A-JP47023 SPP1YPL138C 1062 nt11.5□□□□□ -0.57
TY4A-JP47023 YKR040CYKR040C 504 nt11.49□□□□□ -0.57
TY4A-JP47023 GIS3YLR094C 1509 nt11.48□□□□□ -0.57
TY4A-JP47023 MXR2YCL033C 507 nt11.46□□□□□ -0.57
TY4A-JP47023 RTF1YGL244W 1677 nt11.46□□□□□ -0.58
TY4A-JP47023 YCL048W-AYCL048W-A 240 nt11.45□□□□□ -0.58
TY4A-JP47023 YSC84YHR016C 1407 nt11.44□□□□□ -0.58
TY4A-JP47023 SSN3YPL042C 1668 nt11.44□□□□□ -0.58
TY4A-JP47023 MRPL8YJL063C 717 nt11.43□□□□□ -0.58
TY4A-JP47023 RTS2YOR077W 699 nt11.43□□□□□ -0.58
TY4A-JP47023 DED1YOR204W 1815 nt11.42□□□□□ -0.58
TY4A-JP47023 RRD1YIL153W 1182 nt11.39□□□□□ -0.59
TY4A-JP47023 RTG1YOL067C 534 nt11.38□□□□□ -0.59
TY4A-JP47023 BSP1YPR171W 1731 nt11.38□□□□□ -0.59
TY4A-JP47023 YHL050CYHL050C 2094 nt11.37□□□□□ -0.59
TY4A-JP47023 CUE1YMR264W 612 nt11.36□□□□□ -0.59
TY4A-JP47023 BOP3YNL042W 1191 nt11.36□□□□□ -0.59
TY4A-JP47023 TCD2YKL027W 1344 nt11.35□□□□□ -0.59
TY4A-JP47023 YEL076C-AYEL076C-A 651 nt11.31□□□□□ -0.6
TY4A-JP47023 YEL076CYEL076C 651 nt11.31□□□□□ -0.6
TY4A-JP47023 YLR464WYLR464W 651 nt11.31□□□□□ -0.6
TY4A-JP47023 FRD1YEL047C 1413 nt11.31□□□□□ -0.6
TY4A-JP47023 FMT1YBL013W 1206 nt11.29□□□□□ -0.6
TY4A-JP47023 PTK1YKL198C 1989 nt11.27□□□□□ -0.61
TY4A-JP47023 ADO1YJR105W 1023 nt11.24□□□□□ -0.61
TY4A-JP47023 SOR2YDL246C 1074 nt11.23□□□□□ -0.61
TY4A-JP47023 SOR1YJR159W 1074 nt11.23□□□□□ -0.61
TY4A-JP47023 YNL195CYNL195C 786 nt11.21□□□□□ -0.61
TY4A-JP47023 RRT12YCR045C 1476 nt11.2□□□□□ -0.62
TY4A-JP47023 BOR1YNL275W 1731 nt11.18□□□□□ -0.62
TY4A-JP47023 FMP52YER004W 696 nt11.16□□□□□ -0.62
TY4A-JP47023 YIL100WYIL100W 354 nt11.13□□□□□ -0.63
TY4A-JP47023 YCL042WYCL042W 360 nt11.12□□□□□ -0.63
TY4A-JP47023 PTH1YHR189W 573 nt11.07□□□□□ -0.64
TY4A-JP47023 UBX6YJL048C 1191 nt11.07□□□□□ -0.64
TY4A-JP47023 ADH2YMR303C 1047 nt11.07□□□□□ -0.64
TY4A-JP47023 HUA1YGR268C 597 nt11.05□□□□□ -0.64
TY4A-JP47023 CWP1YKL096W 720 nt11.05□□□□□ -0.64
TY4A-JP47023 NCP1YHR042W 2076 nt11.05□□□□□ -0.64
TY4A-JP47023 YLR235CYLR235C 399 nt11.03□□□□□ -0.64
TY4A-JP47023 YKL030WYKL030W 606 nt11.01□□□□□ -0.65
TY4A-JP47023 PCM1YEL058W 1674 nt11.01□□□□□ -0.65
TY4A-JP47023 YFL054CYFL054C 1941 nt10.99□□□□□ -0.65
TY4A-JP47023 SPT8YLR055C 1809 nt10.99□□□□□ -0.65
TY4A-JP47023 LCB1YMR296C 1677 nt10.98□□□□□ -0.65
TY4A-JP47023 GID7YCL039W 2238 nt10.93□□□□□ -0.66
TY4A-JP47023 SNF6YHL025W 999 nt10.92□□□□□ -0.66
TY4A-JP47023 YDR094WYDR094W 336 nt10.91□□□□□ -0.66
TY4A-JP47023 DIC1YLR348C 897 nt10.91□□□□□ -0.66
TY4A-JP47023 YIH1YCR059C 777 nt10.9□□□□□ -0.66
TY4A-JP47023 RNQ1YCL028W 1218 nt10.88□□□□□ -0.67
TY4A-JP47023 TIM23YNR017W 669 nt10.87□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms