Protein–RNA interactions for Protein: P38202

YBL028C, UPF0642 protein YBL028C, yeastyeast

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YBL028CP38202 SUF2tP(AGG)C 72 nt14.2□□□□□ -0.14
YBL028CP38202 SUF10tP(AGG)N 72 nt14.2□□□□□ -0.14
YBL028CP38202 ALF1YNL148C 765 nt14.19□□□□□ -0.14
YBL028CP38202 MRPL8YJL063C 717 nt14.1□□□□□ -0.15
YBL028CP38202 YPS1YLR120C 1710 nt14.09□□□□□ -0.15
YBL028CP38202 YDR095CYDR095C 411 nt14.08□□□□□ -0.16
YBL028CP38202 YJL152WYJL152W 360 nt14.08□□□□□ -0.16
YBL028CP38202 LPX1YOR084W 1164 nt14.02□□□□□ -0.17
YBL028CP38202 SIS1YNL007C 1059 nt14.01□□□□□ -0.17
YBL028CP38202 ERV46YAL042W 1248 nt14□□□□□ -0.17
YBL028CP38202 IDH1YNL037C 1083 nt13.97□□□□□ -0.17
YBL028CP38202 SPP1YPL138C 1062 nt13.94□□□□□ -0.18
YBL028CP38202 TIR4YOR009W 1464 nt13.89□□□□□ -0.19
YBL028CP38202 YHR165W-AYHR165W-A 312 nt13.89□□□□□ -0.19
YBL028CP38202 YDR433WYDR433W 441 nt13.88□□□□□ -0.19
YBL028CP38202 ADO1YJR105W 1023 nt13.88□□□□□ -0.19
YBL028CP38202 YKR040CYKR040C 504 nt13.87□□□□□ -0.19
YBL028CP38202 YEL076C-AYEL076C-A 651 nt13.85□□□□□ -0.19
YBL028CP38202 YEL076CYEL076C 651 nt13.85□□□□□ -0.19
YBL028CP38202 YLR464WYLR464W 651 nt13.85□□□□□ -0.19
YBL028CP38202 RTG1YOL067C 534 nt13.83□□□□□ -0.2
YBL028CP38202 RPP2AYOL039W 321 nt13.81□□□□□ -0.2
YBL028CP38202 GBP2YCL011C 1284 nt13.81□□□□□ -0.2
YBL028CP38202 MXR2YCL033C 507 nt13.75□□□□□ -0.21
YBL028CP38202 PTP1YDL230W 1008 nt13.74□□□□□ -0.21
YBL028CP38202 CAC2YML102W 1407 nt13.73□□□□□ -0.21
YBL028CP38202 ART5YGR068C 1761 nt13.73□□□□□ -0.21
YBL028CP38202 UBX6YJL048C 1191 nt13.72□□□□□ -0.21
YBL028CP38202 PET9YBL030C 957 nt13.71□□□□□ -0.21
YBL028CP38202 YMR057CYMR057C 372 nt13.7□□□□□ -0.22
YBL028CP38202 MEP2YNL142W 1500 nt13.67□□□□□ -0.22
YBL028CP38202 YCL048W-AYCL048W-A 240 nt13.63□□□□□ -0.23
YBL028CP38202 GFD2YCL036W 1701 nt13.63□□□□□ -0.23
YBL028CP38202 SPT5YML010W 3192 nt13.61□□□□□ -0.23
YBL028CP38202 TCD2YKL027W 1344 nt13.6□□□□□ -0.23
YBL028CP38202 HUA1YGR268C 597 nt13.54□□□□□ -0.24
YBL028CP38202 DED1YOR204W 1815 nt13.5□□□□□ -0.25
YBL028CP38202 FRD1YEL047C 1413 nt13.48□□□□□ -0.25
YBL028CP38202 DCW1YKL046C 1350 nt13.47□□□□□ -0.25
YBL028CP38202 RRD1YIL153W 1182 nt13.47□□□□□ -0.25
YBL028CP38202 FPS1YLL043W 2010 nt13.46□□□□□ -0.26
YBL028CP38202 YDR094WYDR094W 336 nt13.43□□□□□ -0.26
YBL028CP38202 RTS2YOR077W 699 nt13.38□□□□□ -0.27
YBL028CP38202 FMT1YBL013W 1206 nt13.36□□□□□ -0.27
YBL028CP38202 PTH1YHR189W 573 nt13.34□□□□□ -0.27
YBL028CP38202 YCL042WYCL042W 360 nt13.33□□□□□ -0.28
YBL028CP38202 EMI2YDR516C 1503 nt13.33□□□□□ -0.28
YBL028CP38202 IRC15YPL017C 1500 nt13.33□□□□□ -0.28
YBL028CP38202 SOR2YDL246C 1074 nt13.32□□□□□ -0.28
YBL028CP38202 SOR1YJR159W 1074 nt13.32□□□□□ -0.28
YBL028CP38202 YKL030WYKL030W 606 nt13.31□□□□□ -0.28
YBL028CP38202 YLR235CYLR235C 399 nt13.3□□□□□ -0.28
YBL028CP38202 CUE1YMR264W 612 nt13.3□□□□□ -0.28
YBL028CP38202 YFL015W-AYFL015W-A 318 nt13.28□□□□□ -0.28
YBL028CP38202 YDL221WYDL221W 552 nt13.26□□□□□ -0.29
YBL028CP38202 LCB1YMR296C 1677 nt13.21□□□□□ -0.29
YBL028CP38202 GIS3YLR094C 1509 nt13.2□□□□□ -0.3
YBL028CP38202 FMP52YER004W 696 nt13.19□□□□□ -0.3
YBL028CP38202 YMR090WYMR090W 684 nt13.17□□□□□ -0.3
YBL028CP38202 CWP1YKL096W 720 nt13.14□□□□□ -0.31
YBL028CP38202 ADH2YMR303C 1047 nt13.11□□□□□ -0.31
YBL028CP38202 YIL100WYIL100W 354 nt13.1□□□□□ -0.31
YBL028CP38202 TIM23YNR017W 669 nt13.04□□□□□ -0.32
YBL028CP38202 SCC4YER147C 1875 nt13.01□□□□□ -0.33
YBL028CP38202 SDH1YKL148C 1923 nt13.01□□□□□ -0.33
YBL028CP38202 DIC1YLR348C 897 nt13□□□□□ -0.33
YBL028CP38202 YFR018CYFR018C 1092 nt12.99□□□□□ -0.33
YBL028CP38202 tL(GAG)GtL(GAG)G 82 nt12.99□□□□□ -0.33
YBL028CP38202 PCM1YEL058W 1674 nt12.98□□□□□ -0.33
YBL028CP38202 PAU16YKL224C 372 nt12.97□□□□□ -0.33
YBL028CP38202 SNF6YHL025W 999 nt12.95□□□□□ -0.34
YBL028CP38202 YLR179CYLR179C 606 nt12.93□□□□□ -0.34
YBL028CP38202 YBR220CYBR220C 1683 nt12.92□□□□□ -0.34
YBL028CP38202 RNQ1YCL028W 1218 nt12.9□□□□□ -0.34
YBL028CP38202 RRT5YFR032C 870 nt12.89□□□□□ -0.35
YBL028CP38202 PRE6YOL038W 765 nt12.89□□□□□ -0.35
YBL028CP38202 YPR064WYPR064W 420 nt12.89□□□□□ -0.35
YBL028CP38202 YIH1YCR059C 777 nt12.88□□□□□ -0.35
YBL028CP38202 SSA4YER103W 1929 nt12.87□□□□□ -0.35
YBL028CP38202 SBA1YKL117W 651 nt12.86□□□□□ -0.35
YBL028CP38202 TAD3YLR316C 969 nt12.86□□□□□ -0.35
YBL028CP38202 WSC2YNL283C 1512 nt12.84□□□□□ -0.35
YBL028CP38202 AHT1YHR093W 549 nt12.84□□□□□ -0.35
YBL028CP38202 YNL195CYNL195C 786 nt12.77□□□□□ -0.37
YBL028CP38202 YLL053CYLL053C 459 nt12.73□□□□□ -0.37
YBL028CP38202 YFL066CYFL066C 1179 nt12.72□□□□□ -0.37
YBL028CP38202 RRT12YCR045C 1476 nt12.72□□□□□ -0.37
YBL028CP38202 FTR1YER145C 1215 nt12.67□□□□□ -0.38
YBL028CP38202 BIO4YNR057C 714 nt12.67□□□□□ -0.38
YBL028CP38202 PEX25YPL112C 1185 nt12.67□□□□□ -0.38
YBL028CP38202 AQY1YPR192W 918 nt12.67□□□□□ -0.38
YBL028CP38202 YSC84YHR016C 1407 nt12.66□□□□□ -0.38
YBL028CP38202 BDH1YAL060W 1149 nt12.65□□□□□ -0.38
YBL028CP38202 YSP3YOR003W 1437 nt12.64□□□□□ -0.39
YBL028CP38202 GAL1YBR020W 1587 nt12.63□□□□□ -0.39
YBL028CP38202 SIM1YIL123W 1431 nt12.62□□□□□ -0.39
YBL028CP38202 YHL050CYHL050C 2094 nt12.58□□□□□ -0.4
YBL028CP38202 YNL115CYNL115C 1935 nt12.58□□□□□ -0.4
YBL028CP38202 TRM5YHR070W 1500 nt12.57□□□□□ -0.4
YBL028CP38202 NAT4YMR069W 858 nt12.56□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms