Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 SUF2tP(AGG)C 72 nt16.33■□□□□ 0.2
RTG3P38165 SUF10tP(AGG)N 72 nt16.33■□□□□ 0.2
RTG3P38165 YLR154C-GYLR154C-G 150 nt16.31■□□□□ 0.2
RTG3P38165 MEP2YNL142W 1500 nt16.28■□□□□ 0.2
RTG3P38165 SIS1YNL007C 1059 nt16.27■□□□□ 0.2
RTG3P38165 NME1NME1 340 nt16.25■□□□□ 0.19
RTG3P38165 YPR011CYPR011C 981 nt16.24■□□□□ 0.19
RTG3P38165 PTP1YDL230W 1008 nt16.19■□□□□ 0.18
RTG3P38165 RPP2AYOL039W 321 nt16.16■□□□□ 0.18
RTG3P38165 YLR236CYLR236C 324 nt16.14■□□□□ 0.17
RTG3P38165 YJL152WYJL152W 360 nt16.13■□□□□ 0.17
RTG3P38165 TIR4YOR009W 1464 nt16.12■□□□□ 0.17
RTG3P38165 DCW1YKL046C 1350 nt16.12■□□□□ 0.17
RTG3P38165 YCH1YGR203W 447 nt16.11■□□□□ 0.17
RTG3P38165 DSK2YMR276W 1122 nt16.08■□□□□ 0.16
RTG3P38165 ART5YGR068C 1761 nt16.06■□□□□ 0.16
RTG3P38165 CAC2YML102W 1407 nt16.04■□□□□ 0.16
RTG3P38165 FMP45YDL222C 930 nt16■□□□□ 0.15
RTG3P38165 GFD2YCL036W 1701 nt15.97■□□□□ 0.15
RTG3P38165 IMP2'YIL154C 1041 nt15.95■□□□□ 0.14
RTG3P38165 YMR057CYMR057C 372 nt15.93■□□□□ 0.14
RTG3P38165 PET9YBL030C 957 nt15.9■□□□□ 0.14
RTG3P38165 EMI2YDR516C 1503 nt15.85■□□□□ 0.13
RTG3P38165 LPX1YOR084W 1164 nt15.85■□□□□ 0.13
RTG3P38165 IDH1YNL037C 1083 nt15.84■□□□□ 0.13
RTG3P38165 RTS2YOR077W 699 nt15.79■□□□□ 0.12
RTG3P38165 IRC15YPL017C 1500 nt15.78■□□□□ 0.12
RTG3P38165 SSA4YER103W 1929 nt15.76■□□□□ 0.11
RTG3P38165 ERV46YAL042W 1248 nt15.75■□□□□ 0.11
RTG3P38165 GBP2YCL011C 1284 nt15.75■□□□□ 0.11
RTG3P38165 YDL221WYDL221W 552 nt15.74■□□□□ 0.11
RTG3P38165 YDR433WYDR433W 441 nt15.74■□□□□ 0.11
RTG3P38165 MXR2YCL033C 507 nt15.71■□□□□ 0.11
RTG3P38165 FPS1YLL043W 2010 nt15.7■□□□□ 0.1
RTG3P38165 SPP1YPL138C 1062 nt15.69■□□□□ 0.1
RTG3P38165 YCL048W-AYCL048W-A 240 nt15.69■□□□□ 0.1
RTG3P38165 CSM2YIL132C 642 nt15.68■□□□□ 0.1
RTG3P38165 GIS3YLR094C 1509 nt15.63■□□□□ 0.09
RTG3P38165 YKR040CYKR040C 504 nt15.61■□□□□ 0.09
RTG3P38165 YMR090WYMR090W 684 nt15.59■□□□□ 0.09
RTG3P38165 CUE1YMR264W 612 nt15.56■□□□□ 0.08
RTG3P38165 DED1YOR204W 1815 nt15.56■□□□□ 0.08
RTG3P38165 RRD1YIL153W 1182 nt15.54■□□□□ 0.08
RTG3P38165 YBR220CYBR220C 1683 nt15.51■□□□□ 0.07
RTG3P38165 SDH1YKL148C 1923 nt15.51■□□□□ 0.07
RTG3P38165 TCD2YKL027W 1344 nt15.51■□□□□ 0.07
RTG3P38165 SCC4YER147C 1875 nt15.46■□□□□ 0.06
RTG3P38165 FMT1YBL013W 1206 nt15.43■□□□□ 0.06
RTG3P38165 PAU21YOR394W 495 nt15.43■□□□□ 0.06
RTG3P38165 PAU22YPL282C 495 nt15.43■□□□□ 0.06
RTG3P38165 FRD1YEL047C 1413 nt15.38■□□□□ 0.05
RTG3P38165 RTG1YOL067C 534 nt15.36■□□□□ 0.05
RTG3P38165 YIL100WYIL100W 354 nt15.31■□□□□ 0.04
RTG3P38165 MRPL8YJL063C 717 nt15.28■□□□□ 0.04
RTG3P38165 ARO7YPR060C 771 nt15.28■□□□□ 0.04
RTG3P38165 SOR2YDL246C 1074 nt15.23■□□□□ 0.03
RTG3P38165 YEL076C-AYEL076C-A 651 nt15.23■□□□□ 0.03
RTG3P38165 YEL076CYEL076C 651 nt15.23■□□□□ 0.03
RTG3P38165 SOR1YJR159W 1074 nt15.23■□□□□ 0.03
RTG3P38165 YLR464WYLR464W 651 nt15.23■□□□□ 0.03
RTG3P38165 YCL042WYCL042W 360 nt15.19■□□□□ 0.02
RTG3P38165 PTH1YHR189W 573 nt15.18■□□□□ 0.02
RTG3P38165 CWP1YKL096W 720 nt15.18■□□□□ 0.02
RTG3P38165 ADH2YMR303C 1047 nt15.17■□□□□ 0.02
RTG3P38165 FMP52YER004W 696 nt15.16■□□□□ 0.02
RTG3P38165 RRT12YCR045C 1476 nt15.15■□□□□ 0.02
RTG3P38165 BDF1YLR399C 2061 nt15.14■□□□□ 0.01
RTG3P38165 ADO1YJR105W 1023 nt15.1■□□□□ 0.01
RTG3P38165 YSC84YHR016C 1407 nt15.08■□□□□ 0
RTG3P38165 PCM1YEL058W 1674 nt15.06■□□□□ 0
RTG3P38165 PAM17YKR065C 594 nt15.05■□□□□ -0
RTG3P38165 YHL050CYHL050C 2094 nt15.05■□□□□ -0
RTG3P38165 YNL195CYNL195C 786 nt15.01□□□□□ -0.01
RTG3P38165 YLR235CYLR235C 399 nt14.97□□□□□ -0.01
RTG3P38165 LCB1YMR296C 1677 nt14.97□□□□□ -0.01
RTG3P38165 YKL030WYKL030W 606 nt14.96□□□□□ -0.01
RTG3P38165 SNF6YHL025W 999 nt14.95□□□□□ -0.02
RTG3P38165 HUA1YGR268C 597 nt14.94□□□□□ -0.02
RTG3P38165 TAT1YBR069C 1860 nt14.93□□□□□ -0.02
RTG3P38165 REG2YBR050C 1017 nt14.92□□□□□ -0.02
RTG3P38165 UBX6YJL048C 1191 nt14.9□□□□□ -0.02
RTG3P38165 DIC1YLR348C 897 nt14.89□□□□□ -0.03
RTG3P38165 YIH1YCR059C 777 nt14.84□□□□□ -0.03
RTG3P38165 RNQ1YCL028W 1218 nt14.83□□□□□ -0.04
RTG3P38165 TIM23YNR017W 669 nt14.82□□□□□ -0.04
RTG3P38165 SEC11YIR022W 504 nt14.79□□□□□ -0.04
RTG3P38165 BIO4YNR057C 714 nt14.78□□□□□ -0.04
RTG3P38165 PCH2YBR186W 1695 nt14.76□□□□□ -0.05
RTG3P38165 SIM1YIL123W 1431 nt14.75□□□□□ -0.05
RTG3P38165 YLL053CYLL053C 459 nt14.74□□□□□ -0.05
RTG3P38165 YLR179CYLR179C 606 nt14.73□□□□□ -0.05
RTG3P38165 YDR509WYDR509W 348 nt14.72□□□□□ -0.05
RTG3P38165 VAR1Q0140 1197 nt14.71□□□□□ -0.05
RTG3P38165 GUT2YIL155C 1950 nt14.68□□□□□ -0.06
RTG3P38165 YDR094WYDR094W 336 nt14.68□□□□□ -0.06
RTG3P38165 WSC2YNL283C 1512 nt14.66□□□□□ -0.06
RTG3P38165 NCP1YHR042W 2076 nt14.64□□□□□ -0.07
RTG3P38165 FTR1YER145C 1215 nt14.62□□□□□ -0.07
RTG3P38165 BUR6YER159C 429 nt14.62□□□□□ -0.07
RTG3P38165 AHT1YHR093W 549 nt14.6□□□□□ -0.07
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms