Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 SEC11YIR022W 504 nt12.27□□□□□ -0.45
DEF1P35732 PIB2YGL023C 1908 nt12.27□□□□□ -0.45
DEF1P35732 CCT6YDR188W 1641 nt12.22□□□□□ -0.45
DEF1P35732 RDN37-1RDN37-1 5354 nt12.21□□□□□ -0.46
DEF1P35732 RDN37-2RDN37-2 5354 nt12.21□□□□□ -0.46
DEF1P35732 YPS1YLR120C 1710 nt12.2□□□□□ -0.46
DEF1P35732 DCW1YKL046C 1350 nt12.17□□□□□ -0.46
DEF1P35732 Q0182Q0182 405 nt12.16□□□□□ -0.46
DEF1P35732 YDR095CYDR095C 411 nt12.15□□□□□ -0.46
DEF1P35732 YMR090WYMR090W 684 nt12.12□□□□□ -0.47
DEF1P35732 ALF1YNL148C 765 nt12.11□□□□□ -0.47
DEF1P35732 tM(CAU)CtM(CAU)C 72 nt12.1□□□□□ -0.47
DEF1P35732 IMT4tM(CAU)E 72 nt12.1□□□□□ -0.47
DEF1P35732 IMT3tM(CAU)J3 72 nt12.1□□□□□ -0.47
DEF1P35732 IMT1tM(CAU)O1 72 nt12.1□□□□□ -0.47
DEF1P35732 IMT2tM(CAU)P 72 nt12.1□□□□□ -0.47
DEF1P35732 SUF2tP(AGG)C 72 nt12.09□□□□□ -0.47
DEF1P35732 SUF10tP(AGG)N 72 nt12.09□□□□□ -0.47
DEF1P35732 YLR281CYLR281C 468 nt12.09□□□□□ -0.47
DEF1P35732 WHI5YOR083W 888 nt12.03□□□□□ -0.48
DEF1P35732 YHR165W-AYHR165W-A 312 nt12.02□□□□□ -0.49
DEF1P35732 HSL7YBR133C 2484 nt12.02□□□□□ -0.49
DEF1P35732 EMI2YDR516C 1503 nt12.01□□□□□ -0.49
DEF1P35732 DED1YOR204W 1815 nt11.99□□□□□ -0.49
DEF1P35732 SIS1YNL007C 1059 nt11.98□□□□□ -0.49
DEF1P35732 PUS2YGL063W 1113 nt11.97□□□□□ -0.49
DEF1P35732 SSN3YPL042C 1668 nt11.97□□□□□ -0.49
DEF1P35732 RTF1YGL244W 1677 nt11.95□□□□□ -0.5
DEF1P35732 YLR154C-GYLR154C-G 150 nt11.95□□□□□ -0.5
DEF1P35732 SDH1YKL148C 1923 nt11.94□□□□□ -0.5
DEF1P35732 RDN25-1RDN25-1 3396 nt11.91□□□□□ -0.5
DEF1P35732 RDN25-2RDN25-2 3396 nt11.91□□□□□ -0.5
DEF1P35732 RPP2AYOL039W 321 nt11.91□□□□□ -0.5
DEF1P35732 HEL2YDR266C 1920 nt11.88□□□□□ -0.51
DEF1P35732 PTP1YDL230W 1008 nt11.87□□□□□ -0.51
DEF1P35732 NAR1YNL240C 1476 nt11.86□□□□□ -0.51
DEF1P35732 GID7YCL039W 2238 nt11.86□□□□□ -0.51
DEF1P35732 HSP60YLR259C 1719 nt11.83□□□□□ -0.52
DEF1P35732 YDL221WYDL221W 552 nt11.83□□□□□ -0.52
DEF1P35732 MET2YNL277W 1461 nt11.82□□□□□ -0.52
DEF1P35732 YAT1YAR035W 2064 nt11.82□□□□□ -0.52
DEF1P35732 PTK1YKL198C 1989 nt11.81□□□□□ -0.52
DEF1P35732 IMP2'YIL154C 1041 nt11.8□□□□□ -0.52
DEF1P35732 DSK2YMR276W 1122 nt11.79□□□□□ -0.52
DEF1P35732 SFP1YLR403W 2052 nt11.79□□□□□ -0.52
DEF1P35732 TIR4YOR009W 1464 nt11.78□□□□□ -0.52
DEF1P35732 CMP2YML057W 1815 nt11.78□□□□□ -0.52
DEF1P35732 YJL152WYJL152W 360 nt11.77□□□□□ -0.53
DEF1P35732 LCB1YMR296C 1677 nt11.77□□□□□ -0.53
DEF1P35732 YCH1YGR203W 447 nt11.76□□□□□ -0.53
DEF1P35732 NPP1YCR026C 2229 nt11.76□□□□□ -0.53
DEF1P35732 ART5YGR068C 1761 nt11.75□□□□□ -0.53
DEF1P35732 YPR011CYPR011C 981 nt11.75□□□□□ -0.53
DEF1P35732 YHL050CYHL050C 2094 nt11.74□□□□□ -0.53
DEF1P35732 YLR236CYLR236C 324 nt11.74□□□□□ -0.53
DEF1P35732 SPT8YLR055C 1809 nt11.74□□□□□ -0.53
DEF1P35732 CAC2YML102W 1407 nt11.73□□□□□ -0.53
DEF1P35732 PET9YBL030C 957 nt11.73□□□□□ -0.53
DEF1P35732 GFD2YCL036W 1701 nt11.71□□□□□ -0.54
DEF1P35732 BOP3YNL042W 1191 nt11.67□□□□□ -0.54
DEF1P35732 FMP45YDL222C 930 nt11.66□□□□□ -0.54
DEF1P35732 IDH1YNL037C 1083 nt11.65□□□□□ -0.54
DEF1P35732 SCC4YER147C 1875 nt11.65□□□□□ -0.54
DEF1P35732 FRE6YLL051C 2139 nt11.64□□□□□ -0.55
DEF1P35732 MOT3YMR070W 1473 nt11.63□□□□□ -0.55
DEF1P35732 YMR057CYMR057C 372 nt11.63□□□□□ -0.55
DEF1P35732 IRC15YPL017C 1500 nt11.56□□□□□ -0.56
DEF1P35732 ERV46YAL042W 1248 nt11.56□□□□□ -0.56
DEF1P35732 YSC84YHR016C 1407 nt11.53□□□□□ -0.56
DEF1P35732 GBP2YCL011C 1284 nt11.53□□□□□ -0.56
DEF1P35732 YCL048W-AYCL048W-A 240 nt11.53□□□□□ -0.56
DEF1P35732 ESBP6YNL125C 2022 nt11.52□□□□□ -0.56
DEF1P35732 LPX1YOR084W 1164 nt11.52□□□□□ -0.57
DEF1P35732 RTS2YOR077W 699 nt11.5□□□□□ -0.57
DEF1P35732 YDR433WYDR433W 441 nt11.48□□□□□ -0.57
DEF1P35732 GIS3YLR094C 1509 nt11.46□□□□□ -0.57
DEF1P35732 CUE1YMR264W 612 nt11.46□□□□□ -0.57
DEF1P35732 HMG2YLR450W 3138 nt11.44□□□□□ -0.58
DEF1P35732 YKR040CYKR040C 504 nt11.44□□□□□ -0.58
DEF1P35732 GLK1YCL040W 1503 nt11.44□□□□□ -0.58
DEF1P35732 BSP1YPR171W 1731 nt11.41□□□□□ -0.58
DEF1P35732 YFL054CYFL054C 1941 nt11.41□□□□□ -0.58
DEF1P35732 ILV2YMR108W 2064 nt11.4□□□□□ -0.58
DEF1P35732 TCD2YKL027W 1344 nt11.39□□□□□ -0.59
DEF1P35732 MXR2YCL033C 507 nt11.39□□□□□ -0.59
DEF1P35732 TPO4YOR273C 1980 nt11.38□□□□□ -0.59
DEF1P35732 CYT2YKL087C 675 nt11.38□□□□□ -0.59
DEF1P35732 RRD1YIL153W 1182 nt11.37□□□□□ -0.59
DEF1P35732 PBP1YGR178C 2169 nt11.36□□□□□ -0.59
DEF1P35732 MAE1YKL029C 2010 nt11.33□□□□□ -0.6
DEF1P35732 SPP1YPL138C 1062 nt11.33□□□□□ -0.6
DEF1P35732 UBX6YJL048C 1191 nt11.31□□□□□ -0.6
DEF1P35732 RFC1YOR217W 2586 nt11.29□□□□□ -0.6
DEF1P35732 UGA4YDL210W 1716 nt11.29□□□□□ -0.6
DEF1P35732 DTR1YBR180W 1719 nt11.29□□□□□ -0.6
DEF1P35732 YIL100WYIL100W 354 nt11.28□□□□□ -0.6
DEF1P35732 AAC1YMR056C 930 nt11.26□□□□□ -0.61
DEF1P35732 GTB1YDR221W 2109 nt11.26□□□□□ -0.61
DEF1P35732 MRPL8YJL063C 717 nt11.25□□□□□ -0.61
DEF1P35732 FMT1YBL013W 1206 nt11.24□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms