Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 ADO1YJR105W 1023 nt20.18■□□□□ 0.82
UFD4P33202 NAB2YGL122C 1578 nt20.14■□□□□ 0.81
UFD4P33202 INM2YDR287W 879 nt20.12■□□□□ 0.81
UFD4P33202 RTG1YOL067C 534 nt20.1■□□□□ 0.81
UFD4P33202 DAL1YIR027C 1383 nt20.09■□□□□ 0.81
UFD4P33202 TRM9YML014W 840 nt20.09■□□□□ 0.81
UFD4P33202 FUN26YAL022C 1554 nt20.07■□□□□ 0.8
UFD4P33202 PHO4YFR034C 939 nt20.05■□□□□ 0.8
UFD4P33202 ERV46YAL042W 1248 nt19.95■□□□□ 0.78
UFD4P33202 CCT6YDR188W 1641 nt19.9■□□□□ 0.78
UFD4P33202 YJL152WYJL152W 360 nt19.88■□□□□ 0.77
UFD4P33202 SIS1YNL007C 1059 nt19.8■□□□□ 0.76
UFD4P33202 YDR433WYDR433W 441 nt19.77■□□□□ 0.76
UFD4P33202 IDH1YNL037C 1083 nt19.75■□□□□ 0.75
UFD4P33202 YFL015W-AYFL015W-A 318 nt19.7■□□□□ 0.74
UFD4P33202 MXR2YCL033C 507 nt19.67■□□□□ 0.74
UFD4P33202 YDR094WYDR094W 336 nt19.67■□□□□ 0.74
UFD4P33202 SUF2tP(AGG)C 72 nt19.6■□□□□ 0.73
UFD4P33202 SUF10tP(AGG)N 72 nt19.6■□□□□ 0.73
UFD4P33202 YKR040CYKR040C 504 nt19.59■□□□□ 0.73
UFD4P33202 ALF1YNL148C 765 nt19.58■□□□□ 0.72
UFD4P33202 HUA1YGR268C 597 nt19.54■□□□□ 0.72
UFD4P33202 GBP2YCL011C 1284 nt19.5■□□□□ 0.71
UFD4P33202 TIR4YOR009W 1464 nt19.46■□□□□ 0.71
UFD4P33202 YPS1YLR120C 1710 nt19.4■□□□□ 0.7
UFD4P33202 SBA1YKL117W 651 nt19.31■□□□□ 0.68
UFD4P33202 YDR095CYDR095C 411 nt19.29■□□□□ 0.68
UFD4P33202 PTH1YHR189W 573 nt19.22■□□□□ 0.67
UFD4P33202 TCD2YKL027W 1344 nt19.1■□□□□ 0.65
UFD4P33202 FRD1YEL047C 1413 nt19.1■□□□□ 0.65
UFD4P33202 YCL048W-AYCL048W-A 240 nt19.09■□□□□ 0.65
UFD4P33202 PAU16YKL224C 372 nt19.07■□□□□ 0.64
UFD4P33202 CAC2YML102W 1407 nt19.04■□□□□ 0.64
UFD4P33202 YMR057CYMR057C 372 nt19.03■□□□□ 0.64
UFD4P33202 YHR165W-AYHR165W-A 312 nt19.01■□□□□ 0.63
UFD4P33202 ART5YGR068C 1761 nt18.98■□□□□ 0.63
UFD4P33202 DED1YOR204W 1815 nt18.96■□□□□ 0.63
UFD4P33202 YKL030WYKL030W 606 nt18.93■□□□□ 0.62
UFD4P33202 LCB1YMR296C 1677 nt18.86■□□□□ 0.61
UFD4P33202 RPP2AYOL039W 321 nt18.86■□□□□ 0.61
UFD4P33202 PRE6YOL038W 765 nt18.85■□□□□ 0.61
UFD4P33202 GFD2YCL036W 1701 nt18.85■□□□□ 0.61
UFD4P33202 RRD1YIL153W 1182 nt18.83■□□□□ 0.6
UFD4P33202 YLR235CYLR235C 399 nt18.83■□□□□ 0.6
UFD4P33202 YCL042WYCL042W 360 nt18.77■□□□□ 0.59
UFD4P33202 PTP1YDL230W 1008 nt18.76■□□□□ 0.59
UFD4P33202 PET9YBL030C 957 nt18.76■□□□□ 0.59
UFD4P33202 SOR2YDL246C 1074 nt18.72■□□□□ 0.59
UFD4P33202 SOR1YJR159W 1074 nt18.72■□□□□ 0.59
UFD4P33202 YFR018CYFR018C 1092 nt18.7■□□□□ 0.58
UFD4P33202 FMT1YBL013W 1206 nt18.7■□□□□ 0.58
UFD4P33202 RTS2YOR077W 699 nt18.67■□□□□ 0.58
UFD4P33202 RRT5YFR032C 870 nt18.63■□□□□ 0.57
UFD4P33202 FPS1YLL043W 2010 nt18.61■□□□□ 0.57
UFD4P33202 tL(GAG)GtL(GAG)G 82 nt18.57■□□□□ 0.56
UFD4P33202 SPT5YML010W 3192 nt18.55■□□□□ 0.56
UFD4P33202 SNF6YHL025W 999 nt18.52■□□□□ 0.55
UFD4P33202 DIC1YLR348C 897 nt18.46■□□□□ 0.55
UFD4P33202 TIM23YNR017W 669 nt18.46■□□□□ 0.54
UFD4P33202 CWP1YKL096W 720 nt18.42■□□□□ 0.54
UFD4P33202 MEP2YNL142W 1500 nt18.38■□□□□ 0.53
UFD4P33202 ADH2YMR303C 1047 nt18.33■□□□□ 0.53
UFD4P33202 DCW1YKL046C 1350 nt18.32■□□□□ 0.52
UFD4P33202 YLR179CYLR179C 606 nt18.32■□□□□ 0.52
UFD4P33202 YFL066CYFL066C 1179 nt18.26■□□□□ 0.51
UFD4P33202 FMP52YER004W 696 nt18.24■□□□□ 0.51
UFD4P33202 CUE1YMR264W 612 nt18.22■□□□□ 0.51
UFD4P33202 YPR064WYPR064W 420 nt18.2■□□□□ 0.5
UFD4P33202 NAT4YMR069W 858 nt18.19■□□□□ 0.5
UFD4P33202 IRC15YPL017C 1500 nt18.18■□□□□ 0.5
UFD4P33202 PEX25YPL112C 1185 nt18.16■□□□□ 0.5
UFD4P33202 WSC2YNL283C 1512 nt18.15■□□□□ 0.5
UFD4P33202 TAD3YLR316C 969 nt18.12■□□□□ 0.49
UFD4P33202 SSA4YER103W 1929 nt18.09■□□□□ 0.49
UFD4P33202 GLK1YCL040W 1503 nt18.02■□□□□ 0.47
UFD4P33202 EMI2YDR516C 1503 nt18■□□□□ 0.47
UFD4P33202 MSF1YPR047W 1410 nt17.97■□□□□ 0.47
UFD4P33202 YIL100WYIL100W 354 nt17.97■□□□□ 0.47
UFD4P33202 YMR244WYMR244W 1068 nt17.97■□□□□ 0.47
UFD4P33202 AHT1YHR093W 549 nt17.96■□□□□ 0.47
UFD4P33202 GIS3YLR094C 1509 nt17.96■□□□□ 0.47
UFD4P33202 YNL115CYNL115C 1935 nt17.94■□□□□ 0.46
UFD4P33202 PCM1YEL058W 1674 nt17.94■□□□□ 0.46
UFD4P33202 YDL221WYDL221W 552 nt17.93■□□□□ 0.46
UFD4P33202 YSP3YOR003W 1437 nt17.88■□□□□ 0.45
UFD4P33202 RNQ1YCL028W 1218 nt17.88■□□□□ 0.45
UFD4P33202 YIH1YCR059C 777 nt17.87■□□□□ 0.45
UFD4P33202 MIR1YJR077C 936 nt17.87■□□□□ 0.45
UFD4P33202 BDH1YAL060W 1149 nt17.84■□□□□ 0.45
UFD4P33202 THI74YDR438W 1113 nt17.82■□□□□ 0.44
UFD4P33202 YSC84YHR016C 1407 nt17.75■□□□□ 0.43
UFD4P33202 GLR1YPL091W 1452 nt17.72■□□□□ 0.43
UFD4P33202 YLR415CYLR415C 339 nt17.72■□□□□ 0.43
UFD4P33202 YLL053CYLL053C 459 nt17.69■□□□□ 0.42
UFD4P33202 RBG2YGR173W 1107 nt17.63■□□□□ 0.41
UFD4P33202 FTR1YER145C 1215 nt17.62■□□□□ 0.41
UFD4P33202 DAT1YML113W 747 nt17.58■□□□□ 0.41
UFD4P33202 AQY1YPR192W 918 nt17.58■□□□□ 0.41
UFD4P33202 GAL1YBR020W 1587 nt17.58■□□□□ 0.4
UFD4P33202 BIO4YNR057C 714 nt17.57■□□□□ 0.4
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms