Protein–RNA interactions for Protein: P18480

SNF5, SWI/SNF chromatin-remodeling complex subunit SNF5, yeastyeast

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF5P18480 PHO4YFR034C 939 nt11.89□□□□□ -0.51
SNF5P18480 CCT6YDR188W 1641 nt11.89□□□□□ -0.51
SNF5P18480 ADO1YJR105W 1023 nt11.81□□□□□ -0.52
SNF5P18480 ERV46YAL042W 1248 nt11.76□□□□□ -0.53
SNF5P18480 YEL076C-AYEL076C-A 651 nt11.75□□□□□ -0.53
SNF5P18480 YEL076CYEL076C 651 nt11.75□□□□□ -0.53
SNF5P18480 YLR464WYLR464W 651 nt11.75□□□□□ -0.53
SNF5P18480 LPX1YOR084W 1164 nt11.73□□□□□ -0.53
SNF5P18480 SUF2tP(AGG)C 72 nt11.72□□□□□ -0.53
SNF5P18480 SUF10tP(AGG)N 72 nt11.72□□□□□ -0.53
SNF5P18480 UBX6YJL048C 1191 nt11.72□□□□□ -0.53
SNF5P18480 RTG1YOL067C 534 nt11.71□□□□□ -0.53
SNF5P18480 SPP1YPL138C 1062 nt11.69□□□□□ -0.54
SNF5P18480 SIS1YNL007C 1059 nt11.66□□□□□ -0.54
SNF5P18480 ALF1YNL148C 765 nt11.64□□□□□ -0.55
SNF5P18480 YJL152WYJL152W 360 nt11.63□□□□□ -0.55
SNF5P18480 IDH1YNL037C 1083 nt11.62□□□□□ -0.55
SNF5P18480 YKR040CYKR040C 504 nt11.6□□□□□ -0.55
SNF5P18480 SPT5YML010W 3192 nt11.57□□□□□ -0.56
SNF5P18480 YDR095CYDR095C 411 nt11.54□□□□□ -0.56
SNF5P18480 YDR433WYDR433W 441 nt11.54□□□□□ -0.56
SNF5P18480 YPS1YLR120C 1710 nt11.53□□□□□ -0.56
SNF5P18480 SSA4YER103W 1929 nt11.49□□□□□ -0.57
SNF5P18480 GBP2YCL011C 1284 nt11.46□□□□□ -0.57
SNF5P18480 TIR4YOR009W 1464 nt11.45□□□□□ -0.58
SNF5P18480 YDR094WYDR094W 336 nt11.45□□□□□ -0.58
SNF5P18480 HUA1YGR268C 597 nt11.43□□□□□ -0.58
SNF5P18480 MXR2YCL033C 507 nt11.43□□□□□ -0.58
SNF5P18480 YFL015W-AYFL015W-A 318 nt11.38□□□□□ -0.59
SNF5P18480 CAC2YML102W 1407 nt11.35□□□□□ -0.59
SNF5P18480 YHR165W-AYHR165W-A 312 nt11.32□□□□□ -0.6
SNF5P18480 RPP2AYOL039W 321 nt11.32□□□□□ -0.6
SNF5P18480 PET9YBL030C 957 nt11.29□□□□□ -0.6
SNF5P18480 TCD2YKL027W 1344 nt11.27□□□□□ -0.61
SNF5P18480 ART5YGR068C 1761 nt11.26□□□□□ -0.61
SNF5P18480 YMR057CYMR057C 372 nt11.26□□□□□ -0.61
SNF5P18480 PTP1YDL230W 1008 nt11.25□□□□□ -0.61
SNF5P18480 FRD1YEL047C 1413 nt11.25□□□□□ -0.61
SNF5P18480 YCL048W-AYCL048W-A 240 nt11.24□□□□□ -0.61
SNF5P18480 DED1YOR204W 1815 nt11.2□□□□□ -0.62
SNF5P18480 BDF1YLR399C 2061 nt11.19□□□□□ -0.62
SNF5P18480 GFD2YCL036W 1701 nt11.18□□□□□ -0.62
SNF5P18480 RRD1YIL153W 1182 nt11.15□□□□□ -0.62
SNF5P18480 YKL030WYKL030W 606 nt11.15□□□□□ -0.62
SNF5P18480 YLR235CYLR235C 399 nt11.11□□□□□ -0.63
SNF5P18480 PTH1YHR189W 573 nt11.1□□□□□ -0.63
SNF5P18480 MEP2YNL142W 1500 nt11.09□□□□□ -0.63
SNF5P18480 SOR2YDL246C 1074 nt11.08□□□□□ -0.64
SNF5P18480 SOR1YJR159W 1074 nt11.08□□□□□ -0.64
SNF5P18480 FPS1YLL043W 2010 nt11.08□□□□□ -0.64
SNF5P18480 FMT1YBL013W 1206 nt11.06□□□□□ -0.64
SNF5P18480 YCL042WYCL042W 360 nt11.05□□□□□ -0.64
SNF5P18480 NME1NME1 340 nt11.04□□□□□ -0.64
SNF5P18480 LCB1YMR296C 1677 nt11.04□□□□□ -0.64
SNF5P18480 SBA1YKL117W 651 nt11.02□□□□□ -0.65
SNF5P18480 TAT1YBR069C 1860 nt11.01□□□□□ -0.65
SNF5P18480 YFR018CYFR018C 1092 nt10.99□□□□□ -0.65
SNF5P18480 PAU16YKL224C 372 nt10.98□□□□□ -0.65
SNF5P18480 PAC11YDR488C 1602 nt10.98□□□□□ -0.65
SNF5P18480 DCW1YKL046C 1350 nt10.92□□□□□ -0.66
SNF5P18480 FMP52YER004W 696 nt10.92□□□□□ -0.66
SNF5P18480 YGR139WYGR139W 339 nt10.91□□□□□ -0.66
SNF5P18480 RTS2YOR077W 699 nt10.91□□□□□ -0.66
SNF5P18480 tL(GAG)GtL(GAG)G 82 nt10.9□□□□□ -0.66
SNF5P18480 CUE1YMR264W 612 nt10.9□□□□□ -0.66
SNF5P18480 RRT5YFR032C 870 nt10.89□□□□□ -0.67
SNF5P18480 IRC15YPL017C 1500 nt10.88□□□□□ -0.67
SNF5P18480 PRE6YOL038W 765 nt10.86□□□□□ -0.67
SNF5P18480 TIM23YNR017W 669 nt10.85□□□□□ -0.67
SNF5P18480 CWP1YKL096W 720 nt10.84□□□□□ -0.67
SNF5P18480 ADH2YMR303C 1047 nt10.82□□□□□ -0.68
SNF5P18480 EMI2YDR516C 1503 nt10.82□□□□□ -0.68
SNF5P18480 YDL221WYDL221W 552 nt10.79□□□□□ -0.68
SNF5P18480 NVJ2YPR091C 2313 nt10.78□□□□□ -0.68
SNF5P18480 DIC1YLR348C 897 nt10.78□□□□□ -0.68
SNF5P18480 GIS3YLR094C 1509 nt10.76□□□□□ -0.69
SNF5P18480 YPR064WYPR064W 420 nt10.75□□□□□ -0.69
SNF5P18480 YLR179CYLR179C 606 nt10.74□□□□□ -0.69
SNF5P18480 TAD3YLR316C 969 nt10.73□□□□□ -0.69
SNF5P18480 SNF6YHL025W 999 nt10.72□□□□□ -0.69
SNF5P18480 YIL100WYIL100W 354 nt10.71□□□□□ -0.69
SNF5P18480 WSC2YNL283C 1512 nt10.7□□□□□ -0.7
SNF5P18480 AHT1YHR093W 549 nt10.7□□□□□ -0.7
SNF5P18480 PCM1YEL058W 1674 nt10.69□□□□□ -0.7
SNF5P18480 YMR090WYMR090W 684 nt10.68□□□□□ -0.7
SNF5P18480 RNQ1YCL028W 1218 nt10.68□□□□□ -0.7
SNF5P18480 YIH1YCR059C 777 nt10.66□□□□□ -0.7
SNF5P18480 YFL066CYFL066C 1179 nt10.65□□□□□ -0.7
SNF5P18480 PEX25YPL112C 1185 nt10.62□□□□□ -0.71
SNF5P18480 NAT4YMR069W 858 nt10.59□□□□□ -0.71
SNF5P18480 YSP3YOR003W 1437 nt10.58□□□□□ -0.72
SNF5P18480 SCC4YER147C 1875 nt10.57□□□□□ -0.72
SNF5P18480 SDH1YKL148C 1923 nt10.56□□□□□ -0.72
SNF5P18480 BDH1YAL060W 1149 nt10.54□□□□□ -0.72
SNF5P18480 AQY1YPR192W 918 nt10.53□□□□□ -0.72
SNF5P18480 YBR220CYBR220C 1683 nt10.53□□□□□ -0.72
SNF5P18480 YNL115CYNL115C 1935 nt10.5□□□□□ -0.73
SNF5P18480 YJL225CYJL225C 5277 nt10.5□□□□□ -0.73
SNF5P18480 GLK1YCL040W 1503 nt10.49□□□□□ -0.73
SNF5P18480 YLL053CYLL053C 459 nt10.49□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms