Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 YEL076C-AYEL076C-A 651 nt19.84■□□□□ 0.77
TY2B-LR1P0C2J3 YEL076CYEL076C 651 nt19.84■□□□□ 0.77
TY2B-LR1P0C2J3 YLR464WYLR464W 651 nt19.84■□□□□ 0.77
TY2B-LR1P0C2J3 DAL1YIR027C 1383 nt19.8■□□□□ 0.76
TY2B-LR1P0C2J3 TRM9YML014W 840 nt19.77■□□□□ 0.76
TY2B-LR1P0C2J3 FUN26YAL022C 1554 nt19.76■□□□□ 0.75
TY2B-LR1P0C2J3 ERV46YAL042W 1248 nt19.74■□□□□ 0.75
TY2B-LR1P0C2J3 INM2YDR287W 879 nt19.73■□□□□ 0.75
TY2B-LR1P0C2J3 ADO1YJR105W 1023 nt19.73■□□□□ 0.75
TY2B-LR1P0C2J3 YJL152WYJL152W 360 nt19.67■□□□□ 0.74
TY2B-LR1P0C2J3 CCT6YDR188W 1641 nt19.64■□□□□ 0.73
TY2B-LR1P0C2J3 MXR2YCL033C 507 nt19.55■□□□□ 0.72
TY2B-LR1P0C2J3 SIS1YNL007C 1059 nt19.48■□□□□ 0.71
TY2B-LR1P0C2J3 IDH1YNL037C 1083 nt19.46■□□□□ 0.71
TY2B-LR1P0C2J3 YDR094WYDR094W 336 nt19.41■□□□□ 0.7
TY2B-LR1P0C2J3 YDR433WYDR433W 441 nt19.39■□□□□ 0.7
TY2B-LR1P0C2J3 TIR4YOR009W 1464 nt19.35■□□□□ 0.69
TY2B-LR1P0C2J3 YFL015W-AYFL015W-A 318 nt19.34■□□□□ 0.69
TY2B-LR1P0C2J3 ALF1YNL148C 765 nt19.33■□□□□ 0.68
TY2B-LR1P0C2J3 SUF2tP(AGG)C 72 nt19.32■□□□□ 0.68
TY2B-LR1P0C2J3 SUF10tP(AGG)N 72 nt19.32■□□□□ 0.68
TY2B-LR1P0C2J3 GBP2YCL011C 1284 nt19.27■□□□□ 0.67
TY2B-LR1P0C2J3 YPS1YLR120C 1710 nt19.24■□□□□ 0.67
TY2B-LR1P0C2J3 YKR040CYKR040C 504 nt19.23■□□□□ 0.67
TY2B-LR1P0C2J3 YDR095CYDR095C 411 nt19.21■□□□□ 0.67
TY2B-LR1P0C2J3 PTH1YHR189W 573 nt19.14■□□□□ 0.65
TY2B-LR1P0C2J3 HUA1YGR268C 597 nt19.09■□□□□ 0.65
TY2B-LR1P0C2J3 SBA1YKL117W 651 nt18.96■□□□□ 0.63
TY2B-LR1P0C2J3 YCL048W-AYCL048W-A 240 nt18.92■□□□□ 0.62
TY2B-LR1P0C2J3 FRD1YEL047C 1413 nt18.89■□□□□ 0.61
TY2B-LR1P0C2J3 PAU16YKL224C 372 nt18.87■□□□□ 0.61
TY2B-LR1P0C2J3 TCD2YKL027W 1344 nt18.85■□□□□ 0.61
TY2B-LR1P0C2J3 YHR165W-AYHR165W-A 312 nt18.85■□□□□ 0.61
TY2B-LR1P0C2J3 ART5YGR068C 1761 nt18.83■□□□□ 0.6
TY2B-LR1P0C2J3 CAC2YML102W 1407 nt18.82■□□□□ 0.6
TY2B-LR1P0C2J3 YMR057CYMR057C 372 nt18.81■□□□□ 0.6
TY2B-LR1P0C2J3 GFD2YCL036W 1701 nt18.8■□□□□ 0.6
TY2B-LR1P0C2J3 DED1YOR204W 1815 nt18.77■□□□□ 0.6
TY2B-LR1P0C2J3 PRE6YOL038W 765 nt18.76■□□□□ 0.59
TY2B-LR1P0C2J3 PTP1YDL230W 1008 nt18.67■□□□□ 0.58
TY2B-LR1P0C2J3 RPP2AYOL039W 321 nt18.67■□□□□ 0.58
TY2B-LR1P0C2J3 RTS2YOR077W 699 nt18.67■□□□□ 0.58
TY2B-LR1P0C2J3 SOR2YDL246C 1074 nt18.65■□□□□ 0.58
TY2B-LR1P0C2J3 SOR1YJR159W 1074 nt18.65■□□□□ 0.58
TY2B-LR1P0C2J3 RRD1YIL153W 1182 nt18.65■□□□□ 0.58
TY2B-LR1P0C2J3 LCB1YMR296C 1677 nt18.61■□□□□ 0.57
TY2B-LR1P0C2J3 YLR235CYLR235C 399 nt18.57■□□□□ 0.56
TY2B-LR1P0C2J3 YKL030WYKL030W 606 nt18.55■□□□□ 0.56
TY2B-LR1P0C2J3 FMT1YBL013W 1206 nt18.55■□□□□ 0.56
TY2B-LR1P0C2J3 YCL042WYCL042W 360 nt18.51■□□□□ 0.55
TY2B-LR1P0C2J3 PET9YBL030C 957 nt18.5■□□□□ 0.55
TY2B-LR1P0C2J3 YFR018CYFR018C 1092 nt18.49■□□□□ 0.55
TY2B-LR1P0C2J3 FPS1YLL043W 2010 nt18.43■□□□□ 0.54
TY2B-LR1P0C2J3 DCW1YKL046C 1350 nt18.32■□□□□ 0.52
TY2B-LR1P0C2J3 TIM23YNR017W 669 nt18.31■□□□□ 0.52
TY2B-LR1P0C2J3 tL(GAG)GtL(GAG)G 82 nt18.3■□□□□ 0.52
TY2B-LR1P0C2J3 MEP2YNL142W 1500 nt18.26■□□□□ 0.51
TY2B-LR1P0C2J3 CWP1YKL096W 720 nt18.19■□□□□ 0.5
TY2B-LR1P0C2J3 RRT5YFR032C 870 nt18.18■□□□□ 0.5
TY2B-LR1P0C2J3 SNF6YHL025W 999 nt18.18■□□□□ 0.5
TY2B-LR1P0C2J3 DIC1YLR348C 897 nt18.18■□□□□ 0.5
TY2B-LR1P0C2J3 CUE1YMR264W 612 nt18.14■□□□□ 0.49
TY2B-LR1P0C2J3 IRC15YPL017C 1500 nt18.13■□□□□ 0.49
TY2B-LR1P0C2J3 YLR179CYLR179C 606 nt18.13■□□□□ 0.49
TY2B-LR1P0C2J3 ADH2YMR303C 1047 nt18.11■□□□□ 0.49
TY2B-LR1P0C2J3 FMP52YER004W 696 nt18.04■□□□□ 0.48
TY2B-LR1P0C2J3 YFL066CYFL066C 1179 nt18.01■□□□□ 0.47
TY2B-LR1P0C2J3 WSC2YNL283C 1512 nt17.96■□□□□ 0.47
TY2B-LR1P0C2J3 EMI2YDR516C 1503 nt17.95■□□□□ 0.46
TY2B-LR1P0C2J3 PEX25YPL112C 1185 nt17.95■□□□□ 0.46
TY2B-LR1P0C2J3 YPR064WYPR064W 420 nt17.95■□□□□ 0.46
TY2B-LR1P0C2J3 SPT5YML010W 3192 nt17.83■□□□□ 0.44
TY2B-LR1P0C2J3 TAD3YLR316C 969 nt17.81■□□□□ 0.44
TY2B-LR1P0C2J3 YDL221WYDL221W 552 nt17.79■□□□□ 0.44
TY2B-LR1P0C2J3 YIL100WYIL100W 354 nt17.77■□□□□ 0.44
TY2B-LR1P0C2J3 NAT4YMR069W 858 nt17.76■□□□□ 0.43
TY2B-LR1P0C2J3 GIS3YLR094C 1509 nt17.75■□□□□ 0.43
TY2B-LR1P0C2J3 YIH1YCR059C 777 nt17.74■□□□□ 0.43
TY2B-LR1P0C2J3 YNL115CYNL115C 1935 nt17.68■□□□□ 0.42
TY2B-LR1P0C2J3 GLK1YCL040W 1503 nt17.68■□□□□ 0.42
TY2B-LR1P0C2J3 PCM1YEL058W 1674 nt17.67■□□□□ 0.42
TY2B-LR1P0C2J3 MIR1YJR077C 936 nt17.66■□□□□ 0.42
TY2B-LR1P0C2J3 YSP3YOR003W 1437 nt17.66■□□□□ 0.42
TY2B-LR1P0C2J3 AHT1YHR093W 549 nt17.65■□□□□ 0.42
TY2B-LR1P0C2J3 MSF1YPR047W 1410 nt17.65■□□□□ 0.42
TY2B-LR1P0C2J3 YSC84YHR016C 1407 nt17.6■□□□□ 0.41
TY2B-LR1P0C2J3 BDH1YAL060W 1149 nt17.57■□□□□ 0.4
TY2B-LR1P0C2J3 YLL053CYLL053C 459 nt17.57■□□□□ 0.4
TY2B-LR1P0C2J3 YMR244WYMR244W 1068 nt17.56■□□□□ 0.4
TY2B-LR1P0C2J3 RNQ1YCL028W 1218 nt17.55■□□□□ 0.4
TY2B-LR1P0C2J3 FTR1YER145C 1215 nt17.51■□□□□ 0.39
TY2B-LR1P0C2J3 BIO4YNR057C 714 nt17.48■□□□□ 0.39
TY2B-LR1P0C2J3 YLR415CYLR415C 339 nt17.47■□□□□ 0.39
TY2B-LR1P0C2J3 SDH1YKL148C 1923 nt17.45■□□□□ 0.38
TY2B-LR1P0C2J3 SCC4YER147C 1875 nt17.44■□□□□ 0.38
TY2B-LR1P0C2J3 THI74YDR438W 1113 nt17.42■□□□□ 0.38
TY2B-LR1P0C2J3 GLR1YPL091W 1452 nt17.39■□□□□ 0.37
TY2B-LR1P0C2J3 TRM5YHR070W 1500 nt17.38■□□□□ 0.37
TY2B-LR1P0C2J3 GAL1YBR020W 1587 nt17.36■□□□□ 0.37
TY2B-LR1P0C2J3 VPS75YNL246W 795 nt17.35■□□□□ 0.37
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms