Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 MKK2YPL140C 1521 nt5.84□□□□□ -1.47
CLP1Q08685 SPC97YHR172W 2472 nt5.84□□□□□ -1.47
CLP1Q08685 MRPL1YDR116C 858 nt5.84□□□□□ -1.47
CLP1Q08685 PDE1YGL248W 1110 nt5.84□□□□□ -1.47
CLP1Q08685 PHB1YGR132C 864 nt5.84□□□□□ -1.47
CLP1Q08685 SSP120YLR250W 705 nt5.84□□□□□ -1.47
CLP1Q08685 DOM34YNL001W 1161 nt5.84□□□□□ -1.47
CLP1Q08685 YBR144CYBR144C 315 nt5.84□□□□□ -1.47
CLP1Q08685 IFA38YBR159W 1044 nt5.84□□□□□ -1.47
CLP1Q08685 PIF1YML061C 2580 nt5.84□□□□□ -1.47
CLP1Q08685 YDR278CYDR278C 318 nt5.83□□□□□ -1.48
CLP1Q08685 PAN6YIL145C 930 nt5.83□□□□□ -1.48
CLP1Q08685 MKC7YDR144C 1791 nt5.83□□□□□ -1.48
CLP1Q08685 YGR022CYGR022C 330 nt5.82□□□□□ -1.48
CLP1Q08685 tR(ACG)DtR(ACG)D 73 nt5.82□□□□□ -1.48
CLP1Q08685 tR(ACG)EtR(ACG)E 73 nt5.82□□□□□ -1.48
CLP1Q08685 tR(ACG)KtR(ACG)K 73 nt5.82□□□□□ -1.48
CLP1Q08685 tR(ACG)LtR(ACG)L 73 nt5.82□□□□□ -1.48
CLP1Q08685 tR(ACG)OtR(ACG)O 73 nt5.82□□□□□ -1.48
CLP1Q08685 YKL107WYKL107W 930 nt5.82□□□□□ -1.48
CLP1Q08685 ICT1YLR099C 1185 nt5.82□□□□□ -1.48
CLP1Q08685 MCM3YEL032W 2916 nt5.81□□□□□ -1.48
CLP1Q08685 TEP1YNL128W 1305 nt5.81□□□□□ -1.48
CLP1Q08685 CNE1YAL058W 1509 nt5.81□□□□□ -1.48
CLP1Q08685 COX9YDL067C 180 nt5.81□□□□□ -1.48
CLP1Q08685 RPT6YGL048C 1218 nt5.81□□□□□ -1.48
CLP1Q08685 PEX32YBR168W 1242 nt5.81□□□□□ -1.48
CLP1Q08685 ARO10YDR380W 1908 nt5.81□□□□□ -1.48
CLP1Q08685 VID30YGL227W 2877 nt5.81□□□□□ -1.48
CLP1Q08685 MCX1YBR227C 1563 nt5.8□□□□□ -1.48
CLP1Q08685 NUD1YOR373W 2556 nt5.8□□□□□ -1.48
CLP1Q08685 YDR514CYDR514C 1452 nt5.8□□□□□ -1.48
CLP1Q08685 DJP1YIR004W 1299 nt5.8□□□□□ -1.48
CLP1Q08685 ARA2YMR041C 1008 nt5.8□□□□□ -1.48
CLP1Q08685 STB5YHR178W 2232 nt5.8□□□□□ -1.48
CLP1Q08685 PYC2YBR218C 3543 nt5.79□□□□□ -1.48
CLP1Q08685 VPS72YDR485C 2388 nt5.79□□□□□ -1.48
CLP1Q08685 PET112YBL080C 1626 nt5.79□□□□□ -1.48
CLP1Q08685 YCR047W-AYCR047W-A 207 nt5.79□□□□□ -1.48
CLP1Q08685 YDL114WYDL114W 927 nt5.79□□□□□ -1.48
CLP1Q08685 RRP4YHR069C 1080 nt5.79□□□□□ -1.48
CLP1Q08685 VMA13YPR036W 1437 nt5.79□□□□□ -1.48
CLP1Q08685 AMD1YML035C 2433 nt5.79□□□□□ -1.48
CLP1Q08685 ARN2YHL047C 1863 nt5.79□□□□□ -1.48
CLP1Q08685 PRP24YMR268C 1335 nt5.78□□□□□ -1.48
CLP1Q08685 GLE1YDL207W 1617 nt5.78□□□□□ -1.48
CLP1Q08685 YHL017WYHL017W 1599 nt5.78□□□□□ -1.48
CLP1Q08685 YML083CYML083C 1257 nt5.78□□□□□ -1.48
CLP1Q08685 CAM1YPL048W 1248 nt5.78□□□□□ -1.48
CLP1Q08685 VPS70YJR126C 2436 nt5.78□□□□□ -1.48
CLP1Q08685 GIR2YDR152W 798 nt5.77□□□□□ -1.49
CLP1Q08685 EFM3YJR129C 1020 nt5.77□□□□□ -1.49
CLP1Q08685 MRP17YKL003C 396 nt5.77□□□□□ -1.49
CLP1Q08685 AFT1YGL071W 2073 nt5.77□□□□□ -1.49
CLP1Q08685 CYK3YDL117W 2658 nt5.77□□□□□ -1.49
CLP1Q08685 KCH1YJR054W 1494 nt5.77□□□□□ -1.49
CLP1Q08685 FRS2YFL022C 1512 nt5.76□□□□□ -1.49
CLP1Q08685 YOL163WYOL163W 510 nt5.76□□□□□ -1.49
CLP1Q08685 YME1YPR024W 2244 nt5.75□□□□□ -1.49
CLP1Q08685 YCL065WYCL065W 369 nt5.75□□□□□ -1.49
CLP1Q08685 ADY2YCR010C 852 nt5.75□□□□□ -1.49
CLP1Q08685 URA3YEL021W 804 nt5.75□□□□□ -1.49
CLP1Q08685 YNR040WYNR040W 771 nt5.75□□□□□ -1.49
CLP1Q08685 APE3YBR286W 1614 nt5.74□□□□□ -1.49
CLP1Q08685 ARP2YDL029W 1176 nt5.74□□□□□ -1.49
CLP1Q08685 YKL031WYKL031W 414 nt5.74□□□□□ -1.49
CLP1Q08685 RPS9AYPL081W 594 nt5.74□□□□□ -1.49
CLP1Q08685 MRC1YCL061C 3291 nt5.73□□□□□ -1.49
CLP1Q08685 RRN3YKL125W 1884 nt5.73□□□□□ -1.49
CLP1Q08685 YRA1YDR381W 681 nt5.73□□□□□ -1.49
CLP1Q08685 YGL185CYGL185C 1140 nt5.73□□□□□ -1.49
CLP1Q08685 DAL3YIR032C 588 nt5.73□□□□□ -1.49
CLP1Q08685 GON7YJL184W 372 nt5.73□□□□□ -1.49
CLP1Q08685 YNL019CYNL019C 855 nt5.73□□□□□ -1.49
CLP1Q08685 YNL033WYNL033W 855 nt5.73□□□□□ -1.49
CLP1Q08685 MRPL36YBR122C 534 nt5.73□□□□□ -1.49
CLP1Q08685 YAP1801YHR161C 1914 nt5.73□□□□□ -1.49
CLP1Q08685 PDR18YNR070W 4002 nt5.73□□□□□ -1.49
CLP1Q08685 ADE13YLR359W 1449 nt5.73□□□□□ -1.49
CLP1Q08685 YPL277CYPL277C 1464 nt5.72□□□□□ -1.49
CLP1Q08685 DRS1YLL008W 2259 nt5.72□□□□□ -1.49
CLP1Q08685 PGK1YCR012W 1251 nt5.72□□□□□ -1.49
CLP1Q08685 YER186CYER186C 921 nt5.72□□□□□ -1.49
CLP1Q08685 HAP2YGL237C 798 nt5.72□□□□□ -1.49
CLP1Q08685 LYS12YIL094C 1116 nt5.72□□□□□ -1.49
CLP1Q08685 SUP2tY(GUA)D 75 nt5.72□□□□□ -1.49
CLP1Q08685 SUP11tY(GUA)F1 75 nt5.72□□□□□ -1.49
CLP1Q08685 SUP6tY(GUA)F2 75 nt5.72□□□□□ -1.49
CLP1Q08685 SUP7tY(GUA)J1 75 nt5.72□□□□□ -1.49
CLP1Q08685 SUP4tY(GUA)J2 75 nt5.72□□□□□ -1.49
CLP1Q08685 SUP5tY(GUA)M1 75 nt5.72□□□□□ -1.49
CLP1Q08685 SUP8tY(GUA)M2 75 nt5.72□□□□□ -1.49
CLP1Q08685 SUP3tY(GUA)O 75 nt5.72□□□□□ -1.49
CLP1Q08685 ARG1YOL058W 1263 nt5.72□□□□□ -1.49
CLP1Q08685 YPR123CYPR123C 435 nt5.72□□□□□ -1.49
CLP1Q08685 RRT2YBR246W 1164 nt5.72□□□□□ -1.49
CLP1Q08685 PTK2YJR059W 2457 nt5.72□□□□□ -1.49
CLP1Q08685 IMA1YGR287C 1770 nt5.72□□□□□ -1.49
CLP1Q08685 SOG2YOR353C 2376 nt5.71□□□□□ -1.5
CLP1Q08685 AMA1YGR225W 1782 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 119.9 ms