Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 SDH3YKL141W 597 nt6.98□□□□□ -1.29
TY1A-MR1Q04215 TIS11YLR136C 858 nt6.98□□□□□ -1.29
TY1A-MR1Q04215 YNR061CYNR061C 660 nt6.98□□□□□ -1.29
TY1A-MR1Q04215 YPR016W-AYPR016W-A 261 nt6.98□□□□□ -1.29
TY1A-MR1Q04215 RRG8YPR116W 834 nt6.98□□□□□ -1.29
TY1A-MR1Q04215 CKS1YBR135W 453 nt6.98□□□□□ -1.29
TY1A-MR1Q04215 EHT1YBR177C 1356 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 IRC6YFR043C 714 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 YRB2YIL063C 984 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 YJL171CYJL171C 1191 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 YJR011CYJR011C 786 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 MAC1YMR021C 1254 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 CPA1YOR303W 1236 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 YER152CYER152C 1332 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 PMT2YAL023C 2280 nt6.97□□□□□ -1.29
TY1A-MR1Q04215 TAD1YGL243W 1203 nt6.96□□□□□ -1.3
TY1A-MR1Q04215 SFK1YKL051W 1062 nt6.96□□□□□ -1.3
TY1A-MR1Q04215 MRP49YKL167C 414 nt6.96□□□□□ -1.3
TY1A-MR1Q04215 EBP2YKL172W 1284 nt6.96□□□□□ -1.3
TY1A-MR1Q04215 CDD1YLR245C 429 nt6.96□□□□□ -1.3
TY1A-MR1Q04215 YBL068W-AYBL068W-A 237 nt6.96□□□□□ -1.3
TY1A-MR1Q04215 YOR338WYOR338W 1092 nt6.96□□□□□ -1.3
TY1A-MR1Q04215 MTH1YDR277C 1302 nt6.96□□□□□ -1.3
TY1A-MR1Q04215 RMD1YDL001W 1293 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 RPB7YDR404C 516 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 BMH1YER177W 804 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 YGR115CYGR115C 780 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 CIR1YGR207C 786 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 CIC1YHR052W 1131 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 YLL037WYLL037W 381 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 GPN3YLR243W 819 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 RCF1YML030W 480 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 YNL050CYNL050C 813 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 YNR062CYNR062C 984 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 PEX32YBR168W 1242 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 CNM67YNL225C 1746 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 FDC1YDR539W 1512 nt6.95□□□□□ -1.3
TY1A-MR1Q04215 YGR015CYGR015C 987 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 EFG1YGR271C-A 702 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 CDC11YJR076C 1248 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 YHC1YLR298C 696 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 ATP10YLR393W 840 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 RPN13YLR421C 471 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 HEK2YBL032W 1146 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 snR19snR19 568 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 TOP3YLR234W 1971 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 TAF8YML114C 1533 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 PMT1YDL095W 2454 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 EUG1YDR518W 1554 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 COR1YBL045C 1374 nt6.94□□□□□ -1.3
TY1A-MR1Q04215 WTM2YOR229W 1404 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 RGL1YPL066W 1440 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 RSC9YML127W 1746 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 ARO3YDR035W 1113 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 CPR1YDR155C 489 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 YPT31YER031C 672 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 YKL162CYKL162C 1209 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 SER1YOR184W 1188 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 YPL102CYPL102C 303 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 ADH5YBR145W 1056 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 YBR255C-AYBR255C-A 363 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 KAR4YCL055W 1008 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 YNL011CYNL011C 1335 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 WSC3YOL105C 1671 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 MRS2YOR334W 1413 nt6.93□□□□□ -1.3
TY1A-MR1Q04215 CLN2YPL256C 1638 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 CPR4YCR069W 957 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 AIM6YDL237W 1173 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 PAD1YDR538W 729 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 AIM19YIL087C 474 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 YIL163CYIL163C 354 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 YJR142WYJR142W 1029 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 HRT3YLR097C 1035 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 ADH3YMR083W 1128 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 SSO2YMR183C 888 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 PRS4YBL068W 981 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 YBR219CYBR219C 384 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 YDR261W-AYDR261W-A 1317 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 YLR446WYLR446W 1302 nt6.92□□□□□ -1.3
TY1A-MR1Q04215 PRP19YLL036C 1512 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 CIK1YMR198W 1785 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 MSS2YDL107W 1056 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 URA3YEL021W 804 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 PHB2YGR231C 933 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 CBF1YJR060W 1056 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 RRT7YLL030C 342 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 REC102YLR329W 795 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 ERG6YML008C 1152 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 RNA170RNA170 169 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 YNL108CYNL108C 813 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 DUG3YNL191W 1074 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 ENV7YPL236C 1095 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 RRT2YBR246W 1164 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 DXO1YDR370C 1329 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 LPL1YOR059C 1353 nt6.91□□□□□ -1.3
TY1A-MR1Q04215 IPK1YDR315C 846 nt6.9□□□□□ -1.3
TY1A-MR1Q04215 OPI7YDR360W 435 nt6.9□□□□□ -1.3
TY1A-MR1Q04215 CNN1YFR046C 1086 nt6.9□□□□□ -1.3
TY1A-MR1Q04215 YGR137WYGR137W 375 nt6.9□□□□□ -1.3
TY1A-MR1Q04215 YHR180WYHR180W 492 nt6.9□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms