Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 GPA2YER020W 1350 nt7.17□□□□□ -1.26
VPS27P40343 VPS72YDR485C 2388 nt7.16□□□□□ -1.26
VPS27P40343 ENT2YLR206W 1842 nt7.15□□□□□ -1.26
VPS27P40343 YCL065WYCL065W 369 nt7.15□□□□□ -1.26
VPS27P40343 YRA1YDR381W 681 nt7.15□□□□□ -1.26
VPS27P40343 SOH1YGL127C 384 nt7.15□□□□□ -1.26
VPS27P40343 ORC5YNL261W 1440 nt7.15□□□□□ -1.27
VPS27P40343 SIT1YEL065W 1887 nt7.15□□□□□ -1.27
VPS27P40343 YCR047W-AYCR047W-A 207 nt7.14□□□□□ -1.27
VPS27P40343 SPG1YGR236C 288 nt7.14□□□□□ -1.27
VPS27P40343 PUF3YLL013C 2640 nt7.14□□□□□ -1.27
VPS27P40343 MSS116YDR194C 1995 nt7.13□□□□□ -1.27
VPS27P40343 DDC1YPL194W 1839 nt7.13□□□□□ -1.27
VPS27P40343 snR82snR82 268 nt7.13□□□□□ -1.27
VPS27P40343 SFC1YJR095W 969 nt7.13□□□□□ -1.27
VPS27P40343 ASK1YKL052C 879 nt7.13□□□□□ -1.27
VPS27P40343 CCP1YKR066C 1086 nt7.13□□□□□ -1.27
VPS27P40343 RPS15YOL040C 429 nt7.13□□□□□ -1.27
VPS27P40343 VMS1YDR049W 1899 nt7.13□□□□□ -1.27
VPS27P40343 ALD6YPL061W 1503 nt7.12□□□□□ -1.27
VPS27P40343 MDH3YDL078C 1032 nt7.12□□□□□ -1.27
VPS27P40343 SHM1YBR263W 1473 nt7.11□□□□□ -1.27
VPS27P40343 SIP2YGL208W 1248 nt7.11□□□□□ -1.27
VPS27P40343 JJJ3YJR097W 519 nt7.11□□□□□ -1.27
VPS27P40343 HCR1YLR192C 798 nt7.11□□□□□ -1.27
VPS27P40343 SHP1YBL058W 1272 nt7.11□□□□□ -1.27
VPS27P40343 SEC18YBR080C 2277 nt7.11□□□□□ -1.27
VPS27P40343 PAN6YIL145C 930 nt7.1□□□□□ -1.27
VPS27P40343 YIR017W-AYIR017W-A 600 nt7.1□□□□□ -1.27
VPS27P40343 ARO10YDR380W 1908 nt7.09□□□□□ -1.27
VPS27P40343 BUL1YMR275C 2931 nt7.09□□□□□ -1.27
VPS27P40343 KTR5YNL029C 1569 nt7.09□□□□□ -1.27
VPS27P40343 STL1YDR536W 1710 nt7.08□□□□□ -1.28
VPS27P40343 PAP1YKR002W 1707 nt7.08□□□□□ -1.28
VPS27P40343 TRP5YGL026C 2124 nt7.08□□□□□ -1.28
VPS27P40343 SSK1YLR006C 2139 nt7.08□□□□□ -1.28
VPS27P40343 POP1YNL221C 2628 nt7.08□□□□□ -1.28
VPS27P40343 PSH1YOL054W 1221 nt7.07□□□□□ -1.28
VPS27P40343 RRT2YBR246W 1164 nt7.07□□□□□ -1.28
VPS27P40343 YNL247WYNL247W 2304 nt7.07□□□□□ -1.28
VPS27P40343 YMR155WYMR155W 1644 nt7.06□□□□□ -1.28
VPS27P40343 SNO4YMR322C 714 nt7.06□□□□□ -1.28
VPS27P40343 HSP33YOR391C 714 nt7.06□□□□□ -1.28
VPS27P40343 HSP32YPL280W 714 nt7.06□□□□□ -1.28
VPS27P40343 AIM17YHL021C 1398 nt7.06□□□□□ -1.28
VPS27P40343 TBF1YPL128C 1689 nt7.05□□□□□ -1.28
VPS27P40343 YDR154CYDR154C 351 nt7.03□□□□□ -1.28
VPS27P40343 AVO2YMR068W 1281 nt7.03□□□□□ -1.28
VPS27P40343 RHO2YNL090W 579 nt7.03□□□□□ -1.28
VPS27P40343 ATG23YLR431C 1362 nt7.03□□□□□ -1.28
VPS27P40343 GEX1YCL073C 1848 nt7.03□□□□□ -1.28
VPS27P40343 GEX2YKR106W 1848 nt7.03□□□□□ -1.28
VPS27P40343 UTP9YHR196W 1728 nt7.02□□□□□ -1.29
VPS27P40343 BAP2YBR068C 1830 nt7.02□□□□□ -1.29
VPS27P40343 TRK2YKR050W 2670 nt7.02□□□□□ -1.29
VPS27P40343 YGR127WYGR127W 939 nt7.02□□□□□ -1.29
VPS27P40343 PGA3YML125C 939 nt7.02□□□□□ -1.29
VPS27P40343 TEF1YPR080W 1377 nt7.02□□□□□ -1.29
VPS27P40343 TEF2YBR118W 1377 nt7.02□□□□□ -1.29
VPS27P40343 VHT1YGR065C 1782 nt7.02□□□□□ -1.29
VPS27P40343 YDL144CYDL144C 1071 nt7.01□□□□□ -1.29
VPS27P40343 SEN34YAR008W 828 nt7.01□□□□□ -1.29
VPS27P40343 DUG1YFR044C 1446 nt7.01□□□□□ -1.29
VPS27P40343 YKL031WYKL031W 414 nt7□□□□□ -1.29
VPS27P40343 YJU2YKL095W 837 nt7□□□□□ -1.29
VPS27P40343 LST8YNL006W 912 nt7□□□□□ -1.29
VPS27P40343 YNR075C-AYNR075C-A 93 nt7□□□□□ -1.29
VPS27P40343 SLD7YOR060C 774 nt7□□□□□ -1.29
VPS27P40343 NOP7YGR103W 1818 nt6.99□□□□□ -1.29
VPS27P40343 SHE10YGL228W 1734 nt6.99□□□□□ -1.29
VPS27P40343 PCS60YBR222C 1632 nt6.99□□□□□ -1.29
VPS27P40343 REV7YIL139C 738 nt6.99□□□□□ -1.29
VPS27P40343 QNS1YHR074W 2145 nt6.98□□□□□ -1.29
VPS27P40343 YKR073CYKR073C 321 nt6.98□□□□□ -1.29
VPS27P40343 YPR098CYPR098C 486 nt6.98□□□□□ -1.29
VPS27P40343 ARR3YPR201W 1215 nt6.98□□□□□ -1.29
VPS27P40343 UGO1YDR470C 1509 nt6.97□□□□□ -1.29
VPS27P40343 UTP7YER082C 1665 nt6.97□□□□□ -1.29
VPS27P40343 EPS1YIL005W 2106 nt6.97□□□□□ -1.29
VPS27P40343 MRPL22YNL177C 930 nt6.97□□□□□ -1.29
VPS27P40343 PDH1YPR002W 1551 nt6.97□□□□□ -1.29
VPS27P40343 TNA1YGR260W 1605 nt6.97□□□□□ -1.29
VPS27P40343 UTP18YJL069C 1785 nt6.96□□□□□ -1.3
VPS27P40343 HEM3YDL205C 984 nt6.96□□□□□ -1.3
VPS27P40343 MTQ2YDR140W 666 nt6.96□□□□□ -1.3
VPS27P40343 HSX1tR(CCU)J 72 nt6.96□□□□□ -1.3
VPS27P40343 YIL060WYIL060W 435 nt6.96□□□□□ -1.3
VPS27P40343 DOM34YNL001W 1161 nt6.96□□□□□ -1.3
VPS27P40343 PGA2YNL149C 390 nt6.96□□□□□ -1.3
VPS27P40343 YBR056C-BYBR056C-B 159 nt6.96□□□□□ -1.3
VPS27P40343 YBR230W-AYBR230W-A 201 nt6.96□□□□□ -1.3
VPS27P40343 GPT2YKR067W 2232 nt6.96□□□□□ -1.3
VPS27P40343 SET5YHR207C 1581 nt6.95□□□□□ -1.3
VPS27P40343 tN(GUU)CtN(GUU)C 74 nt6.95□□□□□ -1.3
VPS27P40343 tN(GUU)FtN(GUU)F 74 nt6.95□□□□□ -1.3
VPS27P40343 tN(GUU)GtN(GUU)G 74 nt6.95□□□□□ -1.3
VPS27P40343 tN(GUU)KtN(GUU)K 74 nt6.95□□□□□ -1.3
VPS27P40343 tN(GUU)LtN(GUU)L 74 nt6.95□□□□□ -1.3
VPS27P40343 tN(GUU)N1tN(GUU)N1 74 nt6.95□□□□□ -1.3
VPS27P40343 tN(GUU)N2tN(GUU)N2 74 nt6.95□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 58.7 ms