Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx6-2D3Z4R4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-2D3Z4R4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-2D3Z4R4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-2D3Z4R4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-2D3Z4R4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-2D3Z4R4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-2D3Z4R4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-2D3Z4R4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx6-2D3Z4R4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nkx6-2D3Z4R4 Gm16148-201ENSMUST00000119653 893 ntBASIC17.29■□□□□ 0.36
Nkx6-2D3Z4R4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Nkx6-2D3Z4R4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-2D3Z4R4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx6-2D3Z4R4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-2D3Z4R4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-2D3Z4R4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-2D3Z4R4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-2D3Z4R4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-2D3Z4R4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx6-2D3Z4R4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.27■□□□□ 0.36
Nkx6-2D3Z4R4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx6-2D3Z4R4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Nkx6-2D3Z4R4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.27■□□□□ 0.36
Nkx6-2D3Z4R4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.27■□□□□ 0.36
Nkx6-2D3Z4R4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-2D3Z4R4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-2D3Z4R4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx6-2D3Z4R4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-2D3Z4R4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-2D3Z4R4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-2D3Z4R4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx6-2D3Z4R4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-2D3Z4R4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-2D3Z4R4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-2D3Z4R4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx6-2D3Z4R4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.25■□□□□ 0.35
Nkx6-2D3Z4R4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-2D3Z4R4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-2D3Z4R4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-2D3Z4R4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-2D3Z4R4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-2D3Z4R4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx6-2D3Z4R4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx6-2D3Z4R4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-2D3Z4R4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Nkx6-2D3Z4R4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-2D3Z4R4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-2D3Z4R4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-2D3Z4R4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Gm8109-201ENSMUST00000194076 746 ntBASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-2D3Z4R4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-2D3Z4R4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-2D3Z4R4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-2D3Z4R4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.21■□□□□ 0.35
Nkx6-2D3Z4R4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-2D3Z4R4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-2D3Z4R4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nkx6-2D3Z4R4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Nkx6-2D3Z4R4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nkx6-2D3Z4R4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-2D3Z4R4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx6-2D3Z4R4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-2D3Z4R4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.2■□□□□ 0.34
Nkx6-2D3Z4R4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Nkx6-2D3Z4R4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-2D3Z4R4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-2D3Z4R4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Nkx6-2D3Z4R4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-2D3Z4R4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-2D3Z4R4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-2D3Z4R4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-2D3Z4R4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nkx6-2D3Z4R4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-2D3Z4R4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-2D3Z4R4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.18■□□□□ 0.34
Nkx6-2D3Z4R4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms