Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 DUS4YLR405W 1104 nt6.82□□□□□ -1.32
RPT4P53549 ERI1YPL096C-A 207 nt6.82□□□□□ -1.32
RPT4P53549 ECM38YLR299W 1983 nt6.82□□□□□ -1.32
RPT4P53549 BDF2YDL070W 1917 nt6.82□□□□□ -1.32
RPT4P53549 AMD1YML035C 2433 nt6.81□□□□□ -1.32
RPT4P53549 GLE1YDL207W 1617 nt6.81□□□□□ -1.32
RPT4P53549 YEA6YEL006W 1008 nt6.81□□□□□ -1.32
RPT4P53549 DJP1YIR004W 1299 nt6.81□□□□□ -1.32
RPT4P53549 MRPL13YKR006C 795 nt6.81□□□□□ -1.32
RPT4P53549 ATO2YNR002C 849 nt6.81□□□□□ -1.32
RPT4P53549 YDL057WYDL057W 987 nt6.8□□□□□ -1.32
RPT4P53549 IDP3YNL009W 1263 nt6.8□□□□□ -1.32
RPT4P53549 YOR300WYOR300W 309 nt6.8□□□□□ -1.32
RPT4P53549 ARP3YJR065C 1350 nt6.8□□□□□ -1.32
RPT4P53549 ADE13YLR359W 1449 nt6.79□□□□□ -1.32
RPT4P53549 VRP1YLR337C 2454 nt6.79□□□□□ -1.32
RPT4P53549 PET112YBL080C 1626 nt6.79□□□□□ -1.32
RPT4P53549 CDC13YDL220C 2775 nt6.79□□□□□ -1.32
RPT4P53549 FAF1YIL019W 1041 nt6.78□□□□□ -1.32
RPT4P53549 APS3YJL024C 585 nt6.78□□□□□ -1.32
RPT4P53549 COG1YGL223C 1254 nt6.77□□□□□ -1.33
RPT4P53549 SMK1YPR054W 1167 nt6.77□□□□□ -1.33
RPT4P53549 YBR230W-AYBR230W-A 201 nt6.77□□□□□ -1.33
RPT4P53549 GIR2YDR152W 798 nt6.76□□□□□ -1.33
RPT4P53549 YCL041CYCL041C 495 nt6.76□□□□□ -1.33
RPT4P53549 DAL7YIR031C 1665 nt6.76□□□□□ -1.33
RPT4P53549 YAP1801YHR161C 1914 nt6.76□□□□□ -1.33
RPT4P53549 YMR155WYMR155W 1644 nt6.76□□□□□ -1.33
RPT4P53549 ATO3YDR384C 828 nt6.75□□□□□ -1.33
RPT4P53549 YHC3YJL059W 1227 nt6.75□□□□□ -1.33
RPT4P53549 ERG3YLR056W 1098 nt6.75□□□□□ -1.33
RPT4P53549 DAL82YNL314W 768 nt6.75□□□□□ -1.33
RPT4P53549 HAL5YJL165C 2568 nt6.75□□□□□ -1.33
RPT4P53549 NMD5YJR132W 3147 nt6.75□□□□□ -1.33
RPT4P53549 TOS2YGR221C 1869 nt6.75□□□□□ -1.33
RPT4P53549 PRP46YPL151C 1356 nt6.74□□□□□ -1.33
RPT4P53549 SEC20YDR498C 1152 nt6.74□□□□□ -1.33
RPT4P53549 YGR176WYGR176W 348 nt6.74□□□□□ -1.33
RPT4P53549 MOD5YOR274W 1287 nt6.74□□□□□ -1.33
RPT4P53549 SSO1YPL232W 873 nt6.74□□□□□ -1.33
RPT4P53549 HSP26YBR072W 645 nt6.74□□□□□ -1.33
RPT4P53549 PDR18YNR070W 4002 nt6.73□□□□□ -1.33
RPT4P53549 PRP2YNR011C 2631 nt6.72□□□□□ -1.33
RPT4P53549 PRM10YJL108C 1152 nt6.72□□□□□ -1.33
RPT4P53549 HSM3YBR272C 1443 nt6.72□□□□□ -1.33
RPT4P53549 ASN2YGR124W 1719 nt6.72□□□□□ -1.33
RPT4P53549 LYS12YIL094C 1116 nt6.71□□□□□ -1.34
RPT4P53549 CSG2YBR036C 1233 nt6.71□□□□□ -1.34
RPT4P53549 YML082WYML082W 1950 nt6.7□□□□□ -1.34
RPT4P53549 YGL194C-AYGL194C-A 243 nt6.7□□□□□ -1.34
RPT4P53549 PGU1YJR153W 1086 nt6.7□□□□□ -1.34
RPT4P53549 YLR118CYLR118C 684 nt6.7□□□□□ -1.34
RPT4P53549 YPL062WYPL062W 405 nt6.7□□□□□ -1.34
RPT4P53549 YBR124WYBR124W 360 nt6.7□□□□□ -1.34
RPT4P53549 HIS7YBR248C 1659 nt6.7□□□□□ -1.34
RPT4P53549 YCR097W-AYCR097W-A 267 nt6.69□□□□□ -1.34
RPT4P53549 MRPL1YDR116C 858 nt6.69□□□□□ -1.34
RPT4P53549 HSX1tR(CCU)J 72 nt6.69□□□□□ -1.34
RPT4P53549 RRN10YBL025W 438 nt6.69□□□□□ -1.34
RPT4P53549 YNR040WYNR040W 771 nt6.69□□□□□ -1.34
RPT4P53549 RTT106YNL206C 1368 nt6.69□□□□□ -1.34
RPT4P53549 RAD3YER171W 2337 nt6.68□□□□□ -1.34
RPT4P53549 TIM54YJL054W 1437 nt6.68□□□□□ -1.34
RPT4P53549 YEN1YER041W 2280 nt6.68□□□□□ -1.34
RPT4P53549 SFC1YJR095W 969 nt6.68□□□□□ -1.34
RPT4P53549 YJU3YKL094W 942 nt6.68□□□□□ -1.34
RPT4P53549 YLR283WYLR283W 945 nt6.68□□□□□ -1.34
RPT4P53549 YML083CYML083C 1257 nt6.68□□□□□ -1.34
RPT4P53549 GAA1YLR088W 1845 nt6.68□□□□□ -1.34
RPT4P53549 YOS9YDR057W 1629 nt6.68□□□□□ -1.34
RPT4P53549 NPA3YJR072C 1158 nt6.67□□□□□ -1.34
RPT4P53549 YJR115WYJR115W 510 nt6.67□□□□□ -1.34
RPT4P53549 PKC1YBL105C 3456 nt6.66□□□□□ -1.34
RPT4P53549 HAP2YGL237C 798 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)CtN(GUU)C 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)FtN(GUU)F 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)GtN(GUU)G 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)KtN(GUU)K 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)LtN(GUU)L 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)N1tN(GUU)N1 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)N2tN(GUU)N2 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)O1tN(GUU)O1 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)O2tN(GUU)O2 74 nt6.66□□□□□ -1.34
RPT4P53549 tN(GUU)PtN(GUU)P 74 nt6.66□□□□□ -1.34
RPT4P53549 YGR182CYGR182C 354 nt6.66□□□□□ -1.34
RPT4P53549 CTF8YHR191C 402 nt6.66□□□□□ -1.34
RPT4P53549 SUP2tY(GUA)D 75 nt6.66□□□□□ -1.34
RPT4P53549 SUP11tY(GUA)F1 75 nt6.66□□□□□ -1.34
RPT4P53549 SUP6tY(GUA)F2 75 nt6.66□□□□□ -1.34
RPT4P53549 SUP7tY(GUA)J1 75 nt6.66□□□□□ -1.34
RPT4P53549 SUP4tY(GUA)J2 75 nt6.66□□□□□ -1.34
RPT4P53549 SUP5tY(GUA)M1 75 nt6.66□□□□□ -1.34
RPT4P53549 SUP8tY(GUA)M2 75 nt6.66□□□□□ -1.34
RPT4P53549 SUP3tY(GUA)O 75 nt6.66□□□□□ -1.34
RPT4P53549 NUD1YOR373W 2556 nt6.65□□□□□ -1.34
RPT4P53549 PGK1YCR012W 1251 nt6.65□□□□□ -1.34
RPT4P53549 RME1YGR044C 903 nt6.65□□□□□ -1.34
RPT4P53549 YKL151CYKL151C 1014 nt6.65□□□□□ -1.34
RPT4P53549 YTH1YPR107C 627 nt6.65□□□□□ -1.34
RPT4P53549 NOB1YOR056C 1380 nt6.65□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 34.2 ms