Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 PTM1YKL039W 1572 nt5.33□□□□□ -1.56
CDC43P18898 KCH1YJR054W 1494 nt5.33□□□□□ -1.56
CDC43P18898 ERS1YCR075C 783 nt5.33□□□□□ -1.56
CDC43P18898 PEX19YDL065C 1029 nt5.33□□□□□ -1.56
CDC43P18898 YDR249CYDR249C 1122 nt5.33□□□□□ -1.56
CDC43P18898 IRC6YFR043C 714 nt5.33□□□□□ -1.56
CDC43P18898 DST1YGL043W 930 nt5.33□□□□□ -1.56
CDC43P18898 YGL218WYGL218W 651 nt5.33□□□□□ -1.56
CDC43P18898 MRPL15YLR312W-A 762 nt5.33□□□□□ -1.56
CDC43P18898 YMR007WYMR007W 381 nt5.33□□□□□ -1.56
CDC43P18898 MNN9YPL050C 1188 nt5.33□□□□□ -1.56
CDC43P18898 MRL1YPR079W 1146 nt5.33□□□□□ -1.56
CDC43P18898 ERO1YML130C 1692 nt5.33□□□□□ -1.56
CDC43P18898 KTR5YNL029C 1569 nt5.33□□□□□ -1.56
CDC43P18898 YPR204WYPR204W 3099 nt5.32□□□□□ -1.56
CDC43P18898 YCR100CYCR100C 951 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)DtA(AGC)D 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)FtA(AGC)F 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)GtA(AGC)G 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)HtA(AGC)H 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)JtA(AGC)J 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)K1tA(AGC)K1 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)K2tA(AGC)K2 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)LtA(AGC)L 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)M1tA(AGC)M1 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)M2tA(AGC)M2 73 nt5.32□□□□□ -1.56
CDC43P18898 tA(AGC)PtA(AGC)P 73 nt5.32□□□□□ -1.56
CDC43P18898 YFL012WYFL012W 447 nt5.32□□□□□ -1.56
CDC43P18898 HPM1YIL110W 1134 nt5.32□□□□□ -1.56
CDC43P18898 YML094C-AYML094C-A 402 nt5.32□□□□□ -1.56
CDC43P18898 YNR014WYNR014W 639 nt5.32□□□□□ -1.56
CDC43P18898 SRL4YPL033C 846 nt5.32□□□□□ -1.56
CDC43P18898 YAH1YPL252C 519 nt5.32□□□□□ -1.56
CDC43P18898 PBP2YBR233W 1242 nt5.32□□□□□ -1.56
CDC43P18898 HBN1YCL026C-B 582 nt5.32□□□□□ -1.56
CDC43P18898 YDR029WYDR029W 315 nt5.31□□□□□ -1.56
CDC43P18898 YDR327WYDR327W 327 nt5.31□□□□□ -1.56
CDC43P18898 POP6YGR030C 477 nt5.31□□□□□ -1.56
CDC43P18898 ERG25YGR060W 930 nt5.31□□□□□ -1.56
CDC43P18898 SKI6YGR195W 741 nt5.31□□□□□ -1.56
CDC43P18898 SPC34YKR037C 888 nt5.31□□□□□ -1.56
CDC43P18898 YAL066WYAL066W 309 nt5.31□□□□□ -1.56
CDC43P18898 IBD2YNL164C 1056 nt5.31□□□□□ -1.56
CDC43P18898 IES2YNL215W 963 nt5.31□□□□□ -1.56
CDC43P18898 BXI1YNL305C 894 nt5.31□□□□□ -1.56
CDC43P18898 IPL1YPL209C 1104 nt5.31□□□□□ -1.56
CDC43P18898 VHT1YGR065C 1782 nt5.31□□□□□ -1.56
CDC43P18898 JHD1YER051W 1479 nt5.31□□□□□ -1.56
CDC43P18898 MND2YIR025W 1107 nt5.3□□□□□ -1.56
CDC43P18898 PRE3YJL001W 648 nt5.3□□□□□ -1.56
CDC43P18898 YJL171CYJL171C 1191 nt5.3□□□□□ -1.56
CDC43P18898 DRE2YKR071C 1047 nt5.3□□□□□ -1.56
CDC43P18898 YLR271WYLR271W 825 nt5.3□□□□□ -1.56
CDC43P18898 MTF1YMR228W 1026 nt5.3□□□□□ -1.56
CDC43P18898 VPS36YLR417W 1701 nt5.3□□□□□ -1.56
CDC43P18898 CRF1YDR223W 1404 nt5.3□□□□□ -1.56
CDC43P18898 YDR034C-CYDR034C-C 1317 nt5.29□□□□□ -1.56
CDC43P18898 YLR410W-AYLR410W-A 1317 nt5.29□□□□□ -1.56
CDC43P18898 AMN1YBR158W 1650 nt5.29□□□□□ -1.56
CDC43P18898 GYP8YFL027C 1494 nt5.29□□□□□ -1.56
CDC43P18898 EDC2YER035W 438 nt5.29□□□□□ -1.56
CDC43P18898 YJU2YKL095W 837 nt5.29□□□□□ -1.56
CDC43P18898 YLR202CYLR202C 327 nt5.29□□□□□ -1.56
CDC43P18898 YPL068CYPL068C 882 nt5.29□□□□□ -1.56
CDC43P18898 ECM8YBR076W 1065 nt5.29□□□□□ -1.56
CDC43P18898 MHP1YJL042W 4197 nt5.29□□□□□ -1.56
CDC43P18898 YPK3YBR028C 1578 nt5.29□□□□□ -1.56
CDC43P18898 GUS1YGL245W 2127 nt5.29□□□□□ -1.56
CDC43P18898 COR1YBL045C 1374 nt5.29□□□□□ -1.56
CDC43P18898 OCA4YCR095C 1089 nt5.28□□□□□ -1.56
CDC43P18898 LUC7YDL087C 786 nt5.28□□□□□ -1.56
CDC43P18898 PPH22YDL188C 1134 nt5.28□□□□□ -1.56
CDC43P18898 RRG1YDR065W 1098 nt5.28□□□□□ -1.56
CDC43P18898 GIC2YDR309C 1152 nt5.28□□□□□ -1.56
CDC43P18898 YGL258W-AYGL258W-A 234 nt5.28□□□□□ -1.56
CDC43P18898 HGH1YGR187C 1185 nt5.28□□□□□ -1.56
CDC43P18898 KRE9YJL174W 831 nt5.28□□□□□ -1.56
CDC43P18898 CPR6YLR216C 1116 nt5.28□□□□□ -1.56
CDC43P18898 TOM40YMR203W 1164 nt5.28□□□□□ -1.56
CDC43P18898 YPL191CYPL191C 1083 nt5.28□□□□□ -1.56
CDC43P18898 CBP6YBR120C 489 nt5.28□□□□□ -1.56
CDC43P18898 SHE9YDR393W 1371 nt5.28□□□□□ -1.56
CDC43P18898 HOG1YLR113W 1308 nt5.27□□□□□ -1.57
CDC43P18898 YDL114WYDL114W 927 nt5.27□□□□□ -1.57
CDC43P18898 IRC7YFR055W 1023 nt5.27□□□□□ -1.57
CDC43P18898 CLC1YGR167W 702 nt5.27□□□□□ -1.57
CDC43P18898 NVJ1YHR195W 966 nt5.27□□□□□ -1.57
CDC43P18898 EST3YIL009C-A 546 nt5.27□□□□□ -1.57
CDC43P18898 ERG20YJL167W 1059 nt5.27□□□□□ -1.57
CDC43P18898 YKL091CYKL091C 933 nt5.27□□□□□ -1.57
CDC43P18898 HRT3YLR097C 1035 nt5.27□□□□□ -1.57
CDC43P18898 PEX13YLR191W 1161 nt5.27□□□□□ -1.57
CDC43P18898 RUF5-1RUF5-1 710 nt5.27□□□□□ -1.57
CDC43P18898 RUF5-2RUF5-2 710 nt5.27□□□□□ -1.57
CDC43P18898 SMA1YPL027W 738 nt5.27□□□□□ -1.57
CDC43P18898 FET4YMR319C 1659 nt5.27□□□□□ -1.57
CDC43P18898 RMD9YGL107C 1941 nt5.27□□□□□ -1.57
CDC43P18898 PET494YNR045W 1470 nt5.26□□□□□ -1.57
CDC43P18898 NMA2YGR010W 1188 nt5.26□□□□□ -1.57
CDC43P18898 YJL064WYJL064W 396 nt5.26□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 81.9 ms