Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	PSP2	YML017W	1782 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	RRP43	YCR035C	1185 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	snR82	snR82	268 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	DUO1	YGL061C	744 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	SCEI	Q0160	708 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	YSC83	YHR017W	1158 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	BLS1	YLR408C	369 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	YML090W	YML090W	387 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	RDL2	YOR286W	450 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	GLN3	YER040W	2193 nt		7.1	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	HNM1	YGL077C	1692 nt		7.09	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	FCY22	YER060W-A	1593 nt		7.09	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	TCB1	YOR086C	3561 nt		7.09	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	HYM1	YKL189W	1200 nt		7.09	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	YLL047W	YLL047W	384 nt		7.09	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	END3	YNL084C	1050 nt		7.09	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	IBD2	YNL164C	1056 nt		7.09	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	VPS68	YOL129W	555 nt		7.09	□□□□□ -1.27
TY4B-P	A0A0B7P3V8	EFT2	YDR385W	2529 nt		7.08	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	EFT1	YOR133W	2529 nt		7.08	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	EMW1	YNL313C	2715 nt		7.08	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	SAY1	YGR263C	1275 nt		7.08	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YJL043W	YJL043W	774 nt		7.08	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	AVT4	YNL101W	2142 nt		7.08	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YAH1	YPL252C	519 nt		7.08	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YLH47	YPR125W	1365 nt		7.08	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YDR220C	YDR220C	294 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	HHY1	YEL059W	309 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	GTS1	YGL181W	1191 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	TIF2	YJL138C	1188 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	TIF1	YKR059W	1188 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	JNM1	YMR294W	1122 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	CPT1	YNL130C	1182 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YPL136W	YPL136W	369 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	PNS1	YOR161C	1620 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	CHL4	YDR254W	1377 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	PRP46	YPL151C	1356 nt		7.07	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	LAG2	YOL025W	1983 nt		7.06	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	ERJ5	YFR041C	888 nt		7.06	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	PAC10	YGR078C	600 nt		7.06	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YIR020W-A	YIR020W-A	243 nt		7.06	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YJL047C-A	YJL047C-A	135 nt		7.06	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	CCP1	YKR066C	1086 nt		7.06	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	MFA2	YNL145W	117 nt		7.06	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	CDC23	YHR166C	1881 nt		7.06	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	CEF1	YMR213W	1773 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	IMA2	YOL157C	1770 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YIL055C	YIL055C	1884 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YFT2	YDR319C	825 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YDR327W	YDR327W	327 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	HAC1	YFL031W	717 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YGL218W	YGL218W	651 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	LST7	YGR057C	729 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	GTO1	YGR154C	1071 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YIL086C	YIL086C	309 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	MPM1	YJL066C	759 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	SPC42	YKL042W	1092 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YLR407W	YLR407W	687 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	RUF5-1	RUF5-1	710 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	RUF5-2	RUF5-2	710 nt		7.05	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	ENP1	YBR247C	1452 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	PRP9	YDL030W	1593 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	NUP53	YMR153W	1428 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	GRX6	YDL010W	696 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	PSA1	YDL055C	1086 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YDR476C	YDR476C	675 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	MRPL6	YHR147C	645 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	CBT1	YKL208W	816 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YPT10	YBR264C	600 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	PPT1	YGR123C	1542 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	SRP101	YDR292C	1866 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	ARH1	YDR376W	1482 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	HFI1	YPL254W	1467 nt		7.04	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YMR027W	YMR027W	1413 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	ACS1	YAL054C	2142 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	IMG2	YCR071C	441 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YAL064W	YAL064W	285 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YLL017W	YLL017W	312 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	TLG2	YOL018C	1194 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	YOL162W	YOL162W	648 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	ASN1	YPR145W	1719 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	IVY1	YDR229W	1362 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	NFI1	YOR156C	2181 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	SPS1	YDR523C	1473 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	MIF2	YKL089W	1650 nt		7.03	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	RRP14	YKL082C	1305 nt		7.02	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	MSS51	YLR203C	1311 nt		7.02	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	ERG24	YNL280C	1317 nt		7.02	□□□□□ -1.28
TY4B-P	A0A0B7P3V8	BDS1	YOL164W	1941 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	PCL2	YDL127W	927 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	YDR008C	YDR008C	351 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	tL(UAA)B1	tL(UAA)B1	84 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	tL(UAA)B2	tL(UAA)B2	84 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	tL(UAA)D	tL(UAA)D	84 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	SUP51	tL(UAA)J	84 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	tL(UAA)K	tL(UAA)K	84 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	tL(UAA)L	tL(UAA)L	84 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	tL(UAA)N	tL(UAA)N	84 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	YHR112C	YHR112C	1137 nt		7.02	□□□□□ -1.29
TY4B-P	A0A0B7P3V8	YIR021W-A	YIR021W-A	213 nt		7.02	□□□□□ -1.29

Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms