Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 AIM24YJR080C 1185 nt5.66□□□□□ -1.5
CUP9P41817 ENV7YPL236C 1095 nt5.66□□□□□ -1.5
CUP9P41817 SKS1YPL026C 1509 nt5.65□□□□□ -1.5
CUP9P41817 HEM2YGL040C 1029 nt5.65□□□□□ -1.5
CUP9P41817 ECM14YHR132C 1293 nt5.65□□□□□ -1.5
CUP9P41817 SQT1YIR012W 1296 nt5.65□□□□□ -1.5
CUP9P41817 YJR107WYJR107W 987 nt5.65□□□□□ -1.5
CUP9P41817 FBA1YKL060C 1080 nt5.65□□□□□ -1.5
CUP9P41817 SUR7YML052W 909 nt5.65□□□□□ -1.5
CUP9P41817 SNN1YNL086W 309 nt5.65□□□□□ -1.5
CUP9P41817 CAF40YNL288W 1122 nt5.65□□□□□ -1.5
CUP9P41817 AMD2YDR242W 1650 nt5.64□□□□□ -1.51
CUP9P41817 GCV3YAL044C 513 nt5.64□□□□□ -1.51
CUP9P41817 PEX13YLR191W 1161 nt5.64□□□□□ -1.51
CUP9P41817 YPR160C-AYPR160C-A 285 nt5.64□□□□□ -1.51
CUP9P41817 THI2YBR240C 1353 nt5.64□□□□□ -1.51
CUP9P41817 ECM30YLR436C 3825 nt5.63□□□□□ -1.51
CUP9P41817 ICL1YER065C 1674 nt5.63□□□□□ -1.51
CUP9P41817 Q0010Q0010 387 nt5.63□□□□□ -1.51
CUP9P41817 GPA2YER020W 1350 nt5.63□□□□□ -1.51
CUP9P41817 RSP5YER125W 2430 nt5.63□□□□□ -1.51
CUP9P41817 RPP1YHR062C 882 nt5.62□□□□□ -1.51
CUP9P41817 CTF8YHR191C 402 nt5.62□□□□□ -1.51
CUP9P41817 LCB3YJL134W 1230 nt5.62□□□□□ -1.51
CUP9P41817 RPS5YJR123W 678 nt5.62□□□□□ -1.51
CUP9P41817 YHR131CYHR131C 2553 nt5.61□□□□□ -1.51
CUP9P41817 SUF5tG(CCC)O 72 nt5.61□□□□□ -1.51
CUP9P41817 ILV1YER086W 1731 nt5.61□□□□□ -1.51
CUP9P41817 ECM19YLR390W 339 nt5.61□□□□□ -1.51
CUP9P41817 RKI1YOR095C 777 nt5.61□□□□□ -1.51
CUP9P41817 PDR18YNR070W 4002 nt5.61□□□□□ -1.51
CUP9P41817 YDL144CYDL144C 1071 nt5.6□□□□□ -1.51
CUP9P41817 EGD2YHR193C 525 nt5.6□□□□□ -1.51
CUP9P41817 PMT3YOR321W 2262 nt5.6□□□□□ -1.51
CUP9P41817 NHA1YLR138W 2958 nt5.6□□□□□ -1.51
CUP9P41817 MCH1YDL054C 1461 nt5.59□□□□□ -1.51
CUP9P41817 YML133CYML133C 4125 nt5.59□□□□□ -1.51
CUP9P41817 LDS1YAL018C 978 nt5.59□□□□□ -1.51
CUP9P41817 POP5YAL033W 522 nt5.59□□□□□ -1.51
CUP9P41817 JNM1YMR294W 1122 nt5.59□□□□□ -1.51
CUP9P41817 ARG81YML099C 2643 nt5.58□□□□□ -1.52
CUP9P41817 YDL129WYDL129W 876 nt5.58□□□□□ -1.52
CUP9P41817 YDL172CYDL172C 480 nt5.58□□□□□ -1.52
CUP9P41817 ERP5YHR110W 639 nt5.58□□□□□ -1.52
CUP9P41817 YLR123CYLR123C 330 nt5.58□□□□□ -1.52
CUP9P41817 COX5AYNL052W 462 nt5.58□□□□□ -1.52
CUP9P41817 KTR1YOR099W 1182 nt5.58□□□□□ -1.52
CUP9P41817 FRE5YOR384W 2085 nt5.58□□□□□ -1.52
CUP9P41817 SKY1YMR216C 2229 nt5.58□□□□□ -1.52
CUP9P41817 TPK1YJL164C 1194 nt5.57□□□□□ -1.52
CUP9P41817 YLR126CYLR126C 756 nt5.57□□□□□ -1.52
CUP9P41817 YLR312CYLR312C 1197 nt5.57□□□□□ -1.52
CUP9P41817 CCC2YDR270W 3015 nt5.56□□□□□ -1.52
CUP9P41817 EXG1YLR300W 1347 nt5.56□□□□□ -1.52
CUP9P41817 GEF1YJR040W 2340 nt5.56□□□□□ -1.52
CUP9P41817 SYF2YGR129W 648 nt5.56□□□□□ -1.52
CUP9P41817 QCR8YJL166W 285 nt5.56□□□□□ -1.52
CUP9P41817 HMS2YJR147W 1077 nt5.56□□□□□ -1.52
CUP9P41817 SHP1YBL058W 1272 nt5.56□□□□□ -1.52
CUP9P41817 YNL017CYNL017C 339 nt5.56□□□□□ -1.52
CUP9P41817 YBR056C-BYBR056C-B 159 nt5.56□□□□□ -1.52
CUP9P41817 YMC1YPR058W 924 nt5.56□□□□□ -1.52
CUP9P41817 DAL4YIR028W 1908 nt5.56□□□□□ -1.52
CUP9P41817 UTP4YDR324C 2331 nt5.56□□□□□ -1.52
CUP9P41817 SES1YDR023W 1389 nt5.55□□□□□ -1.52
CUP9P41817 UTR2YEL040W 1404 nt5.55□□□□□ -1.52
CUP9P41817 PRS2YER099C 957 nt5.54□□□□□ -1.52
CUP9P41817 ASK1YKL052C 879 nt5.54□□□□□ -1.52
CUP9P41817 IES2YNL215W 963 nt5.54□□□□□ -1.52
CUP9P41817 YPL102CYPL102C 303 nt5.54□□□□□ -1.52
CUP9P41817 VMA2YBR127C 1554 nt5.54□□□□□ -1.52
CUP9P41817 UBP13YBL067C 2244 nt5.54□□□□□ -1.52
CUP9P41817 MNS1YJR131W 1650 nt5.53□□□□□ -1.52
CUP9P41817 ADE12YNL220W 1302 nt5.53□□□□□ -1.52
CUP9P41817 CLN1YMR199W 1641 nt5.53□□□□□ -1.52
CUP9P41817 RRS1YOR294W 612 nt5.53□□□□□ -1.52
CUP9P41817 MRPS16YPL013C 366 nt5.53□□□□□ -1.52
CUP9P41817 NOG2YNR053C 1461 nt5.52□□□□□ -1.53
CUP9P41817 MTF2YDL044C 1323 nt5.52□□□□□ -1.53
CUP9P41817 GLN3YER040W 2193 nt5.52□□□□□ -1.53
CUP9P41817 PHO3YBR092C 1404 nt5.52□□□□□ -1.53
CUP9P41817 YDR034W-BYDR034W-B 156 nt5.52□□□□□ -1.53
CUP9P41817 QCR6YFR033C 444 nt5.52□□□□□ -1.53
CUP9P41817 CSL4YNL232W 879 nt5.52□□□□□ -1.53
CUP9P41817 PRI2YKL045W 1587 nt5.51□□□□□ -1.53
CUP9P41817 LEU5YHR002W 1074 nt5.51□□□□□ -1.53
CUP9P41817 YNL042W-BYNL042W-B 258 nt5.51□□□□□ -1.53
CUP9P41817 YNL200CYNL200C 741 nt5.51□□□□□ -1.53
CUP9P41817 TKL2YBR117C 2046 nt5.5□□□□□ -1.53
CUP9P41817 snR82snR82 268 nt5.5□□□□□ -1.53
CUP9P41817 UGX2YDL169C 672 nt5.5□□□□□ -1.53
CUP9P41817 DFM1YDR411C 1026 nt5.5□□□□□ -1.53
CUP9P41817 YEL068CYEL068C 333 nt5.5□□□□□ -1.53
CUP9P41817 CDC34YDR054C 888 nt5.49□□□□□ -1.53
CUP9P41817 FPR2YDR519W 408 nt5.49□□□□□ -1.53
CUP9P41817 BIM1YER016W 1035 nt5.49□□□□□ -1.53
CUP9P41817 TSA1YML028W 591 nt5.49□□□□□ -1.53
CUP9P41817 AIM33YML087C 939 nt5.49□□□□□ -1.53
CUP9P41817 MRPS5YBR251W 924 nt5.49□□□□□ -1.53
CUP9P41817 RGT2YDL138W 2292 nt5.49□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 43 ms