Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 RPS5YJR123W 678 nt5.98□□□□□ -1.45
RPL40BP0CH09 GLC8YMR311C 690 nt5.98□□□□□ -1.45
RPL40BP0CH09 SNO4YMR322C 714 nt5.98□□□□□ -1.45
RPL40BP0CH09 HSP33YOR391C 714 nt5.98□□□□□ -1.45
RPL40BP0CH09 CAR1YPL111W 1002 nt5.98□□□□□ -1.45
RPL40BP0CH09 HSP32YPL280W 714 nt5.98□□□□□ -1.45
RPL40BP0CH09 ECM27YJR106W 2178 nt5.97□□□□□ -1.45
RPL40BP0CH09 MLC1YGL106W 450 nt5.97□□□□□ -1.45
RPL40BP0CH09 YJR084WYJR084W 1272 nt5.97□□□□□ -1.45
RPL40BP0CH09 RPL31BYLR406C 342 nt5.96□□□□□ -1.46
RPL40BP0CH09 RPL5YPL131W 894 nt5.96□□□□□ -1.46
RPL40BP0CH09 TUF1YOR187W 1314 nt5.96□□□□□ -1.46
RPL40BP0CH09 PAC2YER007W 1557 nt5.95□□□□□ -1.46
RPL40BP0CH09 MRPL22YNL177C 930 nt5.95□□□□□ -1.46
RPL40BP0CH09 ARG1YOL058W 1263 nt5.95□□□□□ -1.46
RPL40BP0CH09 CTA1YDR256C 1548 nt5.94□□□□□ -1.46
RPL40BP0CH09 MAS1YLR163C 1389 nt5.94□□□□□ -1.46
RPL40BP0CH09 MAK31YCR020C-A 267 nt5.94□□□□□ -1.46
RPL40BP0CH09 YDL177CYDL177C 513 nt5.94□□□□□ -1.46
RPL40BP0CH09 TPK1YJL164C 1194 nt5.94□□□□□ -1.46
RPL40BP0CH09 TEA1YOR337W 2280 nt5.94□□□□□ -1.46
RPL40BP0CH09 HPT1YDR399W 666 nt5.93□□□□□ -1.46
RPL40BP0CH09 QCR6YFR033C 444 nt5.93□□□□□ -1.46
RPL40BP0CH09 YCL041CYCL041C 495 nt5.93□□□□□ -1.46
RPL40BP0CH09 RGD2YFL047W 2145 nt5.93□□□□□ -1.46
RPL40BP0CH09 COX10YPL172C 1389 nt5.93□□□□□ -1.46
RPL40BP0CH09 IPK1YDR315C 846 nt5.92□□□□□ -1.46
RPL40BP0CH09 LYS1YIR034C 1122 nt5.92□□□□□ -1.46
RPL40BP0CH09 PRM10YJL108C 1152 nt5.92□□□□□ -1.46
RPL40BP0CH09 AIM33YML087C 939 nt5.92□□□□□ -1.46
RPL40BP0CH09 CAF40YNL288W 1122 nt5.92□□□□□ -1.46
RPL40BP0CH09 YMR034CYMR034C 1305 nt5.92□□□□□ -1.46
RPL40BP0CH09 PEX31YGR004W 1389 nt5.92□□□□□ -1.46
RPL40BP0CH09 GUT1YHL032C 2130 nt5.92□□□□□ -1.46
RPL40BP0CH09 DYS1YHR068W 1164 nt5.91□□□□□ -1.46
RPL40BP0CH09 KNH1YDL049C 807 nt5.9□□□□□ -1.46
RPL40BP0CH09 COX9YDL067C 180 nt5.9□□□□□ -1.46
RPL40BP0CH09 PTC4YBR125C 1182 nt5.9□□□□□ -1.46
RPL40BP0CH09 ICL1YER065C 1674 nt5.9□□□□□ -1.47
RPL40BP0CH09 COT1YOR316C 1320 nt5.9□□□□□ -1.47
RPL40BP0CH09 KNS1YLL019C 2214 nt5.9□□□□□ -1.47
RPL40BP0CH09 GCN3YKR026C 918 nt5.89□□□□□ -1.47
RPL40BP0CH09 YLR283WYLR283W 945 nt5.89□□□□□ -1.47
RPL40BP0CH09 RUF23RUF23 254 nt5.89□□□□□ -1.47
RPL40BP0CH09 ISC1YER019W 1434 nt5.89□□□□□ -1.47
RPL40BP0CH09 COQ1YBR003W 1422 nt5.89□□□□□ -1.47
RPL40BP0CH09 VMA2YBR127C 1554 nt5.89□□□□□ -1.47
RPL40BP0CH09 TOS2YGR221C 1869 nt5.88□□□□□ -1.47
RPL40BP0CH09 YFL013W-AYFL013W-A 804 nt5.88□□□□□ -1.47
RPL40BP0CH09 MRP17YKL003C 396 nt5.88□□□□□ -1.47
RPL40BP0CH09 GAT3YLR013W 426 nt5.88□□□□□ -1.47
RPL40BP0CH09 YNR075C-AYNR075C-A 93 nt5.88□□□□□ -1.47
RPL40BP0CH09 POX1YGL205W 2247 nt5.88□□□□□ -1.47
RPL40BP0CH09 NOG2YNR053C 1461 nt5.88□□□□□ -1.47
RPL40BP0CH09 PUF3YLL013C 2640 nt5.88□□□□□ -1.47
RPL40BP0CH09 STF1YDL130W-A 261 nt5.87□□□□□ -1.47
RPL40BP0CH09 FAL1YDR021W 1200 nt5.87□□□□□ -1.47
RPL40BP0CH09 YGR022CYGR022C 330 nt5.87□□□□□ -1.47
RPL40BP0CH09 YUR1YJL139C 1287 nt5.87□□□□□ -1.47
RPL40BP0CH09 JNM1YMR294W 1122 nt5.87□□□□□ -1.47
RPL40BP0CH09 YNL296WYNL296W 315 nt5.87□□□□□ -1.47
RPL40BP0CH09 AVT4YNL101W 2142 nt5.87□□□□□ -1.47
RPL40BP0CH09 ARE2YNR019W 1929 nt5.86□□□□□ -1.47
RPL40BP0CH09 CIR2YOR356W 1896 nt5.86□□□□□ -1.47
RPL40BP0CH09 YET3YDL072C 612 nt5.86□□□□□ -1.47
RPL40BP0CH09 RPP1YHR062C 882 nt5.86□□□□□ -1.47
RPL40BP0CH09 GTO3YMR251W 1101 nt5.86□□□□□ -1.47
RPL40BP0CH09 IME2YJL106W 1938 nt5.86□□□□□ -1.47
RPL40BP0CH09 CEF1YMR213W 1773 nt5.85□□□□□ -1.47
RPL40BP0CH09 YEL053W-AYEL053W-A 348 nt5.85□□□□□ -1.47
RPL40BP0CH09 YJR107WYJR107W 987 nt5.85□□□□□ -1.47
RPL40BP0CH09 TKL2YBR117C 2046 nt5.85□□□□□ -1.47
RPL40BP0CH09 YPR204WYPR204W 3099 nt5.85□□□□□ -1.47
RPL40BP0CH09 UTP4YDR324C 2331 nt5.85□□□□□ -1.47
RPL40BP0CH09 YDL129WYDL129W 876 nt5.84□□□□□ -1.47
RPL40BP0CH09 TRS31YDR472W 852 nt5.84□□□□□ -1.47
RPL40BP0CH09 YKR032WYKR032W 315 nt5.84□□□□□ -1.47
RPL40BP0CH09 GDT1YBR187W 843 nt5.84□□□□□ -1.47
RPL40BP0CH09 PXL1YKR090W 2121 nt5.84□□□□□ -1.47
RPL40BP0CH09 YGL036WYGL036W 2730 nt5.83□□□□□ -1.48
RPL40BP0CH09 EEB1YPL095C 1371 nt5.83□□□□□ -1.48
RPL40BP0CH09 RPN6YDL097C 1305 nt5.83□□□□□ -1.48
RPL40BP0CH09 HEL1YKR017C 1656 nt5.83□□□□□ -1.48
RPL40BP0CH09 UTR4YEL038W 684 nt5.83□□□□□ -1.48
RPL40BP0CH09 ARG81YML099C 2643 nt5.83□□□□□ -1.48
RPL40BP0CH09 SES1YDR023W 1389 nt5.82□□□□□ -1.48
RPL40BP0CH09 YDL022C-AYDL022C-A 249 nt5.82□□□□□ -1.48
RPL40BP0CH09 PAD1YDR538W 729 nt5.82□□□□□ -1.48
RPL40BP0CH09 MRK1YDL079C 1506 nt5.81□□□□□ -1.48
RPL40BP0CH09 SUF5tG(CCC)O 72 nt5.81□□□□□ -1.48
RPL40BP0CH09 PPM2YOL141W 2088 nt5.81□□□□□ -1.48
RPL40BP0CH09 MIP1YOR330C 3765 nt5.81□□□□□ -1.48
RPL40BP0CH09 COR1YBL045C 1374 nt5.8□□□□□ -1.48
RPL40BP0CH09 PPT1YGR123C 1542 nt5.8□□□□□ -1.48
RPL40BP0CH09 YJR015WYJR015W 1533 nt5.8□□□□□ -1.48
RPL40BP0CH09 YML012C-AYML012C-A 378 nt5.8□□□□□ -1.48
RPL40BP0CH09 COX5AYNL052W 462 nt5.8□□□□□ -1.48
RPL40BP0CH09 YPL257WYPL257W 582 nt5.8□□□□□ -1.48
RPL40BP0CH09 ATG12YBR217W 561 nt5.8□□□□□ -1.48
RPL40BP0CH09 YDR415CYDR415C 1125 nt5.79□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms