Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC114878.2-201ENST00000604863 1251 ntBASIC14.84□□□□□ -0.03
KRTAP3-3Q9BYR6 AC018754.1-201ENST00000607486 925 ntBASIC14.84□□□□□ -0.03
KRTAP3-3Q9BYR6 AC008592.5-201ENST00000607856 547 ntBASIC14.84□□□□□ -0.03
KRTAP3-3Q9BYR6 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 USP9YP14-201ENST00000430663 563 ntBASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 MIR4760-201ENST00000585040 80 ntBASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 AC005520.3-201ENST00000602874 370 ntBASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 MTND5P31-201ENST00000419366 1374 ntBASIC14.83□□□□□ -0.04
KRTAP3-3Q9BYR6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 AC012213.3-201ENST00000577199 777 ntBASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC14.82□□□□□ -0.04
KRTAP3-3Q9BYR6 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRTAP3-3Q9BYR6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 LINC01198-206ENST00000595532 1125 ntBASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 AL118556.2-201ENST00000614375 824 ntBASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 AC084824.3-201ENST00000620472 856 ntBASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 AC008764.6-201ENST00000595909 2069 ntBASIC14.8□□□□□ -0.04
KRTAP3-3Q9BYR6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 AL359641.1-201ENST00000412509 1558 ntBASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 AC108729.2-201ENST00000476543 840 ntBASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 AC091057.3-201ENST00000602684 733 ntBASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 AC068057.2-201ENST00000624047 895 ntBASIC14.79□□□□□ -0.04
KRTAP3-3Q9BYR6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 AL627171.1-201ENST00000618845 1308 ntBASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 RFC3P1-201ENST00000454568 682 ntBASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 BNIP3P39-201ENST00000601077 554 ntBASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 AC096947.1-201ENST00000603233 470 ntBASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 AL133507.1-201ENST00000605269 557 ntBASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 GBP1P1-201ENST00000394662 1740 ntBASIC14.78□□□□□ -0.04
KRTAP3-3Q9BYR6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KRTAP3-3Q9BYR6 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 MTND4P6-201ENST00000438297 472 ntBASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC14.77□□□□□ -0.05
KRTAP3-3Q9BYR6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC14.76□□□□□ -0.05
KRTAP3-3Q9BYR6 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC14.76□□□□□ -0.05
KRTAP3-3Q9BYR6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
KRTAP3-3Q9BYR6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC14.76□□□□□ -0.05
KRTAP3-3Q9BYR6 AC080188.3-201ENST00000624842 748 ntBASIC14.76□□□□□ -0.05
KRTAP3-3Q9BYR6 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC14.76□□□□□ -0.05
KRTAP3-3Q9BYR6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KRTAP3-3Q9BYR6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRTAP3-3Q9BYR6 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRTAP3-3Q9BYR6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC14.75□□□□□ -0.05
KRTAP3-3Q9BYR6 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC14.75□□□□□ -0.05
KRTAP3-3Q9BYR6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC14.75□□□□□ -0.05
KRTAP3-3Q9BYR6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
KRTAP3-3Q9BYR6 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRTAP3-3Q9BYR6 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRTAP3-3Q9BYR6 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC14.74□□□□□ -0.05
KRTAP3-3Q9BYR6 MTND2P31-201ENST00000512602 616 ntBASIC14.74□□□□□ -0.05
KRTAP3-3Q9BYR6 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC14.74□□□□□ -0.05
KRTAP3-3Q9BYR6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.74□□□□□ -0.05
KRTAP3-3Q9BYR6 AL049536.1-201ENST00000625043 744 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms