Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 tG(GCC)G2tG(GCC)G2 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)J1tG(GCC)J1 71 nt5.62□□□□□ -1.51
PGD1P40356 SUF23tG(GCC)J2 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)MtG(GCC)M 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)O1tG(GCC)O1 71 nt5.62□□□□□ -1.51
PGD1P40356 SUF17tG(GCC)O2 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)P1tG(GCC)P1 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)P2tG(GCC)P2 71 nt5.62□□□□□ -1.51
PGD1P40356 FBA1YKL060C 1080 nt5.62□□□□□ -1.51
PGD1P40356 MFT1YML062C 1179 nt5.62□□□□□ -1.51
PGD1P40356 IVY1YDR229W 1362 nt5.62□□□□□ -1.51
PGD1P40356 SAC6YDR129C 1929 nt5.62□□□□□ -1.51
PGD1P40356 MRPL1YDR116C 858 nt5.61□□□□□ -1.51
PGD1P40356 HSP150YJL159W 1242 nt5.61□□□□□ -1.51
PGD1P40356 OSM1YJR051W 1506 nt5.61□□□□□ -1.51
PGD1P40356 YJR154WYJR154W 1041 nt5.61□□□□□ -1.51
PGD1P40356 SEN2YLR105C 1134 nt5.61□□□□□ -1.51
PGD1P40356 CLB2YPR119W 1476 nt5.6□□□□□ -1.51
PGD1P40356 CIT2YCR005C 1383 nt5.6□□□□□ -1.51
PGD1P40356 VPS61YDR136C 573 nt5.6□□□□□ -1.51
PGD1P40356 YSC83YHR017W 1158 nt5.6□□□□□ -1.51
PGD1P40356 RPP1YHR062C 882 nt5.6□□□□□ -1.51
PGD1P40356 THI2YBR240C 1353 nt5.59□□□□□ -1.51
PGD1P40356 VPS5YOR069W 2028 nt5.59□□□□□ -1.51
PGD1P40356 DMA1YHR115C 1251 nt5.59□□□□□ -1.51
PGD1P40356 CBR1YIL043C 855 nt5.59□□□□□ -1.51
PGD1P40356 STS1YIR011C 960 nt5.59□□□□□ -1.51
PGD1P40356 ARA2YMR041C 1008 nt5.59□□□□□ -1.51
PGD1P40356 ERV2YPR037C 591 nt5.59□□□□□ -1.51
PGD1P40356 YEL020CYEL020C 1683 nt5.59□□□□□ -1.52
PGD1P40356 NFS1YCL017C 1494 nt5.58□□□□□ -1.52
PGD1P40356 YMR034CYMR034C 1305 nt5.58□□□□□ -1.52
PGD1P40356 SPR1YOR190W 1338 nt5.58□□□□□ -1.52
PGD1P40356 HDA1YNL021W 2121 nt5.57□□□□□ -1.52
PGD1P40356 FZF1YGL254W 900 nt5.57□□□□□ -1.52
PGD1P40356 MRPS12YNR036C 462 nt5.57□□□□□ -1.52
PGD1P40356 QNS1YHR074W 2145 nt5.57□□□□□ -1.52
PGD1P40356 YFR006WYFR006W 1608 nt5.56□□□□□ -1.52
PGD1P40356 EDE1YBL047C 4146 nt5.56□□□□□ -1.52
PGD1P40356 YIL077CYIL077C 963 nt5.56□□□□□ -1.52
PGD1P40356 SQT1YIR012W 1296 nt5.56□□□□□ -1.52
PGD1P40356 TDH1YJL052W 999 nt5.56□□□□□ -1.52
PGD1P40356 PSR2YLR019W 1194 nt5.56□□□□□ -1.52
PGD1P40356 PSP2YML017W 1782 nt5.56□□□□□ -1.52
PGD1P40356 PNS1YOR161C 1620 nt5.56□□□□□ -1.52
PGD1P40356 PTK2YJR059W 2457 nt5.55□□□□□ -1.52
PGD1P40356 LSG1YGL099W 1923 nt5.55□□□□□ -1.52
PGD1P40356 MIA40YKL195W 1212 nt5.55□□□□□ -1.52
PGD1P40356 YLR123CYLR123C 330 nt5.55□□□□□ -1.52
PGD1P40356 RIX7YLL034C 2514 nt5.55□□□□□ -1.52
PGD1P40356 AMA1YGR225W 1782 nt5.55□□□□□ -1.52
PGD1P40356 ADA2YDR448W 1305 nt5.54□□□□□ -1.52
PGD1P40356 YCP4YCR004C 744 nt5.54□□□□□ -1.52
PGD1P40356 PIL1YGR086C 1020 nt5.54□□□□□ -1.52
PGD1P40356 YMR007WYMR007W 381 nt5.54□□□□□ -1.52
PGD1P40356 CCC2YDR270W 3015 nt5.54□□□□□ -1.52
PGD1P40356 MCM6YGL201C 3054 nt5.54□□□□□ -1.52
PGD1P40356 ALD6YPL061W 1503 nt5.53□□□□□ -1.52
PGD1P40356 PRP24YMR268C 1335 nt5.53□□□□□ -1.52
PGD1P40356 CPT1YNL130C 1182 nt5.53□□□□□ -1.52
PGD1P40356 PAT1YCR077C 2391 nt5.53□□□□□ -1.52
PGD1P40356 PCS60YBR222C 1632 nt5.52□□□□□ -1.53
PGD1P40356 YFL042CYFL042C 2025 nt5.52□□□□□ -1.53
PGD1P40356 HAC1YFL031W 717 nt5.52□□□□□ -1.53
PGD1P40356 YHC3YJL059W 1227 nt5.52□□□□□ -1.53
PGD1P40356 RPL31BYLR406C 342 nt5.52□□□□□ -1.53
PGD1P40356 SPG5YMR191W 1122 nt5.52□□□□□ -1.53
PGD1P40356 YOR300WYOR300W 309 nt5.52□□□□□ -1.53
PGD1P40356 YPR123CYPR123C 435 nt5.52□□□□□ -1.53
PGD1P40356 HRB1YNL004W 1365 nt5.52□□□□□ -1.53
PGD1P40356 ELP4YPL101W 1371 nt5.52□□□□□ -1.53
PGD1P40356 SKN1YGR143W 2316 nt5.52□□□□□ -1.53
PGD1P40356 ATF1YOR377W 1578 nt5.51□□□□□ -1.53
PGD1P40356 YHR020WYHR020W 2067 nt5.51□□□□□ -1.53
PGD1P40356 STT3YGL022W 2157 nt5.51□□□□□ -1.53
PGD1P40356 DFR1YOR236W 636 nt5.51□□□□□ -1.53
PGD1P40356 MSY1YPL097W 1479 nt5.51□□□□□ -1.53
PGD1P40356 SGV1YPR161C 1974 nt5.5□□□□□ -1.53
PGD1P40356 ATG36YJL185C 882 nt5.5□□□□□ -1.53
PGD1P40356 PAM17YKR065C 594 nt5.5□□□□□ -1.53
PGD1P40356 YLR312CYLR312C 1197 nt5.5□□□□□ -1.53
PGD1P40356 YHL017WYHL017W 1599 nt5.5□□□□□ -1.53
PGD1P40356 LAT1YNL071W 1449 nt5.49□□□□□ -1.53
PGD1P40356 PGM1YKL127W 1713 nt5.49□□□□□ -1.53
PGD1P40356 NAS6YGR232W 687 nt5.49□□□□□ -1.53
PGD1P40356 MRS1YIR021W 1092 nt5.49□□□□□ -1.53
PGD1P40356 REC107YJR021C 945 nt5.49□□□□□ -1.53
PGD1P40356 RTC4YNL254C 1206 nt5.49□□□□□ -1.53
PGD1P40356 BSC4YNL269W 396 nt5.49□□□□□ -1.53
PGD1P40356 RKI1YOR095C 777 nt5.49□□□□□ -1.53
PGD1P40356 ERG10YPL028W 1197 nt5.49□□□□□ -1.53
PGD1P40356 PPM2YOL141W 2088 nt5.49□□□□□ -1.53
PGD1P40356 SUB2YDL084W 1341 nt5.48□□□□□ -1.53
PGD1P40356 GPA2YER020W 1350 nt5.48□□□□□ -1.53
PGD1P40356 RPL7AYGL076C 735 nt5.48□□□□□ -1.53
PGD1P40356 PTC7YHR076W 1032 nt5.48□□□□□ -1.53
PGD1P40356 COQ3YOL096C 939 nt5.48□□□□□ -1.53
PGD1P40356 RPL7BYPL198W 735 nt5.48□□□□□ -1.53
PGD1P40356 PEX3YDR329C 1326 nt5.48□□□□□ -1.53
PGD1P40356 VPS4YPR173C 1314 nt5.48□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 65.4 ms