Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 DPH5YLR172C 903 nt6.66□□□□□ -1.34
TDP1P38319 GDA1YEL042W 1557 nt6.65□□□□□ -1.34
TDP1P38319 HMS2YJR147W 1077 nt6.65□□□□□ -1.34
TDP1P38319 RPR1RPR1 369 nt6.65□□□□□ -1.34
TDP1P38319 RPL5YPL131W 894 nt6.65□□□□□ -1.34
TDP1P38319 ARP3YJR065C 1350 nt6.65□□□□□ -1.35
TDP1P38319 PIC2YER053C 903 nt6.64□□□□□ -1.35
TDP1P38319 HSP12YFL014W 330 nt6.64□□□□□ -1.35
TDP1P38319 YGL118CYGL118C 438 nt6.64□□□□□ -1.35
TDP1P38319 PLB2YMR006C 2121 nt6.64□□□□□ -1.35
TDP1P38319 POX1YGL205W 2247 nt6.63□□□□□ -1.35
TDP1P38319 TPK1YJL164C 1194 nt6.63□□□□□ -1.35
TDP1P38319 MPE1YKL059C 1326 nt6.63□□□□□ -1.35
TDP1P38319 SUR7YML052W 909 nt6.63□□□□□ -1.35
TDP1P38319 YMR147WYMR147W 672 nt6.63□□□□□ -1.35
TDP1P38319 APM1YPL259C 1428 nt6.63□□□□□ -1.35
TDP1P38319 BRN1YBL097W 2265 nt6.62□□□□□ -1.35
TDP1P38319 PEX31YGR004W 1389 nt6.62□□□□□ -1.35
TDP1P38319 YEL074WYEL074W 339 nt6.62□□□□□ -1.35
TDP1P38319 YML079WYML079W 606 nt6.62□□□□□ -1.35
TDP1P38319 COS10YNR075W 1125 nt6.62□□□□□ -1.35
TDP1P38319 SCO2YBR024W 906 nt6.62□□□□□ -1.35
TDP1P38319 SPG5YMR191W 1122 nt6.61□□□□□ -1.35
TDP1P38319 NAT5YOR253W 531 nt6.61□□□□□ -1.35
TDP1P38319 MOD5YOR274W 1287 nt6.61□□□□□ -1.35
TDP1P38319 CIR2YOR356W 1896 nt6.61□□□□□ -1.35
TDP1P38319 YPR204WYPR204W 3099 nt6.61□□□□□ -1.35
TDP1P38319 YEN1YER041W 2280 nt6.6□□□□□ -1.35
TDP1P38319 YFL013W-AYFL013W-A 804 nt6.6□□□□□ -1.35
TDP1P38319 DYS1YHR068W 1164 nt6.6□□□□□ -1.35
TDP1P38319 YHR145CYHR145C 357 nt6.6□□□□□ -1.35
TDP1P38319 ATP23YNR020C 813 nt6.6□□□□□ -1.35
TDP1P38319 TUB1YML085C 1344 nt6.59□□□□□ -1.35
TDP1P38319 DAL4YIR028W 1908 nt6.59□□□□□ -1.35
TDP1P38319 QCR6YFR033C 444 nt6.59□□□□□ -1.35
TDP1P38319 CTF8YHR191C 402 nt6.59□□□□□ -1.35
TDP1P38319 CBR1YIL043C 855 nt6.59□□□□□ -1.35
TDP1P38319 TIF2YJL138C 1188 nt6.59□□□□□ -1.35
TDP1P38319 REC107YJR021C 945 nt6.59□□□□□ -1.35
TDP1P38319 TIF1YKR059W 1188 nt6.59□□□□□ -1.35
TDP1P38319 YBL081WYBL081W 1107 nt6.59□□□□□ -1.35
TDP1P38319 YPR130CYPR130C 408 nt6.59□□□□□ -1.35
TDP1P38319 YBR284WYBR284W 2394 nt6.59□□□□□ -1.35
TDP1P38319 ICE2YIL090W 1476 nt6.59□□□□□ -1.36
TDP1P38319 FCY22YER060W-A 1593 nt6.58□□□□□ -1.36
TDP1P38319 PUP2YGR253C 783 nt6.58□□□□□ -1.36
TDP1P38319 NTG2YOL043C 1143 nt6.58□□□□□ -1.36
TDP1P38319 YHP1YDR451C 1062 nt6.57□□□□□ -1.36
TDP1P38319 YSC83YHR017W 1158 nt6.57□□□□□ -1.36
TDP1P38319 PIH1YHR034C 1035 nt6.57□□□□□ -1.36
TDP1P38319 LSM12YHR121W 564 nt6.57□□□□□ -1.36
TDP1P38319 RPL31BYLR406C 342 nt6.57□□□□□ -1.36
TDP1P38319 GET4YOR164C 939 nt6.57□□□□□ -1.36
TDP1P38319 NOG2YNR053C 1461 nt6.56□□□□□ -1.36
TDP1P38319 TKL2YBR117C 2046 nt6.56□□□□□ -1.36
TDP1P38319 HIS1YER055C 894 nt6.56□□□□□ -1.36
TDP1P38319 GCN3YKR026C 918 nt6.56□□□□□ -1.36
TDP1P38319 IRC11YOR013W 471 nt6.56□□□□□ -1.36
TDP1P38319 AIM41YOR215C 558 nt6.56□□□□□ -1.36
TDP1P38319 DML1YMR211W 1428 nt6.56□□□□□ -1.36
TDP1P38319 NAF1YNL124W 1479 nt6.55□□□□□ -1.36
TDP1P38319 YDL177CYDL177C 513 nt6.55□□□□□ -1.36
TDP1P38319 MRPS28YDR337W 861 nt6.55□□□□□ -1.36
TDP1P38319 PDA1YER178W 1263 nt6.55□□□□□ -1.36
TDP1P38319 YPL067CYPL067C 597 nt6.55□□□□□ -1.36
TDP1P38319 GLN3YER040W 2193 nt6.55□□□□□ -1.36
TDP1P38319 ATG23YLR431C 1362 nt6.55□□□□□ -1.36
TDP1P38319 UME1YPL139C 1383 nt6.55□□□□□ -1.36
TDP1P38319 FRE5YOR384W 2085 nt6.54□□□□□ -1.36
TDP1P38319 YDR401WYDR401W 564 nt6.53□□□□□ -1.36
TDP1P38319 FPR2YDR519W 408 nt6.53□□□□□ -1.36
TDP1P38319 ERP2YAL007C 648 nt6.53□□□□□ -1.36
TDP1P38319 YJR107WYJR107W 987 nt6.53□□□□□ -1.36
TDP1P38319 TOS6YNL300W 309 nt6.53□□□□□ -1.36
TDP1P38319 YNR005CYNR005C 405 nt6.53□□□□□ -1.36
TDP1P38319 SLD7YOR060C 774 nt6.53□□□□□ -1.36
TDP1P38319 ARG81YML099C 2643 nt6.53□□□□□ -1.36
TDP1P38319 ENP1YBR247C 1452 nt6.53□□□□□ -1.36
TDP1P38319 HXT2YMR011W 1626 nt6.52□□□□□ -1.37
TDP1P38319 REV7YIL139C 738 nt6.52□□□□□ -1.37
TDP1P38319 HTZ1YOL012C 405 nt6.52□□□□□ -1.37
TDP1P38319 YPQ1YOL092W 927 nt6.52□□□□□ -1.37
TDP1P38319 MBF1YOR298C-A 456 nt6.52□□□□□ -1.37
TDP1P38319 ATP4YPL078C 735 nt6.52□□□□□ -1.37
TDP1P38319 YCL049CYCL049C 939 nt6.52□□□□□ -1.37
TDP1P38319 APE4YHR113W 1473 nt6.52□□□□□ -1.37
TDP1P38319 CIA1YDR267C 993 nt6.51□□□□□ -1.37
TDP1P38319 PTC7YHR076W 1032 nt6.51□□□□□ -1.37
TDP1P38319 YJL144WYJL144W 315 nt6.51□□□□□ -1.37
TDP1P38319 YAL019W-AYAL019W-A 570 nt6.51□□□□□ -1.37
TDP1P38319 HST2YPL015C 1074 nt6.51□□□□□ -1.37
TDP1P38319 snR30snR30 606 nt6.51□□□□□ -1.37
TDP1P38319 tG(GCC)BtG(GCC)B 71 nt6.5□□□□□ -1.37
TDP1P38319 SUF16tG(GCC)C 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)D1tG(GCC)D1 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)D2tG(GCC)D2 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)EtG(GCC)E 71 nt6.5□□□□□ -1.37
TDP1P38319 SUF20tG(GCC)F1 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)F2tG(GCC)F2 71 nt6.5□□□□□ -1.37
TDP1P38319 tG(GCC)G1tG(GCC)G1 71 nt6.5□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms