Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MYO9B-207ENST00000595641 6215 ntTSL 510.91□□□□□ -0.663e-6■□□□□ 9.3
SRSF1Q07955 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.673e-6■□□□□ 9.3
SRSF1Q07955 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC10.84□□□□□ -0.675e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-336ENST00000631189 1156 ntTSL 510.65□□□□□ -0.73e-6■□□□□ 9.3
SRSF1Q07955 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC10.49□□□□□ -0.733e-6■□□□□ 9.3
SRSF1Q07955 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.44□□□□□ -0.743e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-225ENST00000594715 729 ntTSL 510.4□□□□□ -0.743e-6■□□□□ 9.3
SRSF1Q07955 LARS-206ENST00000505223 582 ntTSL 310.34□□□□□ -0.753e-6■□□□□ 9.3
SRSF1Q07955 CCDC84-205ENST00000528088 1482 ntTSL 210.19□□□□□ -0.783e-8■□□□□ 9.3
SRSF1Q07955 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.83e-6■□□□□ 9.3
SRSF1Q07955 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC9.84□□□□□ -0.833e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-216ENST00000451228 604 ntTSL 39.79□□□□□ -0.843e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-272ENST00000626569 857 ntTSL 5 BASIC9.78□□□□□ -0.843e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-278ENST00000626870 851 ntTSL 5 BASIC9.78□□□□□ -0.843e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-274ENST00000626617 1014 ntTSL 59.49□□□□□ -0.893e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-259ENST00000625776 911 ntTSL 59.48□□□□□ -0.893e-6■□□□□ 9.3
SRSF1Q07955 LYAR-202ENST00000452476 1468 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.895e-10■□□□□ 9.3
SRSF1Q07955 LARS-203ENST00000503654 534 ntTSL 49.4□□□□□ -0.93e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-275ENST00000626677 378 ntTSL 59.4□□□□□ -0.93e-6■□□□□ 9.3
SRSF1Q07955 LARS-216ENST00000618084 720 ntTSL 5 BASIC9.34□□□□□ -0.913e-6■□□□□ 9.3
SRSF1Q07955 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC9.29□□□□□ -0.923e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-327ENST00000630417 918 ntTSL 59.01□□□□□ -0.973e-6■□□□□ 9.3
SRSF1Q07955 CDK10-201ENST00000331006 3344 ntTSL 2 BASIC8.85□□□□□ -0.995e-6■□□□□ 9.3
SRSF1Q07955 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC8.82□□□□□ -13e-6■□□□□ 9.3
SRSF1Q07955 PRPF4B-206ENST00000481109 2364 ntTSL 1 (best)8.78□□□□□ -13e-6■□□□□ 9.3
SRSF1Q07955 DNMT1-223ENST00000591239 550 ntTSL 28.52□□□□□ -1.053e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-293ENST00000627562 1184 ntTSL 58.23□□□□□ -1.093e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-208ENST00000431767 486 ntTSL 58.04□□□□□ -1.123e-6■□□□□ 9.3
SRSF1Q07955 QSOX2-202ENST00000455222 851 ntTSL 57.61□□□□□ -1.193e-6■□□□□ 9.3
SRSF1Q07955 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.233e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-215ENST00000451216 405 ntTSL 57.34□□□□□ -1.233e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-288ENST00000627363 731 ntTSL 57.19□□□□□ -1.263e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-304ENST00000628301 772 ntTSL 57.08□□□□□ -1.283e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-317ENST00000629686 669 ntTSL 56.95□□□□□ -1.33e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-335ENST00000631105 702 ntTSL 56.45□□□□□ -1.383e-6■□□□□ 9.3
SRSF1Q07955 STXBP5-202ENST00000367475 521 ntTSL 56.29□□□□□ -1.43e-6■□□□□ 9.3
SRSF1Q07955 PRPF4B-203ENST00000463634 2590 ntTSL 56.26□□□□□ -1.413e-6■□□□□ 9.3
SRSF1Q07955 LBR-204ENST00000424022 478 ntTSL 35.96□□□□□ -1.463e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-308ENST00000628547 882 ntTSL 55.89□□□□□ -1.473e-6■□□□□ 9.3
SRSF1Q07955 LINC00969-250ENST00000615493 712 ntTSL 55.8□□□□□ -1.483e-6■□□□□ 9.3
SRSF1Q07955 SMARCC1-202ENST00000425518 3827 ntTSL 25.77□□□□□ -1.493e-6■□□□□ 9.3
SRSF1Q07955 PRPF4B-202ENST00000461612 629 ntTSL 24.8□□□□□ -1.643e-6■□□□□ 9.3
SRSF1Q07955 STXBP5-205ENST00000392291 791 ntTSL 54.74□□□□□ -1.653e-6■□□□□ 9.3
SRSF1Q07955 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.933e-6■□□□□ 9.3
SRSF1Q07955 PIM3-202ENST00000467480 723 ntTSL 229.77■■■□□ 2.365e-7■□□□□ 9.3
SRSF1Q07955 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.35■■□□□ 1.015e-7■□□□□ 9.3
SRSF1Q07955 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.475e-7■□□□□ 9.3
SRSF1Q07955 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.445e-7■□□□□ 9.3
SRSF1Q07955 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.09■□□□□ 0.335e-7■□□□□ 9.3
SRSF1Q07955 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.51□□□□□ -0.095e-7■□□□□ 9.3
SRSF1Q07955 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.185e-7■□□□□ 9.3
SRSF1Q07955 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.75□□□□□ -0.215e-7■□□□□ 9.3
SRSF1Q07955 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.33□□□□□ -0.285e-7■□□□□ 9.3
SRSF1Q07955 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC12.38□□□□□ -0.435e-7■□□□□ 9.3
SRSF1Q07955 ZFP91-CNTF-202ENST00000422974 1788 ntAPPRIS ALT2 TSL 59.37□□□□□ -0.915e-7■□□□□ 9.3
SRSF1Q07955 DIP2A-210ENST00000480553 1906 ntTSL 29.26□□□□□ -0.935e-7■□□□□ 9.3
SRSF1Q07955 ATP2A2-207ENST00000548169 2951 ntTSL 27.74□□□□□ -1.175e-7■□□□□ 9.3
SRSF1Q07955 SARS-204ENST00000471705 851 ntTSL 27.32□□□□□ -1.245e-7■□□□□ 9.3
SRSF1Q07955 ATP2A2-202ENST00000313432 5575 ntTSL 1 (best)7.25□□□□□ -1.255e-7■□□□□ 9.3
SRSF1Q07955 ATP2A2-212ENST00000553144 264 ntTSL 1 (best)4.15□□□□□ -1.755e-7■□□□□ 9.3
SRSF1Q07955 UBXN4-208ENST00000490163 3394 ntTSL 22.97□□□□□ -1.935e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-214ENST00000467660 1203 ntTSL 1 (best)21.38■■□□□ 1.013e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-215ENST00000472526 651 ntTSL 520.57■□□□□ 0.883e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-206ENST00000405286 1048 ntTSL 320.5■□□□□ 0.873e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-218ENST00000482576 558 ntTSL 220.24■□□□□ 0.833e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-201ENST00000255830 1436 ntTSL 1 (best)19.72■□□□□ 0.753e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.11■□□□□ 0.653e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-220ENST00000489322 2406 ntTSL 214.69□□□□□ -0.063e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.18□□□□□ -0.143e-7■□□□□ 9.3
SRSF1Q07955 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.163e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-207ENST00000405340 2748 ntTSL 513.69□□□□□ -0.223e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-216ENST00000473357 2787 ntTSL 213.14□□□□□ -0.313e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-213ENST00000461809 3054 ntTSL 512.21□□□□□ -0.463e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.573e-7■□□□□ 9.3
SRSF1Q07955 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.31□□□□□ -0.63e-7■□□□□ 9.3
SRSF1Q07955 DDIT4-203ENST00000473155 753 ntTSL 1 (best)20.06■□□□□ 0.81e-8■□□□□ 9.3
SRSF1Q07955 OGT-205ENST00000459760 541 ntTSL 54.01□□□□□ -1.775e-9■□□□□ 9.3
SRSF1Q07955 COL18A1-206ENST00000459895 588 ntTSL 311.59□□□□□ -0.554e-8■□□□□ 9.3
SRSF1Q07955 SRSF2-206ENST00000582449 1518 ntTSL 218.95■□□□□ 0.622e-26■□□□□ 9.3
SRSF1Q07955 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.08■□□□□ 0.162e-26■□□□□ 9.3
SRSF1Q07955 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.132e-26■□□□□ 9.3
SRSF1Q07955 SRSF2-204ENST00000452355 1357 ntTSL 514.94□□□□□ -0.022e-26■□□□□ 9.3
SRSF1Q07955 SRSF2-208ENST00000585202 1359 ntTSL 313.96□□□□□ -0.182e-26■□□□□ 9.3
SRSF1Q07955 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.532e-26■□□□□ 9.3
SRSF1Q07955 SRSF2-210ENST00000589919 595 ntTSL 27.08□□□□□ -1.282e-26■□□□□ 9.3
SRSF1Q07955 SRSF2-211ENST00000592676 559 ntTSL 35□□□□□ -1.612e-26■□□□□ 9.3
SRSF1Q07955 SRSF2-209ENST00000586778 1001 ntTSL 24.49□□□□□ -1.692e-26■□□□□ 9.3
SRSF1Q07955 CBLB-208ENST00000447441 944 ntTSL 219.47■□□□□ 0.711e-7■□□□□ 9.3
SRSF1Q07955 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.311e-7■□□□□ 9.3
SRSF1Q07955 PSPH-207ENST00000421626 826 ntTSL 416.82■□□□□ 0.281e-7■□□□□ 9.3
SRSF1Q07955 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.171e-7■□□□□ 9.3
SRSF1Q07955 PSPH-204ENST00000416592 739 ntTSL 515.84■□□□□ 0.131e-7■□□□□ 9.3
SRSF1Q07955 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.66□□□□□ -0.061e-7■□□□□ 9.3
SRSF1Q07955 PSPH-206ENST00000421312 633 ntTSL 514.66□□□□□ -0.061e-7■□□□□ 9.3
SRSF1Q07955 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.66□□□□□ -0.061e-7■□□□□ 9.3
SRSF1Q07955 PSPH-209ENST00000427797 809 ntTSL 314.19□□□□□ -0.141e-7■□□□□ 9.3
SRSF1Q07955 PSPH-205ENST00000419984 744 ntTSL 313.17□□□□□ -0.31e-7■□□□□ 9.3
SRSF1Q07955 PSPH-203ENST00000413218 539 ntTSL 413.06□□□□□ -0.321e-7■□□□□ 9.3
SRSF1Q07955 PSPH-208ENST00000424596 555 ntTSL 412.63□□□□□ -0.391e-7■□□□□ 9.3
SRSF1Q07955 PSPH-212ENST00000472276 572 ntTSL 412.35□□□□□ -0.431e-7■□□□□ 9.3
Retrieved 100 of 14,836 protein–RNA pairs in 289.1 ms