Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC28.5■■■□□ 2.15
PPARGC1BQ86YN6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
PPARGC1BQ86YN6 ABALON-201ENST00000629058 1903 ntBASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 STARP1-201ENST00000397973 869 ntBASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 MIR1224-201ENST00000408193 85 ntBASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 AC010331.1-201ENST00000611423 582 ntBASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 AC083849.1-201ENST00000615227 514 ntBASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPARGC1BQ86YN6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 AL096828.2-201ENST00000567259 1965 ntBASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC28.48■■■□□ 2.15
PPARGC1BQ86YN6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 GMCL1P1-201ENST00000463439 1581 ntBASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 KRT18P35-201ENST00000510488 1269 ntBASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 AL031432.5-201ENST00000641059 760 ntBASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
PPARGC1BQ86YN6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 POR-209ENST00000439269 1858 ntTSL 2 BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
PPARGC1BQ86YN6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC28.46■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms