Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 CIA1YDR267C 993 nt6.69□□□□□ -1.34
PRP38Q00723 RPL2BYIL018W 765 nt6.69□□□□□ -1.34
PRP38Q00723 snR30snR30 606 nt6.69□□□□□ -1.34
PRP38Q00723 FCP1YMR277W 2199 nt6.68□□□□□ -1.34
PRP38Q00723 NAF1YNL124W 1479 nt6.68□□□□□ -1.34
PRP38Q00723 NTG2YOL043C 1143 nt6.68□□□□□ -1.34
PRP38Q00723 PAC2YER007W 1557 nt6.68□□□□□ -1.34
PRP38Q00723 RQC1YDR333C 2172 nt6.68□□□□□ -1.34
PRP38Q00723 YJR154WYJR154W 1041 nt6.67□□□□□ -1.34
PRP38Q00723 YNR005CYNR005C 405 nt6.67□□□□□ -1.34
PRP38Q00723 HTZ1YOL012C 405 nt6.67□□□□□ -1.34
PRP38Q00723 LGE1YPL055C 999 nt6.67□□□□□ -1.34
PRP38Q00723 YEN1YER041W 2280 nt6.65□□□□□ -1.34
PRP38Q00723 CIR2YOR356W 1896 nt6.65□□□□□ -1.34
PRP38Q00723 REC107YJR021C 945 nt6.65□□□□□ -1.34
PRP38Q00723 SPG5YMR191W 1122 nt6.65□□□□□ -1.34
PRP38Q00723 ZIM17YNL310C 525 nt6.65□□□□□ -1.34
PRP38Q00723 SPE3YPR069C 882 nt6.65□□□□□ -1.34
PRP38Q00723 YCL049CYCL049C 939 nt6.65□□□□□ -1.34
PRP38Q00723 HXT13YEL069C 1695 nt6.65□□□□□ -1.35
PRP38Q00723 YOR389WYOR389W 1875 nt6.64□□□□□ -1.35
PRP38Q00723 RGD2YFL047W 2145 nt6.64□□□□□ -1.35
PRP38Q00723 COX16YJL003W 357 nt6.64□□□□□ -1.35
PRP38Q00723 SML1YML058W 315 nt6.64□□□□□ -1.35
PRP38Q00723 YNR014WYNR014W 639 nt6.64□□□□□ -1.35
PRP38Q00723 VBA5YKR105C 1749 nt6.64□□□□□ -1.35
PRP38Q00723 CDC13YDL220C 2775 nt6.63□□□□□ -1.35
PRP38Q00723 URH1YDR400W 1023 nt6.63□□□□□ -1.35
PRP38Q00723 TRS31YDR472W 852 nt6.63□□□□□ -1.35
PRP38Q00723 PTC7YHR076W 1032 nt6.63□□□□□ -1.35
PRP38Q00723 YLR162WYLR162W 357 nt6.63□□□□□ -1.35
PRP38Q00723 RPL31BYLR406C 342 nt6.63□□□□□ -1.35
PRP38Q00723 SLA2YNL243W 2907 nt6.63□□□□□ -1.35
PRP38Q00723 ASN2YGR124W 1719 nt6.62□□□□□ -1.35
PRP38Q00723 NMD5YJR132W 3147 nt6.62□□□□□ -1.35
PRP38Q00723 APE4YHR113W 1473 nt6.62□□□□□ -1.35
PRP38Q00723 YIP4YGL198W 708 nt6.62□□□□□ -1.35
PRP38Q00723 CBR1YIL043C 855 nt6.62□□□□□ -1.35
PRP38Q00723 PUS4YNL292W 1212 nt6.62□□□□□ -1.35
PRP38Q00723 UBP13YBL067C 2244 nt6.62□□□□□ -1.35
PRP38Q00723 PLB3YOL011W 2061 nt6.62□□□□□ -1.35
PRP38Q00723 YLL066CYLL066C 3618 nt6.61□□□□□ -1.35
PRP38Q00723 YFL013W-AYFL013W-A 804 nt6.61□□□□□ -1.35
PRP38Q00723 ERG10YPL028W 1197 nt6.61□□□□□ -1.35
PRP38Q00723 YMR034CYMR034C 1305 nt6.6□□□□□ -1.35
PRP38Q00723 PPH22YDL188C 1134 nt6.6□□□□□ -1.35
PRP38Q00723 TRR1YDR353W 960 nt6.6□□□□□ -1.35
PRP38Q00723 OPI11YPR044C 354 nt6.6□□□□□ -1.35
PRP38Q00723 SSC1YJR045C 1965 nt6.59□□□□□ -1.35
PRP38Q00723 YOS9YDR057W 1629 nt6.59□□□□□ -1.35
PRP38Q00723 YDL177CYDL177C 513 nt6.59□□□□□ -1.35
PRP38Q00723 RRN10YBL025W 438 nt6.59□□□□□ -1.35
PRP38Q00723 YOR111WYOR111W 699 nt6.59□□□□□ -1.35
PRP38Q00723 YLL058WYLL058W 1728 nt6.59□□□□□ -1.36
PRP38Q00723 MRPS28YDR337W 861 nt6.58□□□□□ -1.36
PRP38Q00723 MEU1YLR017W 1014 nt6.58□□□□□ -1.36
PRP38Q00723 SMX3YPR182W 261 nt6.58□□□□□ -1.36
PRP38Q00723 ADE17YMR120C 1779 nt6.57□□□□□ -1.36
PRP38Q00723 YGL102CYGL102C 429 nt6.57□□□□□ -1.36
PRP38Q00723 YSC83YHR017W 1158 nt6.57□□□□□ -1.36
PRP38Q00723 RPL5YPL131W 894 nt6.57□□□□□ -1.36
PRP38Q00723 SMK1YPR054W 1167 nt6.57□□□□□ -1.36
PRP38Q00723 PRP2YNR011C 2631 nt6.57□□□□□ -1.36
PRP38Q00723 PEX31YGR004W 1389 nt6.57□□□□□ -1.36
PRP38Q00723 YJL163CYJL163C 1668 nt6.56□□□□□ -1.36
PRP38Q00723 COX15YER141W 1461 nt6.56□□□□□ -1.36
PRP38Q00723 MPH3YJR160C 1809 nt6.55□□□□□ -1.36
PRP38Q00723 DYS1YHR068W 1164 nt6.55□□□□□ -1.36
PRP38Q00723 PRI1YIR008C 1230 nt6.55□□□□□ -1.36
PRP38Q00723 GCN3YKR026C 918 nt6.55□□□□□ -1.36
PRP38Q00723 OPI8YKR035C 642 nt6.55□□□□□ -1.36
PRP38Q00723 IRC11YOR013W 471 nt6.55□□□□□ -1.36
PRP38Q00723 BIO3YNR058W 1443 nt6.55□□□□□ -1.36
PRP38Q00723 FCY22YER060W-A 1593 nt6.55□□□□□ -1.36
PRP38Q00723 TOS2YGR221C 1869 nt6.54□□□□□ -1.36
PRP38Q00723 LDB7YBL006C 543 nt6.54□□□□□ -1.36
PRP38Q00723 FIT2YOR382W 462 nt6.54□□□□□ -1.36
PRP38Q00723 YPR076WYPR076W 375 nt6.54□□□□□ -1.36
PRP38Q00723 ICP55YER078C 1536 nt6.54□□□□□ -1.36
PRP38Q00723 BIM1YER016W 1035 nt6.53□□□□□ -1.36
PRP38Q00723 YLL056CYLL056C 897 nt6.53□□□□□ -1.36
PRP38Q00723 MRPL19YNL185C 477 nt6.53□□□□□ -1.36
PRP38Q00723 YOL046CYOL046C 675 nt6.53□□□□□ -1.36
PRP38Q00723 CYS4YGR155W 1524 nt6.53□□□□□ -1.36
PRP38Q00723 MIP1YOR330C 3765 nt6.53□□□□□ -1.36
PRP38Q00723 YHR020WYHR020W 2067 nt6.53□□□□□ -1.36
PRP38Q00723 HSM3YBR272C 1443 nt6.52□□□□□ -1.37
PRP38Q00723 DPH5YLR172C 903 nt6.52□□□□□ -1.37
PRP38Q00723 MSC3YLR219W 2187 nt6.51□□□□□ -1.37
PRP38Q00723 HED1YDR014W-A 489 nt6.51□□□□□ -1.37
PRP38Q00723 tG(GCC)BtG(GCC)B 71 nt6.51□□□□□ -1.37
PRP38Q00723 SUF16tG(GCC)C 71 nt6.51□□□□□ -1.37
PRP38Q00723 tG(GCC)D1tG(GCC)D1 71 nt6.51□□□□□ -1.37
PRP38Q00723 tG(GCC)D2tG(GCC)D2 71 nt6.51□□□□□ -1.37
PRP38Q00723 tG(GCC)EtG(GCC)E 71 nt6.51□□□□□ -1.37
PRP38Q00723 SUF20tG(GCC)F1 71 nt6.51□□□□□ -1.37
PRP38Q00723 tG(GCC)F2tG(GCC)F2 71 nt6.51□□□□□ -1.37
PRP38Q00723 tG(GCC)G1tG(GCC)G1 71 nt6.51□□□□□ -1.37
PRP38Q00723 tG(GCC)G2tG(GCC)G2 71 nt6.51□□□□□ -1.37
PRP38Q00723 tG(GCC)J1tG(GCC)J1 71 nt6.51□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms