Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 TAH11YJR046W 1815 nt7.14□□□□□ -1.27
YNL040WP53960 LGE1YPL055C 999 nt7.14□□□□□ -1.27
YNL040WP53960 YJL163CYJL163C 1668 nt7.13□□□□□ -1.27
YNL040WP53960 YIP4YGL198W 708 nt7.13□□□□□ -1.27
YNL040WP53960 YDR306CYDR306C 1437 nt7.12□□□□□ -1.27
YNL040WP53960 YOL046CYOL046C 675 nt7.12□□□□□ -1.27
YNL040WP53960 SPE3YPR069C 882 nt7.12□□□□□ -1.27
YNL040WP53960 HBN1YCL026C-B 582 nt7.12□□□□□ -1.27
YNL040WP53960 YLL058WYLL058W 1728 nt7.12□□□□□ -1.27
YNL040WP53960 AAD14YNL331C 1131 nt7.11□□□□□ -1.27
YNL040WP53960 FIT2YOR382W 462 nt7.11□□□□□ -1.27
YNL040WP53960 ERG10YPL028W 1197 nt7.11□□□□□ -1.27
YNL040WP53960 ECM38YLR299W 1983 nt7.1□□□□□ -1.27
YNL040WP53960 YJL144WYJL144W 315 nt7.1□□□□□ -1.27
YNL040WP53960 REC107YJR021C 945 nt7.1□□□□□ -1.27
YNL040WP53960 YNR014WYNR014W 639 nt7.09□□□□□ -1.27
YNL040WP53960 SNU66YOR308C 1764 nt7.09□□□□□ -1.27
YNL040WP53960 PUS7YOR243C 2031 nt7.08□□□□□ -1.28
YNL040WP53960 VBA5YKR105C 1749 nt7.08□□□□□ -1.28
YNL040WP53960 SPG5YMR191W 1122 nt7.08□□□□□ -1.28
YNL040WP53960 OPI11YPR044C 354 nt7.08□□□□□ -1.28
YNL040WP53960 YPR076WYPR076W 375 nt7.08□□□□□ -1.28
YNL040WP53960 SLA2YNL243W 2907 nt7.08□□□□□ -1.28
YNL040WP53960 BIO3YNR058W 1443 nt7.08□□□□□ -1.28
YNL040WP53960 MPH3YJR160C 1809 nt7.08□□□□□ -1.28
YNL040WP53960 RSP5YER125W 2430 nt7.08□□□□□ -1.28
YNL040WP53960 RGD2YFL047W 2145 nt7.07□□□□□ -1.28
YNL040WP53960 HSP12YFL014W 330 nt7.07□□□□□ -1.28
YNL040WP53960 PUS4YNL292W 1212 nt7.07□□□□□ -1.28
YNL040WP53960 TUF1YOR187W 1314 nt7.06□□□□□ -1.28
YNL040WP53960 YGL102CYGL102C 429 nt7.06□□□□□ -1.28
YNL040WP53960 PTC7YHR076W 1032 nt7.06□□□□□ -1.28
YNL040WP53960 COX16YJL003W 357 nt7.06□□□□□ -1.28
YNL040WP53960 LDB7YBL006C 543 nt7.06□□□□□ -1.28
YNL040WP53960 MRPS28YDR337W 861 nt7.05□□□□□ -1.28
YNL040WP53960 AGX1YFL030W 1158 nt7.05□□□□□ -1.28
YNL040WP53960 RPL31BYLR406C 342 nt7.05□□□□□ -1.28
YNL040WP53960 ICP55YER078C 1536 nt7.05□□□□□ -1.28
YNL040WP53960 PLB3YOL011W 2061 nt7.04□□□□□ -1.28
YNL040WP53960 NUP49YGL172W 1419 nt7.04□□□□□ -1.28
YNL040WP53960 BDF2YDL070W 1917 nt7.04□□□□□ -1.28
YNL040WP53960 PRI1YIR008C 1230 nt7.04□□□□□ -1.28
YNL040WP53960 RDN5-2RDN5-2 119 nt7.04□□□□□ -1.28
YNL040WP53960 RDN5-3RDN5-3 119 nt7.04□□□□□ -1.28
YNL040WP53960 RDN5-4RDN5-4 119 nt7.04□□□□□ -1.28
YNL040WP53960 RDN5-5RDN5-5 119 nt7.04□□□□□ -1.28
YNL040WP53960 RPL5YPL131W 894 nt7.04□□□□□ -1.28
YNL040WP53960 SKY1YMR216C 2229 nt7.04□□□□□ -1.28
YNL040WP53960 COX15YER141W 1461 nt7.04□□□□□ -1.28
YNL040WP53960 PPH21YDL134C 1110 nt7.03□□□□□ -1.28
YNL040WP53960 TRS31YDR472W 852 nt7.03□□□□□ -1.28
YNL040WP53960 DYS1YHR068W 1164 nt7.03□□□□□ -1.28
YNL040WP53960 YLL056CYLL056C 897 nt7.03□□□□□ -1.28
YNL040WP53960 SMX3YPR182W 261 nt7.03□□□□□ -1.28
YNL040WP53960 Q0010Q0010 387 nt7.03□□□□□ -1.28
YNL040WP53960 MSC3YLR219W 2187 nt7.03□□□□□ -1.28
YNL040WP53960 PAC2YER007W 1557 nt7.02□□□□□ -1.29
YNL040WP53960 CTF8YHR191C 402 nt7.01□□□□□ -1.29
YNL040WP53960 CBR1YIL043C 855 nt7.01□□□□□ -1.29
YNL040WP53960 OPI8YKR035C 642 nt7.01□□□□□ -1.29
YNL040WP53960 ASR1YPR093C 867 nt7.01□□□□□ -1.29
YNL040WP53960 PEX31YGR004W 1389 nt7□□□□□ -1.29
YNL040WP53960 PPH22YDL188C 1134 nt7□□□□□ -1.29
YNL040WP53960 URH1YDR400W 1023 nt7□□□□□ -1.29
YNL040WP53960 CMK2YOL016C 1344 nt7□□□□□ -1.29
YNL040WP53960 HOC1YJR075W 1191 nt6.99□□□□□ -1.29
YNL040WP53960 MRPL19YNL185C 477 nt6.99□□□□□ -1.29
YNL040WP53960 YOR111WYOR111W 699 nt6.99□□□□□ -1.29
YNL040WP53960 SEC62YPL094C 825 nt6.99□□□□□ -1.29
YNL040WP53960 AGP2YBR132C 1791 nt6.97□□□□□ -1.29
YNL040WP53960 LIA1YJR070C 978 nt6.97□□□□□ -1.29
YNL040WP53960 ECM27YJR106W 2178 nt6.97□□□□□ -1.29
YNL040WP53960 ACO1YLR304C 2337 nt6.97□□□□□ -1.29
YNL040WP53960 FMP40YPL222W 2067 nt6.97□□□□□ -1.29
YNL040WP53960 CLN1YMR199W 1641 nt6.97□□□□□ -1.29
YNL040WP53960 YMR034CYMR034C 1305 nt6.97□□□□□ -1.29
YNL040WP53960 CYS4YGR155W 1524 nt6.96□□□□□ -1.29
YNL040WP53960 YSC83YHR017W 1158 nt6.96□□□□□ -1.3
YNL040WP53960 ECM30YLR436C 3825 nt6.96□□□□□ -1.3
YNL040WP53960 SUR7YML052W 909 nt6.96□□□□□ -1.3
YNL040WP53960 MIP1YOR330C 3765 nt6.96□□□□□ -1.3
YNL040WP53960 ARP3YJR065C 1350 nt6.95□□□□□ -1.3
YNL040WP53960 YDL177CYDL177C 513 nt6.95□□□□□ -1.3
YNL040WP53960 SWD1YAR003W 1281 nt6.94□□□□□ -1.3
YNL040WP53960 TMA46YOR091W 1038 nt6.94□□□□□ -1.3
YNL040WP53960 CRH1YGR189C 1524 nt6.94□□□□□ -1.3
YNL040WP53960 FCY22YER060W-A 1593 nt6.94□□□□□ -1.3
YNL040WP53960 HED1YDR014W-A 489 nt6.93□□□□□ -1.3
YNL040WP53960 VTS1YOR359W 1572 nt6.93□□□□□ -1.3
YNL040WP53960 DOT1YDR440W 1749 nt6.93□□□□□ -1.3
YNL040WP53960 GLN3YER040W 2193 nt6.92□□□□□ -1.3
YNL040WP53960 GPD1YDL022W 1176 nt6.92□□□□□ -1.3
YNL040WP53960 YFL013W-AYFL013W-A 804 nt6.92□□□□□ -1.3
YNL040WP53960 YKL018C-AYKL018C-A 300 nt6.92□□□□□ -1.3
YNL040WP53960 YKL077WYKL077W 1179 nt6.92□□□□□ -1.3
YNL040WP53960 YBR113WYBR113W 483 nt6.92□□□□□ -1.3
YNL040WP53960 YHR020WYHR020W 2067 nt6.92□□□□□ -1.3
YNL040WP53960 EMP65YER140W 1671 nt6.91□□□□□ -1.3
YNL040WP53960 FPR2YDR519W 408 nt6.91□□□□□ -1.3
YNL040WP53960 SRY1YKL218C 981 nt6.91□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 76.5 ms