Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 PVRIG2P-201ENST00000435460 978 ntBASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 LINC00265-3P-201ENST00000447588 903 ntBASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 MIR3180-1-201ENST00000580374 94 ntBASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 MIR3180-3-201ENST00000584616 94 ntBASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 AC005332.3-201ENST00000589904 676 ntBASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAP47Q5SQN1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 TPM4P1-201ENST00000436100 807 ntBASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 AP000867.3-201ENST00000524675 377 ntBASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SNAP47Q5SQN1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAP47Q5SQN1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAP47Q5SQN1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms