Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Zc3h3Q8CHP0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.01■■□□□ 1.27
Zc3h3Q8CHP0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Zc3h3Q8CHP0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Zc3h3Q8CHP0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Zc3h3Q8CHP0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Zc3h3Q8CHP0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Zc3h3Q8CHP0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Zc3h3Q8CHP0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Zc3h3Q8CHP0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Zc3h3Q8CHP0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Zc3h3Q8CHP0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Zc3h3Q8CHP0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.99■■□□□ 1.27
Zc3h3Q8CHP0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Zc3h3Q8CHP0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Zc3h3Q8CHP0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.99■■□□□ 1.27
Zc3h3Q8CHP0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Zc3h3Q8CHP0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Zc3h3Q8CHP0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
Zc3h3Q8CHP0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Zc3h3Q8CHP0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Zc3h3Q8CHP0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Zc3h3Q8CHP0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Zc3h3Q8CHP0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Zc3h3Q8CHP0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.97■■□□□ 1.27
Zc3h3Q8CHP0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Zc3h3Q8CHP0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.96■■□□□ 1.27
Zc3h3Q8CHP0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.96■■□□□ 1.27
Zc3h3Q8CHP0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Zc3h3Q8CHP0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.94■■□□□ 1.26
Zc3h3Q8CHP0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Zc3h3Q8CHP0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Zc3h3Q8CHP0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Zc3h3Q8CHP0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.93■■□□□ 1.26
Zc3h3Q8CHP0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Zc3h3Q8CHP0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Zc3h3Q8CHP0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Zc3h3Q8CHP0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.92■■□□□ 1.26
Zc3h3Q8CHP0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h3Q8CHP0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h3Q8CHP0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.9■■□□□ 1.26
Zc3h3Q8CHP0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Zc3h3Q8CHP0 Etf1-202ENSMUST00000180351 108 ntBASIC22.88■■□□□ 1.25
Zc3h3Q8CHP0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h3Q8CHP0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h3Q8CHP0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Zc3h3Q8CHP0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Zc3h3Q8CHP0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h3Q8CHP0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Zc3h3Q8CHP0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h3Q8CHP0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h3Q8CHP0 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.86■■□□□ 1.25
Zc3h3Q8CHP0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h3Q8CHP0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Zc3h3Q8CHP0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Zc3h3Q8CHP0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.84■■□□□ 1.25
Zc3h3Q8CHP0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Zc3h3Q8CHP0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Zc3h3Q8CHP0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Zc3h3Q8CHP0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Zc3h3Q8CHP0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Zc3h3Q8CHP0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
Zc3h3Q8CHP0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Zc3h3Q8CHP0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Zc3h3Q8CHP0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Zc3h3Q8CHP0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Zc3h3Q8CHP0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Zc3h3Q8CHP0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Zc3h3Q8CHP0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.82■■□□□ 1.24
Zc3h3Q8CHP0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.82■■□□□ 1.24
Zc3h3Q8CHP0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.82■■□□□ 1.24
Zc3h3Q8CHP0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Zc3h3Q8CHP0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Zc3h3Q8CHP0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.81■■□□□ 1.24
Zc3h3Q8CHP0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Zc3h3Q8CHP0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Zc3h3Q8CHP0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Zc3h3Q8CHP0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Zc3h3Q8CHP0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Zc3h3Q8CHP0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Zc3h3Q8CHP0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Zc3h3Q8CHP0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Zc3h3Q8CHP0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Zc3h3Q8CHP0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.77■■□□□ 1.24
Zc3h3Q8CHP0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Zc3h3Q8CHP0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Zc3h3Q8CHP0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Zc3h3Q8CHP0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Zc3h3Q8CHP0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Zc3h3Q8CHP0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Zc3h3Q8CHP0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Zc3h3Q8CHP0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Zc3h3Q8CHP0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Zc3h3Q8CHP0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Zc3h3Q8CHP0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zc3h3Q8CHP0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Zc3h3Q8CHP0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zc3h3Q8CHP0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zc3h3Q8CHP0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zc3h3Q8CHP0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms