Protein–RNA interactions for Protein: Q53H54

TRMT12, tRNA wybutosine-synthesizing protein 2 homolog, humanhuman

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12Q53H54 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.23■□□□□ 0.35
TRMT12Q53H54 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.23■□□□□ 0.35
TRMT12Q53H54 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.23■□□□□ 0.35
TRMT12Q53H54 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.23■□□□□ 0.35
TRMT12Q53H54 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.23■□□□□ 0.35
TRMT12Q53H54 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.23■□□□□ 0.35
TRMT12Q53H54 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.23■□□□□ 0.35
TRMT12Q53H54 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRMT12Q53H54 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRMT12Q53H54 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.22■□□□□ 0.35
TRMT12Q53H54 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRMT12Q53H54 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRMT12Q53H54 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 SDHAP2-201ENST00000455183 2001 ntBASIC17.21■□□□□ 0.35
TRMT12Q53H54 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 BICD1-207ENST00000551848 1962 ntBASIC17.21■□□□□ 0.35
TRMT12Q53H54 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 AC010240.3-201ENST00000607688 395 ntBASIC17.21■□□□□ 0.35
TRMT12Q53H54 AL023973.1-201ENST00000624619 620 ntBASIC17.21■□□□□ 0.35
TRMT12Q53H54 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 AC135050.7-201ENST00000624508 2218 ntBASIC17.21■□□□□ 0.35
TRMT12Q53H54 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRMT12Q53H54 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRMT12Q53H54 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRMT12Q53H54 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
TRMT12Q53H54 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.21■□□□□ 0.34
TRMT12Q53H54 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms