Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 KRT8P7-201ENST00000533003 1432 ntBASIC17.87■□□□□ 0.45
KRT78Q8N1N4 AL499627.1-201ENST00000569373 2188 ntBASIC17.87■□□□□ 0.45
KRT78Q8N1N4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 AC126763.1-201ENST00000552015 2118 ntBASIC17.86■□□□□ 0.45
KRT78Q8N1N4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 KRT18P22-201ENST00000402024 1347 ntBASIC17.86■□□□□ 0.45
KRT78Q8N1N4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 MYLKP1-201ENST00000509077 1580 ntBASIC17.86■□□□□ 0.45
KRT78Q8N1N4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT78Q8N1N4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 HMGA1P5-201ENST00000412453 271 ntBASIC17.85■□□□□ 0.45
KRT78Q8N1N4 AC087499.1-201ENST00000418141 1075 ntBASIC17.85■□□□□ 0.45
KRT78Q8N1N4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
KRT78Q8N1N4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 INGX-201ENST00000359239 846 ntBASIC17.84■□□□□ 0.45
KRT78Q8N1N4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.84■□□□□ 0.45
KRT78Q8N1N4 ECEL1P2-202ENST00000465689 757 ntBASIC17.84■□□□□ 0.45
KRT78Q8N1N4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms