Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 KRT8P45-201ENST00000414328 1447 ntBASIC17.93■□□□□ 0.46
KRT78Q8N1N4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 AC007663.1-201ENST00000438948 1240 ntBASIC17.93■□□□□ 0.46
KRT78Q8N1N4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
KRT78Q8N1N4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 AC034236.2-201ENST00000606662 1610 ntBASIC17.92■□□□□ 0.46
KRT78Q8N1N4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.92■□□□□ 0.46
KRT78Q8N1N4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 MIR4674-201ENST00000582457 87 ntBASIC17.92■□□□□ 0.46
KRT78Q8N1N4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 CYP2D8P-201ENST00000433633 1490 ntBASIC17.92■□□□□ 0.46
KRT78Q8N1N4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT78Q8N1N4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 KRT8P9-201ENST00000558927 1449 ntBASIC17.91■□□□□ 0.46
KRT78Q8N1N4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 AC010947.1-201ENST00000623454 693 ntBASIC17.91■□□□□ 0.46
KRT78Q8N1N4 PKD1P1-201ENST00000458669 6805 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms