Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.16■□□□□ 0.18
SFTPBP07988 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.16■□□□□ 0.18
SFTPBP07988 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SFTPBP07988 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
SFTPBP07988 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.16■□□□□ 0.18
SFTPBP07988 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SFTPBP07988 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SFTPBP07988 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.16■□□□□ 0.18
SFTPBP07988 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 TSPY23P-201ENST00000440136 739 ntBASIC16.16■□□□□ 0.18
SFTPBP07988 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.16■□□□□ 0.18
SFTPBP07988 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.16■□□□□ 0.18
SFTPBP07988 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.16■□□□□ 0.18
SFTPBP07988 AC113410.3-201ENST00000623366 203 ntBASIC16.16■□□□□ 0.18
SFTPBP07988 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.16■□□□□ 0.18
SFTPBP07988 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.16■□□□□ 0.18
SFTPBP07988 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SFTPBP07988 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.16■□□□□ 0.18
SFTPBP07988 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SFTPBP07988 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SFTPBP07988 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SFTPBP07988 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.15■□□□□ 0.18
SFTPBP07988 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SFTPBP07988 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.15■□□□□ 0.18
SFTPBP07988 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SFTPBP07988 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SFTPBP07988 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.15■□□□□ 0.18
SFTPBP07988 AP001412.1-201ENST00000608405 714 ntBASIC16.15■□□□□ 0.18
SFTPBP07988 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SFTPBP07988 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.15■□□□□ 0.18
SFTPBP07988 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SFTPBP07988 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.15■□□□□ 0.18
SFTPBP07988 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.15■□□□□ 0.18
SFTPBP07988 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.15■□□□□ 0.18
SFTPBP07988 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.14■□□□□ 0.18
SFTPBP07988 KRT8P41-201ENST00000533985 1514 ntBASIC16.14■□□□□ 0.18
SFTPBP07988 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 AL133373.2-201ENST00000623187 2828 ntBASIC16.14■□□□□ 0.17
SFTPBP07988 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SFTPBP07988 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.14■□□□□ 0.17
SFTPBP07988 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.14■□□□□ 0.17
SFTPBP07988 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SFTPBP07988 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SFTPBP07988 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.14■□□□□ 0.17
SFTPBP07988 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.14■□□□□ 0.17
SFTPBP07988 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 AF186192.3-201ENST00000583427 947 ntBASIC16.14■□□□□ 0.17
SFTPBP07988 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.14■□□□□ 0.17
SFTPBP07988 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.14■□□□□ 0.17
SFTPBP07988 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.14■□□□□ 0.17
SFTPBP07988 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.14■□□□□ 0.17
SFTPBP07988 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.14■□□□□ 0.17
SFTPBP07988 AC135050.7-201ENST00000624508 2218 ntBASIC16.14■□□□□ 0.17
SFTPBP07988 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SFTPBP07988 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.14■□□□□ 0.17
SFTPBP07988 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms