Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 AP003041.3-201ENST00000527151 707 ntBASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 AL023803.3-201ENST00000615559 522 ntBASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 RCC2P3-201ENST00000418112 1537 ntBASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PPARGC1BQ86YN6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 AC068880.1-201ENST00000507289 2297 ntBASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 ECEL1P3-201ENST00000427961 737 ntBASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 NFYC-AS1-201ENST00000606277 1687 ntBASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
PPARGC1BQ86YN6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC29.32■■■□□ 2.28
PPARGC1BQ86YN6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 AC067852.2-201ENST00000590513 2313 ntBASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC29.31■■■□□ 2.28
PPARGC1BQ86YN6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 MTMR9LP-203ENST00000426597 1545 ntBASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 AC007663.1-201ENST00000438948 1240 ntBASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 NAPSB-206ENST00000562112 1266 ntBASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 AC139713.2-201ENST00000641328 2723 ntBASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PPARGC1BQ86YN6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPARGC1BQ86YN6 KRT8P3-201ENST00000519669 1449 ntBASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms