Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 RCC2P3-201ENST00000418112 1537 ntBASIC16.31■□□□□ 0.2
CDH20Q9HBT6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.31■□□□□ 0.2
CDH20Q9HBT6 ECEL1P2-202ENST00000465689 757 ntBASIC16.31■□□□□ 0.2
CDH20Q9HBT6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 AC145285.6-201ENST00000604632 637 ntBASIC16.31■□□□□ 0.2
CDH20Q9HBT6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH20Q9HBT6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 HMGA1P5-201ENST00000412453 271 ntBASIC16.3■□□□□ 0.2
CDH20Q9HBT6 AC211429.1-201ENST00000415277 523 ntBASIC16.3■□□□□ 0.2
CDH20Q9HBT6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 AC008622.2-201ENST00000617006 1229 ntBASIC16.3■□□□□ 0.2
CDH20Q9HBT6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 AC083906.6-201ENST00000641366 219 ntBASIC16.3■□□□□ 0.2
CDH20Q9HBT6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH20Q9HBT6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 AL023284.2-201ENST00000405850 579 ntBASIC16.29■□□□□ 0.2
CDH20Q9HBT6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 LIN28AP1-201ENST00000429574 405 ntBASIC16.29■□□□□ 0.2
CDH20Q9HBT6 AL512604.3-201ENST00000569583 964 ntBASIC16.29■□□□□ 0.2
CDH20Q9HBT6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH20Q9HBT6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms